EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000110229 (Gene tree)
Gene ID: -
Gene Symbol: zgc:173702
Alias: -
Full Name: zgc:173702
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 17055 bases
Position: chr4:46661522-46678576
Accession: ZDB-GENE-080208-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	1	9
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	2	9
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	3	9
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	4	9
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	5	9
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	6	9
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	7	9
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	8	9
ENSDARP00000130021	zf-C2H2	PF00096.26	3.4e-56	9	9
ENSDARP00000130021	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000172383	-	1152	-	ENSDARP00000130021	383 (aa)	-	A0A0R4I9J7

Gene Model

Click here to download ENSDARG00000110229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000110229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000110229	zgc:173702	99	62.467	ENSDARG00000098901	CABZ01002768.1	100	62.467
ENSDARG00000110229	zgc:173702	99	61.836	ENSDARG00000093994	znf1058	100	60.145
ENSDARG00000110229	zgc:173702	99	63.484	ENSDARG00000098071	znf1049	100	61.575
ENSDARG00000110229	zgc:173702	99	60.417	ENSDARG00000100509	si:dkey-82i20.2	99	60.417
ENSDARG00000110229	zgc:173702	100	65.000	ENSDARG00000101137	znf999	100	71.429
ENSDARG00000110229	zgc:173702	100	64.286	ENSDARG00000102600	CABZ01003344.1	100	62.381
ENSDARG00000110229	zgc:173702	100	65.238	ENSDARG00000104074	znf1052	100	57.619
ENSDARG00000110229	zgc:173702	92	61.173	ENSDARG00000103495	zgc:173714	99	66.102
ENSDARG00000110229	zgc:173702	99	69.689	ENSDARG00000109381	CU457778.2	99	69.948
ENSDARG00000110229	zgc:173702	100	64.341	ENSDARG00000110658	zgc:174696	100	68.146
ENSDARG00000110229	zgc:173702	99	51.282	ENSDARG00000092507	znf1013	98	52.308
ENSDARG00000110229	zgc:173702	99	57.576	ENSDARG00000103244	CABZ01081752.3	98	48.831
ENSDARG00000110229	zgc:173702	100	96.345	ENSDARG00000090160	zgc:173709	100	96.345
ENSDARG00000110229	zgc:173702	100	63.810	ENSDARG00000091994	znf1048	100	61.905
ENSDARG00000110229	zgc:173702	99	67.876	ENSDARG00000105137	zgc:173705	99	68.394
ENSDARG00000110229	zgc:173702	93	63.889	ENSDARG00000116920	BX465848.2	91	63.889
ENSDARG00000110229	zgc:173702	99	60.850	ENSDARG00000103310	znf1053	99	59.585
ENSDARG00000110229	zgc:173702	100	55.754	ENSDARG00000099736	CABZ01075078.1	100	63.939
ENSDARG00000110229	zgc:173702	99	53.500	ENSDARG00000103346	si:dkeyp-85d8.5	100	53.500
ENSDARG00000110229	zgc:173702	99	69.689	ENSDARG00000100001	znf1096	99	69.948
ENSDARG00000110229	zgc:173702	99	54.830	ENSDARG00000098604	si:dkey-14o6.4	100	54.830
ENSDARG00000110229	zgc:173702	99	53.414	ENSDARG00000087168	si:ch211-162i8.4	99	51.955
ENSDARG00000110229	zgc:173702	87	56.993	ENSDARG00000094484	si:ch211-162i8.4	97	61.333
ENSDARG00000110229	zgc:173702	99	53.693	ENSDARG00000109255	si:ch211-234c11.2	99	53.693
ENSDARG00000110229	zgc:173702	100	66.925	ENSDARG00000102791	zgc:174704	100	74.151
ENSDARG00000110229	zgc:173702	99	68.912	ENSDARG00000112725	si:dkey-22h13.2	99	69.171
ENSDARG00000110229	zgc:173702	100	58.403	ENSDARG00000105067	znf1043	100	68.810
ENSDARG00000110229	zgc:173702	99	62.385	ENSDARG00000091477	znf1066	100	63.517
ENSDARG00000110229	zgc:173702	100	95.822	ENSDARG00000102673	si:dkey-26i24.1	100	95.822
ENSDARG00000110229	zgc:173702	100	96.606	ENSDARG00000094558	si:dkeyp-53e4.1	100	96.606
ENSDARG00000110229	zgc:173702	100	61.667	ENSDARG00000086449	znf1055	100	59.762
ENSDARG00000110229	zgc:173702	99	62.769	ENSDARG00000103721	si:dkey-122c11.7	99	60.422
ENSDARG00000110229	zgc:173702	88	78.744	ENSDARG00000112606	BX248128.2	99	78.744
ENSDARG00000110229	zgc:173702	99	66.387	ENSDARG00000102008	si:dkey-72l17.6	99	62.005
ENSDARG00000110229	zgc:173702	99	62.462	ENSDARG00000102561	AL645691.1	98	61.376
ENSDARG00000110229	zgc:173702	100	66.837	ENSDARG00000104407	BX649453.1	100	66.837
ENSDARG00000110229	zgc:173702	99	51.807	ENSDARG00000074365	zgc:171901	100	58.442
ENSDARG00000110229	zgc:173702	92	67.227	ENSDARG00000116177	znf1127	92	67.227
ENSDARG00000110229	zgc:173702	99	49.561	ENSDARG00000096856	znf1012	100	49.010
ENSDARG00000110229	zgc:173702	99	61.238	ENSDARG00000111550	CABZ01002702.1	99	68.037
ENSDARG00000110229	zgc:173702	99	68.000	ENSDARG00000113808	si:dkeyp-82b4.6	96	61.741
ENSDARG00000110229	zgc:173702	99	45.588	ENSDARG00000074298	znf1015	100	49.194
ENSDARG00000110229	zgc:173702	99	53.457	ENSDARG00000093041	si:ch211-234c11.2	95	53.457
ENSDARG00000110229	zgc:173702	99	52.308	ENSDARG00000089715	si:cabz01054394.7	93	49.444
ENSDARG00000110229	zgc:173702	100	65.714	ENSDARG00000096210	znf1050	100	58.333
ENSDARG00000110229	zgc:173702	99	66.290	ENSDARG00000076272	znf1041	99	58.145
ENSDARG00000110229	zgc:173702	99	46.547	ENSDARG00000090942	CABZ01054394.1	99	46.547
ENSDARG00000110229	zgc:173702	99	55.000	ENSDARG00000102027	si:dkey-172k15.11	97	55.000
ENSDARG00000110229	zgc:173702	100	68.367	ENSDARG00000100961	zgc:174653	93	68.367
ENSDARG00000110229	zgc:173702	99	55.901	ENSDARG00000097812	si:ch73-144d13.5	100	55.901
ENSDARG00000110229	zgc:173702	99	55.432	ENSDARG00000110852	znf1111	99	55.432
ENSDARG00000110229	zgc:173702	100	64.286	ENSDARG00000098986	znf1040	100	61.905
ENSDARG00000110229	zgc:173702	99	60.119	ENSDARG00000098536	si:dkey-25i10.1	99	60.119
ENSDARG00000110229	zgc:173702	99	67.669	ENSDARG00000089814	znf1042	99	67.669
ENSDARG00000110229	zgc:173702	99	46.632	ENSDARG00000089598	si:cabz01054396.2	100	50.575
ENSDARG00000110229	zgc:173702	98	62.154	ENSDARG00000114793	CU182823.4	98	60.263
ENSDARG00000110229	zgc:173702	100	96.345	ENSDARG00000105306	si:dkeyp-44b5.5	100	96.345
ENSDARG00000110229	zgc:173702	100	64.048	ENSDARG00000116216	znf1046	100	62.381
ENSDARG00000110229	zgc:173702	87	59.712	ENSDARG00000100653	si:dkeyp-82b4.6	96	57.530
ENSDARG00000110229	zgc:173702	99	59.732	ENSDARG00000098270	znf1053	99	59.067
ENSDARG00000110229	zgc:173702	100	56.010	ENSDARG00000098430	znf1078	100	64.706
ENSDARG00000110229	zgc:173702	99	68.912	ENSDARG00000096189	si:dkey-54j5.2	99	69.171
ENSDARG00000110229	zgc:173702	100	56.010	ENSDARG00000101327	znf1076	100	64.450
ENSDARG00000110229	zgc:173702	99	60.088	ENSDARG00000094443	znf1036	100	60.088
ENSDARG00000110229	zgc:173702	99	60.000	ENSDARG00000113626	znf976	95	60.000
ENSDARG00000110229	zgc:173702	100	97.128	ENSDARG00000103471	si:dkey-199m13.4	100	97.128
ENSDARG00000110229	zgc:173702	100	62.537	ENSDARG00000088000	znf1057	100	62.113
ENSDARG00000110229	zgc:173702	99	57.436	ENSDARG00000114947	BX465848.1	99	65.385
ENSDARG00000110229	zgc:173702	100	66.667	ENSDARG00000098087	si:dkey-30f3.2	100	73.368
ENSDARG00000110229	zgc:173702	100	56.522	ENSDARG00000098196	znf1077	100	64.450
ENSDARG00000110229	zgc:173702	100	64.048	ENSDARG00000092938	znf1047	100	62.381
ENSDARG00000110229	zgc:173702	99	57.576	ENSDARG00000102800	CABZ01081752.2	99	48.312
ENSDARG00000110229	zgc:173702	99	54.183	ENSDARG00000098991	znf1095	98	54.062
ENSDARG00000110229	zgc:173702	100	57.033	ENSDARG00000115655	znf1078	100	64.962
ENSDARG00000110229	zgc:173702	99	64.767	ENSDARG00000114437	zgc:173705	99	69.110
ENSDARG00000110229	zgc:173702	100	96.606	ENSDARG00000096041	si:ch211-162i8.2	100	96.606
ENSDARG00000110229	zgc:173702	100	94.517	ENSDARG00000100842	si:ch211-223a21.4	100	94.517
ENSDARG00000110229	zgc:173702	99	60.784	ENSDARG00000114396	znf1017	100	51.681
ENSDARG00000110229	zgc:173702	99	68.653	ENSDARG00000115450	CABZ01012382.1	99	68.912
ENSDARG00000110229	zgc:173702	100	96.867	ENSDARG00000103636	zgc:173702	100	96.867
ENSDARG00000110229	zgc:173702	92	54.571	ENSDARG00000095605	CR846087.3	100	62.881
ENSDARG00000110229	zgc:173702	99	58.974	ENSDARG00000111465	znf1104	100	58.974
ENSDARG00000110229	zgc:173702	99	47.848	ENSDARG00000086223	si:ch73-144d13.4	100	47.848
ENSDARG00000110229	zgc:173702	99	62.462	ENSDARG00000112103	si:dkey-16p19.1	99	60.686

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000110229	zgc:173702	82	53.846	ENSCSEG00000011817	-	50	53.846	Cynoglossus_semilaevis
ENSDARG00000110229	zgc:173702	77	57.143	ENSGMOG00000020024	-	100	57.143	Gadus_morhua
ENSDARG00000110229	zgc:173702	81	52.564	ENSGAFG00000013839	-	63	52.564	Gambusia_affinis
ENSDARG00000110229	zgc:173702	79	42.714	ENSKMAG00000011441	-	68	42.714	Kryptolebias_marmoratus
ENSDARG00000110229	zgc:173702	99	43.439	ENSORLG00000012434	znf1064	82	39.269	Oryzias_latipes
ENSDARG00000110229	zgc:173702	77	46.078	ENSPFOG00000005998	-	57	51.250	Poecilia_formosa
ENSDARG00000110229	zgc:173702	77	50.602	ENSTRUG00000022969	-	65	50.602	Takifugu_rubripes
ENSDARG00000110229	zgc:173702	88	41.558	ENSXETG00000031310	-	68	45.399	Xenopus_tropicalis