EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000110658 (Gene tree)
Gene ID: 324116
Gene Symbol: zgc:174696
Alias: fc19a12|wu:fc19a12
Full Name: zgc:174696
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 9213 bases
Position: chr4:42065748-42074960
Accession: ZDB-GENE-030131-2836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135234	zf-C2H2	PF00096.26	4.2e-49	1	8
ENSDARP00000135234	zf-C2H2	PF00096.26	4.2e-49	2	8
ENSDARP00000135234	zf-C2H2	PF00096.26	4.2e-49	3	8
ENSDARP00000135234	zf-C2H2	PF00096.26	4.2e-49	4	8
ENSDARP00000135234	zf-C2H2	PF00096.26	4.2e-49	5	8
ENSDARP00000135234	zf-C2H2	PF00096.26	4.2e-49	6	8
ENSDARP00000135234	zf-C2H2	PF00096.26	4.2e-49	7	8
ENSDARP00000135234	zf-C2H2	PF00096.26	4.2e-49	8	8
ENSDARP00000135234	zf-met	PF12874.7	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000164406	-	1870	-	ENSDARP00000135234	329 (aa)	-	A0A0R4IM04

Gene Model

Click here to download ENSDARG00000110658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000110658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000110658	zgc:174696	99	70.112	ENSDARG00000109381	CU457778.2	99	70.112
ENSDARG00000110658	zgc:174696	100	72.157	ENSDARG00000116216	znf1046	100	72.157
ENSDARG00000110658	zgc:174696	99	80.303	ENSDARG00000102791	zgc:174704	99	80.303
ENSDARG00000110658	zgc:174696	100	67.102	ENSDARG00000103636	zgc:173702	100	64.083
ENSDARG00000110658	zgc:174696	100	65.565	ENSDARG00000115655	znf1078	100	62.534
ENSDARG00000110658	zgc:174696	99	80.909	ENSDARG00000098087	si:dkey-30f3.2	99	80.909
ENSDARG00000110658	zgc:174696	100	75.294	ENSDARG00000096210	znf1050	100	75.294
ENSDARG00000110658	zgc:174696	99	69.632	ENSDARG00000102561	AL645691.1	97	69.632
ENSDARG00000110658	zgc:174696	100	72.157	ENSDARG00000102600	CABZ01003344.1	100	72.157
ENSDARG00000110658	zgc:174696	99	53.793	ENSDARG00000114396	znf1017	89	53.571
ENSDARG00000110658	zgc:174696	100	66.841	ENSDARG00000090160	zgc:173709	100	61.499
ENSDARG00000110658	zgc:174696	99	65.084	ENSDARG00000114437	zgc:173705	99	65.084
ENSDARG00000110658	zgc:174696	100	72.549	ENSDARG00000088000	znf1057	100	72.549
ENSDARG00000110658	zgc:174696	91	65.465	ENSDARG00000095605	CR846087.3	100	61.562
ENSDARG00000110658	zgc:174696	99	72.332	ENSDARG00000098071	znf1049	100	72.332
ENSDARG00000110658	zgc:174696	100	65.840	ENSDARG00000101327	znf1076	100	62.259
ENSDARG00000110658	zgc:174696	100	68.217	ENSDARG00000105067	znf1043	100	68.217
ENSDARG00000110658	zgc:174696	99	65.698	ENSDARG00000098536	si:dkey-25i10.1	100	65.698
ENSDARG00000110658	zgc:174696	99	47.887	ENSDARG00000089598	si:cabz01054396.2	100	50.000
ENSDARG00000110658	zgc:174696	100	71.765	ENSDARG00000092938	znf1047	100	71.765
ENSDARG00000110658	zgc:174696	99	58.394	ENSDARG00000113626	znf976	95	58.394
ENSDARG00000110658	zgc:174696	99	69.553	ENSDARG00000096189	si:dkey-54j5.2	99	69.553
ENSDARG00000110658	zgc:174696	99	75.494	ENSDARG00000101137	znf999	99	75.494
ENSDARG00000110658	zgc:174696	100	48.688	ENSDARG00000096856	znf1012	95	48.688
ENSDARG00000110658	zgc:174696	100	70.980	ENSDARG00000089814	znf1042	100	70.980
ENSDARG00000110658	zgc:174696	100	73.725	ENSDARG00000104074	znf1052	100	73.725
ENSDARG00000110658	zgc:174696	99	47.147	ENSDARG00000075417	zgc:175107	100	47.147
ENSDARG00000110658	zgc:174696	99	68.293	ENSDARG00000114793	CU182823.4	98	68.293
ENSDARG00000110658	zgc:174696	100	71.765	ENSDARG00000091994	znf1048	100	71.765
ENSDARG00000110658	zgc:174696	99	44.809	ENSDARG00000086223	si:ch73-144d13.4	100	45.059
ENSDARG00000110658	zgc:174696	100	66.057	ENSDARG00000102673	si:dkey-26i24.1	100	72.549
ENSDARG00000110658	zgc:174696	100	65.098	ENSDARG00000086449	znf1055	100	66.275
ENSDARG00000110658	zgc:174696	99	69.113	ENSDARG00000103721	si:dkey-122c11.7	100	69.113
ENSDARG00000110658	zgc:174696	100	60.969	ENSDARG00000104407	BX649453.1	100	56.888
ENSDARG00000110658	zgc:174696	100	67.102	ENSDARG00000096041	si:ch211-162i8.2	100	63.049
ENSDARG00000110658	zgc:174696	86	65.614	ENSDARG00000100653	si:dkeyp-82b4.6	99	65.614
ENSDARG00000110658	zgc:174696	99	65.698	ENSDARG00000100509	si:dkey-82i20.2	100	65.698
ENSDARG00000110658	zgc:174696	100	66.942	ENSDARG00000114947	BX465848.1	100	63.361
ENSDARG00000110658	zgc:174696	100	68.146	ENSDARG00000110229	zgc:173702	100	64.341
ENSDARG00000110658	zgc:174696	100	65.565	ENSDARG00000099736	CABZ01075078.1	100	62.259
ENSDARG00000110658	zgc:174696	99	69.832	ENSDARG00000112725	si:dkey-22h13.2	99	69.832
ENSDARG00000110658	zgc:174696	100	67.624	ENSDARG00000105306	si:dkeyp-44b5.5	100	63.566
ENSDARG00000110658	zgc:174696	100	72.157	ENSDARG00000103310	znf1053	100	72.157
ENSDARG00000110658	zgc:174696	99	67.421	ENSDARG00000111550	CABZ01002702.1	99	67.421
ENSDARG00000110658	zgc:174696	99	50.769	ENSDARG00000096828	si:ch73-144d13.7	99	50.769
ENSDARG00000110658	zgc:174696	100	66.841	ENSDARG00000094558	si:dkeyp-53e4.1	100	63.566
ENSDARG00000110658	zgc:174696	99	56.464	ENSDARG00000098901	CABZ01002768.1	100	53.659
ENSDARG00000110658	zgc:174696	98	55.023	ENSDARG00000091477	znf1066	100	63.200
ENSDARG00000110658	zgc:174696	100	73.725	ENSDARG00000098270	znf1053	100	73.725
ENSDARG00000110658	zgc:174696	99	70.336	ENSDARG00000102008	si:dkey-72l17.6	100	70.336
ENSDARG00000110658	zgc:174696	78	98.558	ENSDARG00000112606	BX248128.2	100	98.558
ENSDARG00000110658	zgc:174696	99	69.274	ENSDARG00000105137	zgc:173705	99	69.274
ENSDARG00000110658	zgc:174696	99	70.281	ENSDARG00000093994	znf1058	100	70.281
ENSDARG00000110658	zgc:174696	100	67.363	ENSDARG00000103471	si:dkey-199m13.4	100	64.083
ENSDARG00000110658	zgc:174696	99	56.561	ENSDARG00000076272	znf1041	99	70.400
ENSDARG00000110658	zgc:174696	100	58.418	ENSDARG00000100961	zgc:174653	93	57.398
ENSDARG00000110658	zgc:174696	99	44.578	ENSDARG00000089715	si:cabz01054394.7	94	44.578
ENSDARG00000110658	zgc:174696	100	66.116	ENSDARG00000098430	znf1078	100	62.259
ENSDARG00000110658	zgc:174696	99	70.670	ENSDARG00000100001	znf1096	99	70.670
ENSDARG00000110658	zgc:174696	100	64.463	ENSDARG00000098196	znf1077	100	63.636
ENSDARG00000110658	zgc:174696	99	68.807	ENSDARG00000112103	si:dkey-16p19.1	100	68.807
ENSDARG00000110658	zgc:174696	99	69.832	ENSDARG00000115450	CABZ01012382.1	99	69.832
ENSDARG00000110658	zgc:174696	99	50.602	ENSDARG00000074365	zgc:171901	100	56.250
ENSDARG00000110658	zgc:174696	100	72.549	ENSDARG00000098986	znf1040	100	72.549
ENSDARG00000110658	zgc:174696	99	70.031	ENSDARG00000113808	si:dkeyp-82b4.6	96	70.031
ENSDARG00000110658	zgc:174696	91	62.727	ENSDARG00000103495	zgc:173714	99	62.727
ENSDARG00000110658	zgc:174696	91	56.825	ENSDARG00000116920	BX465848.2	91	60.067
ENSDARG00000110658	zgc:174696	91	57.703	ENSDARG00000116177	znf1127	77	61.017
ENSDARG00000110658	zgc:174696	100	66.841	ENSDARG00000100842	si:ch211-223a21.4	100	60.982
ENSDARG00000110658	zgc:174696	99	41.473	ENSDARG00000074298	znf1015	100	48.739

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000110658	zgc:174696	99	43.439	ENSORLG00000012434	znf1064	77	43.439	Oryzias_latipes
ENSDARG00000110658	zgc:174696	98	35.075	ENSORLG00015013828	-	67	35.075	Oryzias_latipes_hsok
ENSDARG00000110658	zgc:174696	75	44.144	ENSPFOG00000005998	-	55	42.446	Poecilia_formosa

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function