EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000109749 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-162i8.7
Alias: -
Full Name: si:ch211-162i8.7
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2930 bases
Position: chr4:45441669-45444598
Accession: ZDB-GENE-110914-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000125267	zf-C2H2	PF00096.26	1.7e-48	1	7
ENSDARP00000125267	zf-C2H2	PF00096.26	1.7e-48	2	7
ENSDARP00000125267	zf-C2H2	PF00096.26	1.7e-48	3	7
ENSDARP00000125267	zf-C2H2	PF00096.26	1.7e-48	4	7
ENSDARP00000125267	zf-C2H2	PF00096.26	1.7e-48	5	7
ENSDARP00000125267	zf-C2H2	PF00096.26	1.7e-48	6	7
ENSDARP00000125267	zf-C2H2	PF00096.26	1.7e-48	7	7
ENSDARP00000125267	zf-met	PF12874.7	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000150745	-	1171	-	ENSDARP00000125267	282 (aa)	-	H0WEI9

Gene Model

Click here to download ENSDARG00000109749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000109749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000109749	si:ch211-162i8.7	84	74.419	ENSDARG00000110852	znf1111	88	79.372
ENSDARG00000109749	si:ch211-162i8.7	84	77.215	ENSDARG00000100001	znf1096	85	77.333
ENSDARG00000109749	si:ch211-162i8.7	80	66.272	ENSDARG00000089947	BX005085.1	89	71.111
ENSDARG00000109749	si:ch211-162i8.7	77	65.741	ENSDARG00000078281	zgc:173575	90	65.919
ENSDARG00000109749	si:ch211-162i8.7	78	79.545	ENSDARG00000100961	zgc:174653	84	79.808
ENSDARG00000109749	si:ch211-162i8.7	84	75.105	ENSDARG00000087168	si:ch211-162i8.4	86	76.444
ENSDARG00000109749	si:ch211-162i8.7	83	74.658	ENSDARG00000113011	zgc:113102	88	74.150
ENSDARG00000109749	si:ch211-162i8.7	80	80.444	ENSDARG00000113626	znf976	87	80.444
ENSDARG00000109749	si:ch211-162i8.7	88	80.000	ENSDARG00000114396	znf1017	87	70.248
ENSDARG00000109749	si:ch211-162i8.7	90	79.104	ENSDARG00000111465	znf1104	100	79.104
ENSDARG00000109749	si:ch211-162i8.7	79	69.955	ENSDARG00000111506	BX470259.1	71	69.955
ENSDARG00000109749	si:ch211-162i8.7	79	58.482	ENSDARG00000100587	zgc:113886	86	72.093
ENSDARG00000109749	si:ch211-162i8.7	81	77.193	ENSDARG00000104887	znf1105	80	77.315
ENSDARG00000109749	si:ch211-162i8.7	77	76.119	ENSDARG00000094484	si:ch211-162i8.4	97	77.600
ENSDARG00000109749	si:ch211-162i8.7	72	74.757	ENSDARG00000100568	si:ch211-209j12.3	100	74.757
ENSDARG00000109749	si:ch211-162i8.7	80	74.667	ENSDARG00000101463	si:dkey-176f19.1	85	74.667
ENSDARG00000109749	si:ch211-162i8.7	88	76.371	ENSDARG00000093041	si:ch211-234c11.2	88	77.778
ENSDARG00000109749	si:ch211-162i8.7	90	67.816	ENSDARG00000109255	si:ch211-234c11.2	88	68.675

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000109749	si:ch211-162i8.7	72	53.333	ENSAPOG00000022267	-	56	53.333	Acanthochromis_polyacanthus
ENSDARG00000109749	si:ch211-162i8.7	71	53.409	ENSACIG00000009809	si:dkey-77f5.14	78	53.409	Amphilophus_citrinellus
ENSDARG00000109749	si:ch211-162i8.7	75	51.087	ENSACIG00000009755	-	76	51.087	Amphilophus_citrinellus
ENSDARG00000109749	si:ch211-162i8.7	76	50.568	ENSACIG00000009780	-	69	50.568	Amphilophus_citrinellus
ENSDARG00000109749	si:ch211-162i8.7	86	53.968	ENSAOCG00000012829	-	50	53.968	Amphiprion_ocellaris
ENSDARG00000109749	si:ch211-162i8.7	86	53.968	ENSAPEG00000018316	-	50	53.968	Amphiprion_percula
ENSDARG00000109749	si:ch211-162i8.7	86	53.968	ENSAPEG00000018332	-	50	53.968	Amphiprion_percula
ENSDARG00000109749	si:ch211-162i8.7	76	48.663	ENSAPEG00000013113	-	51	48.663	Amphiprion_percula
ENSDARG00000109749	si:ch211-162i8.7	79	49.749	ENSATEG00000008320	-	76	49.756	Anabas_testudineus
ENSDARG00000109749	si:ch211-162i8.7	72	50.746	ENSACLG00000021045	-	75	50.746	Astatotilapia_calliptera
ENSDARG00000109749	si:ch211-162i8.7	74	52.885	ENSACLG00000006870	-	59	52.885	Astatotilapia_calliptera
ENSDARG00000109749	si:ch211-162i8.7	82	48.087	ENSCSEG00000004265	-	57	48.087	Cynoglossus_semilaevis
ENSDARG00000109749	si:ch211-162i8.7	73	61.745	ENSCVAG00000020745	-	97	52.913	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	77	59.494	ENSCVAG00000012620	-	96	59.494	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	78	50.568	ENSCVAG00000016898	-	95	50.568	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	84	55.155	ENSCVAG00000009827	-	97	55.155	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	72	55.779	ENSCVAG00000008836	-	61	54.938	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	87	49.038	ENSCVAG00000003417	-	66	49.038	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	74	48.421	ENSCVAG00000004382	-	86	48.421	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	74	51.316	ENSCVAG00000022174	-	56	52.381	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	78	57.143	ENSCVAG00000016964	-	96	57.143	Cyprinodon_variegatus
ENSDARG00000109749	si:ch211-162i8.7	71	58.163	ENSFHEG00000000766	-	50	58.163	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	77	56.452	ENSFHEG00000022186	-	91	54.167	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	72	59.195	ENSFHEG00000015612	-	57	59.195	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	73	55.497	ENSFHEG00000003462	-	62	55.497	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	72	58.000	ENSFHEG00000022145	-	52	58.000	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	73	51.462	ENSFHEG00000017523	-	69	51.462	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	72	64.286	ENSFHEG00000008518	-	69	64.286	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	71	62.778	ENSFHEG00000018255	-	94	62.778	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	71	50.000	ENSFHEG00000015748	-	99	50.000	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	83	55.963	ENSFHEG00000021815	-	54	55.963	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	76	51.643	ENSFHEG00000010878	-	65	51.643	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	71	55.714	ENSFHEG00000019728	-	96	60.976	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	83	52.821	ENSFHEG00000004601	-	65	52.821	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	79	53.171	ENSFHEG00000013384	-	51	57.216	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	78	50.510	ENSFHEG00000008014	-	72	50.510	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	84	47.287	ENSFHEG00000004728	-	75	54.730	Fundulus_heteroclitus
ENSDARG00000109749	si:ch211-162i8.7	77	55.276	ENSGAFG00000013969	-	96	55.172	Gambusia_affinis
ENSDARG00000109749	si:ch211-162i8.7	72	51.000	ENSGAFG00000013116	-	66	51.000	Gambusia_affinis
ENSDARG00000109749	si:ch211-162i8.7	71	50.794	ENSGAFG00000020505	-	81	47.170	Gambusia_affinis
ENSDARG00000109749	si:ch211-162i8.7	73	44.348	ENSGAFG00000013438	-	85	44.828	Gambusia_affinis
ENSDARG00000109749	si:ch211-162i8.7	77	50.777	ENSGAFG00000020501	-	52	50.777	Gambusia_affinis
ENSDARG00000109749	si:ch211-162i8.7	71	53.266	ENSHBUG00000022073	-	53	53.266	Haplochromis_burtoni
ENSDARG00000109749	si:ch211-162i8.7	72	47.727	ENSHBUG00000022063	-	73	47.727	Haplochromis_burtoni
ENSDARG00000109749	si:ch211-162i8.7	76	46.739	ENSHBUG00000002841	-	82	46.739	Haplochromis_burtoni
ENSDARG00000109749	si:ch211-162i8.7	71	54.271	ENSHBUG00000015226	-	51	54.271	Haplochromis_burtoni
ENSDARG00000109749	si:ch211-162i8.7	84	40.708	ENSKMAG00000000620	-	54	42.574	Kryptolebias_marmoratus
ENSDARG00000109749	si:ch211-162i8.7	72	54.592	ENSKMAG00000002583	-	95	55.224	Kryptolebias_marmoratus
ENSDARG00000109749	si:ch211-162i8.7	71	54.412	ENSKMAG00000017443	-	99	54.412	Kryptolebias_marmoratus
ENSDARG00000109749	si:ch211-162i8.7	86	47.791	ENSKMAG00000013290	-	94	47.791	Kryptolebias_marmoratus
ENSDARG00000109749	si:ch211-162i8.7	80	49.143	ENSKMAG00000018266	-	86	51.799	Kryptolebias_marmoratus
ENSDARG00000109749	si:ch211-162i8.7	72	55.556	ENSKMAG00000018656	si:dkey-77f5.14	99	55.556	Kryptolebias_marmoratus
ENSDARG00000109749	si:ch211-162i8.7	82	46.429	ENSLBEG00000012201	-	56	48.020	Labrus_bergylta
ENSDARG00000109749	si:ch211-162i8.7	78	48.052	ENSLBEG00000007937	-	63	48.052	Labrus_bergylta
ENSDARG00000109749	si:ch211-162i8.7	70	54.040	ENSLBEG00000004892	-	74	54.040	Labrus_bergylta
ENSDARG00000109749	si:ch211-162i8.7	76	50.575	ENSLBEG00000001756	-	79	48.066	Labrus_bergylta
ENSDARG00000109749	si:ch211-162i8.7	83	50.943	ENSLBEG00000000393	-	68	52.332	Labrus_bergylta
ENSDARG00000109749	si:ch211-162i8.7	71	54.774	ENSMAMG00000022154	-	51	54.774	Mastacembelus_armatus
ENSDARG00000109749	si:ch211-162i8.7	90	44.706	ENSMAMG00000022147	-	68	47.926	Mastacembelus_armatus
ENSDARG00000109749	si:ch211-162i8.7	77	45.545	ENSMZEG00005010493	-	96	43.564	Maylandia_zebra
ENSDARG00000109749	si:ch211-162i8.7	76	51.643	ENSMZEG00005012348	-	76	52.885	Maylandia_zebra
ENSDARG00000109749	si:ch211-162i8.7	71	55.102	ENSMZEG00005015126	-	81	55.102	Maylandia_zebra
ENSDARG00000109749	si:ch211-162i8.7	80	49.500	ENSMMOG00000005446	-	82	48.095	Mola_mola
ENSDARG00000109749	si:ch211-162i8.7	80	43.902	ENSMALG00000007422	-	56	43.902	Monopterus_albus
ENSDARG00000109749	si:ch211-162i8.7	72	50.000	ENSMALG00000010369	-	70	50.000	Monopterus_albus
ENSDARG00000109749	si:ch211-162i8.7	72	60.000	ENSMALG00000013592	-	69	54.545	Monopterus_albus
ENSDARG00000109749	si:ch211-162i8.7	92	35.907	ENSNBRG00000001761	-	56	41.791	Neolamprologus_brichardi
ENSDARG00000109749	si:ch211-162i8.7	71	54.271	ENSNBRG00000021375	-	51	54.271	Neolamprologus_brichardi
ENSDARG00000109749	si:ch211-162i8.7	74	52.459	ENSORLG00000029343	-	73	52.459	Oryzias_latipes
ENSDARG00000109749	si:ch211-162i8.7	86	46.250	ENSORLG00015016085	-	72	47.368	Oryzias_latipes_hsok
ENSDARG00000109749	si:ch211-162i8.7	83	45.455	ENSOMEG00000009071	-	89	50.000	Oryzias_melastigma
ENSDARG00000109749	si:ch211-162i8.7	87	48.899	ENSOMEG00000023820	-	89	54.301	Oryzias_melastigma
ENSDARG00000109749	si:ch211-162i8.7	77	42.202	ENSPMGG00000023410	-	63	40.351	Periophthalmus_magnuspinnatus
ENSDARG00000109749	si:ch211-162i8.7	72	55.941	ENSPFOG00000023156	-	79	55.941	Poecilia_formosa
ENSDARG00000109749	si:ch211-162i8.7	84	59.799	ENSPFOG00000007847	-	64	58.333	Poecilia_formosa
ENSDARG00000109749	si:ch211-162i8.7	71	61.494	ENSPFOG00000018245	-	100	61.494	Poecilia_formosa
ENSDARG00000109749	si:ch211-162i8.7	73	59.184	ENSPFOG00000015553	-	63	59.184	Poecilia_formosa
ENSDARG00000109749	si:ch211-162i8.7	72	54.610	ENSPLAG00000015517	-	55	54.610	Poecilia_latipinna
ENSDARG00000109749	si:ch211-162i8.7	78	59.167	ENSPLAG00000022731	-	85	59.167	Poecilia_latipinna
ENSDARG00000109749	si:ch211-162i8.7	72	53.548	ENSPLAG00000007596	-	62	54.305	Poecilia_latipinna
ENSDARG00000109749	si:ch211-162i8.7	71	49.383	ENSPMEG00000020827	-	98	49.383	Poecilia_mexicana
ENSDARG00000109749	si:ch211-162i8.7	78	55.455	ENSPMEG00000010334	-	50	55.455	Poecilia_mexicana
ENSDARG00000109749	si:ch211-162i8.7	78	58.333	ENSPMEG00000017986	-	100	58.333	Poecilia_mexicana
ENSDARG00000109749	si:ch211-162i8.7	73	51.852	ENSPMEG00000002104	-	55	51.852	Poecilia_mexicana
ENSDARG00000109749	si:ch211-162i8.7	88	52.632	ENSPMEG00000008960	-	71	52.247	Poecilia_mexicana
ENSDARG00000109749	si:ch211-162i8.7	71	54.783	ENSPMEG00000023840	-	100	54.783	Poecilia_mexicana
ENSDARG00000109749	si:ch211-162i8.7	62	54.730	ENSPMEG00000004605	-	64	54.730	Poecilia_mexicana
ENSDARG00000109749	si:ch211-162i8.7	76	56.436	ENSPMEG00000010533	-	78	56.436	Poecilia_mexicana
ENSDARG00000109749	si:ch211-162i8.7	73	51.351	ENSPREG00000019806	-	51	51.351	Poecilia_reticulata
ENSDARG00000109749	si:ch211-162i8.7	77	56.771	ENSPREG00000004728	-	71	56.771	Poecilia_reticulata
ENSDARG00000109749	si:ch211-162i8.7	71	47.917	ENSPNYG00000017980	-	73	47.917	Pundamilia_nyererei
ENSDARG00000109749	si:ch211-162i8.7	73	48.649	ENSPNYG00000019219	-	67	48.649	Pundamilia_nyererei
ENSDARG00000109749	si:ch211-162i8.7	71	49.246	ENSSDUG00000020788	-	60	49.246	Seriola_dumerili
ENSDARG00000109749	si:ch211-162i8.7	73	51.370	ENSSDUG00000006808	-	67	50.833	Seriola_dumerili
ENSDARG00000109749	si:ch211-162i8.7	83	50.000	ENSSDUG00000012926	-	82	50.000	Seriola_dumerili
ENSDARG00000109749	si:ch211-162i8.7	76	58.333	ENSSLDG00000000432	-	83	58.333	Seriola_lalandi_dorsalis
ENSDARG00000109749	si:ch211-162i8.7	71	50.000	ENSSLDG00000007524	-	58	49.677	Seriola_lalandi_dorsalis
ENSDARG00000109749	si:ch211-162i8.7	72	50.336	ENSSLDG00000005999	-	54	50.336	Seriola_lalandi_dorsalis
ENSDARG00000109749	si:ch211-162i8.7	84	52.381	ENSSLDG00000000352	-	68	52.381	Seriola_lalandi_dorsalis
ENSDARG00000109749	si:ch211-162i8.7	71	50.331	ENSSPAG00000005716	-	67	50.331	Stegastes_partitus
ENSDARG00000109749	si:ch211-162i8.7	71	48.966	ENSSPAG00000015809	-	58	48.966	Stegastes_partitus
ENSDARG00000109749	si:ch211-162i8.7	74	56.000	ENSXCOG00000008062	-	97	56.354	Xiphophorus_couchianus
ENSDARG00000109749	si:ch211-162i8.7	72	57.803	ENSXCOG00000010488	-	56	57.803	Xiphophorus_couchianus
ENSDARG00000109749	si:ch211-162i8.7	72	52.381	ENSXCOG00000007413	-	57	52.381	Xiphophorus_couchianus
ENSDARG00000109749	si:ch211-162i8.7	75	49.171	ENSXCOG00000010259	-	60	48.634	Xiphophorus_couchianus
ENSDARG00000109749	si:ch211-162i8.7	71	61.404	ENSXCOG00000007420	-	95	61.404	Xiphophorus_couchianus
ENSDARG00000109749	si:ch211-162i8.7	88	58.382	ENSXCOG00000000528	-	93	59.195	Xiphophorus_couchianus
ENSDARG00000109749	si:ch211-162i8.7	78	49.065	ENSXCOG00000014363	-	61	49.065	Xiphophorus_couchianus
ENSDARG00000109749	si:ch211-162i8.7	71	50.820	ENSXCOG00000015428	-	90	50.820	Xiphophorus_couchianus
ENSDARG00000109749	si:ch211-162i8.7	62	47.701	ENSXMAG00000027848	-	59	47.701	Xiphophorus_maculatus
ENSDARG00000109749	si:ch211-162i8.7	66	56.863	ENSXMAG00000021664	-	50	56.863	Xiphophorus_maculatus
ENSDARG00000109749	si:ch211-162i8.7	82	45.455	ENSXMAG00000023196	-	93	45.455	Xiphophorus_maculatus
ENSDARG00000109749	si:ch211-162i8.7	71	52.261	ENSXMAG00000023553	-	54	52.261	Xiphophorus_maculatus
ENSDARG00000109749	si:ch211-162i8.7	83	41.880	ENSXMAG00000028219	-	56	45.556	Xiphophorus_maculatus
ENSDARG00000109749	si:ch211-162i8.7	84	44.726	ENSXMAG00000025234	-	59	56.647	Xiphophorus_maculatus
ENSDARG00000109749	si:ch211-162i8.7	71	58.101	ENSXMAG00000028681	-	71	58.101	Xiphophorus_maculatus
ENSDARG00000109749	si:ch211-162i8.7	71	53.646	ENSXMAG00000023893	-	65	53.646	Xiphophorus_maculatus