EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000110710 (Gene tree)
Gene ID: -
Gene Symbol: CU210890.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 6456 bases
Position: chr3:10743236-10749691
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	1	9
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	2	9
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	3	9
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	4	9
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	5	9
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	6	9
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	7	9
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	8	9
ENSDARP00000152036	zf-C2H2	PF00096.26	9.2e-49	9	9
ENSDARP00000152036	zf-met	PF12874.7	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000183088	CU210890.1-201	1077	-	ENSDARP00000152036	358 (aa)	-	A0A2R8QGA9

Gene Model

Click here to download ENSDARG00000110710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000110710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000110710	CU210890.1	97	57.718	ENSDARG00000103954	znf1152	93	57.718
ENSDARG00000110710	CU210890.1	97	61.682	ENSDARG00000101463	si:dkey-176f19.1	94	61.682
ENSDARG00000110710	CU210890.1	95	49.679	ENSDARG00000079760	zgc:112998	85	49.679
ENSDARG00000110710	CU210890.1	97	48.406	ENSDARG00000087290	si:ch211-202h22.10	95	48.406
ENSDARG00000110710	CU210890.1	96	49.842	ENSDARG00000094736	znf1157	87	49.842
ENSDARG00000110710	CU210890.1	96	61.165	ENSDARG00000094484	si:ch211-162i8.4	99	52.812
ENSDARG00000110710	CU210890.1	97	56.386	ENSDARG00000097521	si:dkey-111k8.5	88	56.386
ENSDARG00000110710	CU210890.1	93	55.906	ENSDARG00000115737	AL954741.2	99	50.534
ENSDARG00000110710	CU210890.1	97	65.447	ENSDARG00000113011	zgc:113102	93	65.447
ENSDARG00000110710	CU210890.1	96	45.139	ENSDARG00000026972	si:ch211-119o8.6	72	45.139
ENSDARG00000110710	CU210890.1	96	66.805	ENSDARG00000105056	znf45l	95	66.805
ENSDARG00000110710	CU210890.1	96	53.617	ENSDARG00000104065	znf1154	94	53.617
ENSDARG00000110710	CU210890.1	94	40.833	ENSDARG00000096575	si:dkey-182i3.9	99	40.833
ENSDARG00000110710	CU210890.1	96	55.769	ENSDARG00000096851	znf1143	100	55.769
ENSDARG00000110710	CU210890.1	96	65.823	ENSDARG00000103777	znf1001	99	65.823
ENSDARG00000110710	CU210890.1	96	65.027	ENSDARG00000109703	FO834825.1	85	65.027
ENSDARG00000110710	CU210890.1	94	56.081	ENSDARG00000102401	znf1001	93	56.081
ENSDARG00000110710	CU210890.1	97	54.180	ENSDARG00000088051	AL935044.1	100	54.180
ENSDARG00000110710	CU210890.1	99	60.816	ENSDARG00000099172	BX000701.1	86	57.303
ENSDARG00000110710	CU210890.1	97	54.819	ENSDARG00000109255	si:ch211-234c11.2	88	54.819
ENSDARG00000110710	CU210890.1	96	48.726	ENSDARG00000101562	znf1014	90	48.726
ENSDARG00000110710	CU210890.1	97	52.500	ENSDARG00000089940	znf1008	84	52.500
ENSDARG00000110710	CU210890.1	94	56.081	ENSDARG00000115857	znf1001	93	56.081
ENSDARG00000110710	CU210890.1	96	61.290	ENSDARG00000103530	zgc:113102	91	61.290
ENSDARG00000110710	CU210890.1	96	50.000	ENSDARG00000099917	znf1005	97	50.000
ENSDARG00000110710	CU210890.1	96	63.333	ENSDARG00000099890	CU207221.2	99	63.333
ENSDARG00000110710	CU210890.1	96	53.158	ENSDARG00000102411	CR847850.1	91	55.859
ENSDARG00000110710	CU210890.1	96	70.260	ENSDARG00000077712	zgc:113886	100	70.260
ENSDARG00000110710	CU210890.1	96	61.486	ENSDARG00000100803	zgc:173517	90	61.486
ENSDARG00000110710	CU210890.1	96	51.943	ENSDARG00000108441	CU570894.1	96	48.896
ENSDARG00000110710	CU210890.1	96	53.041	ENSDARG00000101694	znf1184	82	53.041
ENSDARG00000110710	CU210890.1	94	53.722	ENSDARG00000105074	BX000701.2	98	55.288
ENSDARG00000110710	CU210890.1	94	63.978	ENSDARG00000098923	zgc:173577	91	63.978
ENSDARG00000110710	CU210890.1	96	52.191	ENSDARG00000053165	zgc:113377	90	52.191
ENSDARG00000110710	CU210890.1	97	56.329	ENSDARG00000098021	si:dkey-111k8.2	87	56.329
ENSDARG00000110710	CU210890.1	97	50.644	ENSDARG00000099986	si:ch211-207i20.2	64	50.644
ENSDARG00000110710	CU210890.1	96	54.237	ENSDARG00000088507	znf982	78	54.237
ENSDARG00000110710	CU210890.1	96	60.811	ENSDARG00000098248	CABZ01081730.1	100	60.811
ENSDARG00000110710	CU210890.1	96	57.087	ENSDARG00000113626	znf976	99	56.140
ENSDARG00000110710	CU210890.1	96	62.090	ENSDARG00000091679	FO704858.1	93	62.090
ENSDARG00000110710	CU210890.1	95	49.679	ENSDARG00000102282	CABZ01063298.1	88	49.679
ENSDARG00000110710	CU210890.1	97	62.963	ENSDARG00000099731	CABZ01066719.1	95	62.963
ENSDARG00000110710	CU210890.1	95	53.532	ENSDARG00000102678	znf1181	75	53.532
ENSDARG00000110710	CU210890.1	97	43.574	ENSDARG00000075834	si:dkey-182i3.8	93	45.833
ENSDARG00000110710	CU210890.1	97	52.303	ENSDARG00000093378	si:ch211-235i11.5	84	66.346
ENSDARG00000110710	CU210890.1	95	48.511	ENSDARG00000104798	BX510922.2	86	48.511
ENSDARG00000110710	CU210890.1	94	50.838	ENSDARG00000105295	LO017784.1	64	50.838
ENSDARG00000110710	CU210890.1	97	46.224	ENSDARG00000090942	CABZ01054394.1	91	46.224
ENSDARG00000110710	CU210890.1	99	54.895	ENSDARG00000111465	znf1104	90	56.598
ENSDARG00000110710	CU210890.1	97	47.003	ENSDARG00000101093	zgc:162971	86	47.003
ENSDARG00000110710	CU210890.1	97	51.351	ENSDARG00000097928	si:ch73-40a17.4	84	51.351
ENSDARG00000110710	CU210890.1	96	49.854	ENSDARG00000098898	si:ch211-255f4.2	99	49.854
ENSDARG00000110710	CU210890.1	97	45.506	ENSDARG00000058562	znf991	92	45.506
ENSDARG00000110710	CU210890.1	96	52.041	ENSDARG00000078159	zgc:175284	89	52.041
ENSDARG00000110710	CU210890.1	97	48.227	ENSDARG00000071714	znf983	92	48.404
ENSDARG00000110710	CU210890.1	97	52.303	ENSDARG00000100587	zgc:113886	81	66.346
ENSDARG00000110710	CU210890.1	96	49.640	ENSDARG00000074298	znf1015	81	48.400
ENSDARG00000110710	CU210890.1	96	43.598	ENSDARG00000102959	zgc:171220	92	43.598
ENSDARG00000110710	CU210890.1	97	48.171	ENSDARG00000087839	si:dkey-33c14.6	87	48.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000110710	CU210890.1	94	53.503	ENSATEG00000003344	-	71	53.503	Anabas_testudineus
ENSDARG00000110710	CU210890.1	94	49.682	ENSACLG00000011642	-	83	49.682	Astatotilapia_calliptera
ENSDARG00000110710	CU210890.1	96	48.918	ENSACLG00000019270	-	77	48.918	Astatotilapia_calliptera
ENSDARG00000110710	CU210890.1	96	49.813	ENSCING00000003072	-	96	48.276	Ciona_intestinalis
ENSDARG00000110710	CU210890.1	93	47.651	ENSCING00000020618	-	91	47.651	Ciona_intestinalis
ENSDARG00000110710	CU210890.1	96	44.702	ENSCING00000000609	-	99	45.016	Ciona_intestinalis
ENSDARG00000110710	CU210890.1	95	52.145	ENSDNOG00000045100	-	96	52.145	Dasypus_novemcinctus
ENSDARG00000110710	CU210890.1	94	45.957	ENSEBUG00000013392	-	57	45.957	Eptatretus_burgeri
ENSDARG00000110710	CU210890.1	97	44.170	ENSEBUG00000015155	-	72	44.170	Eptatretus_burgeri
ENSDARG00000110710	CU210890.1	93	58.291	ENSEBUG00000015661	-	71	58.291	Eptatretus_burgeri
ENSDARG00000110710	CU210890.1	96	60.500	ENSIPUG00000007934	-	97	60.500	Ictalurus_punctatus
ENSDARG00000110710	CU210890.1	96	57.143	ENSIPUG00000005581	-	71	57.143	Ictalurus_punctatus
ENSDARG00000110710	CU210890.1	96	52.647	MGP_CAROLIEiJ_G0015655	-	80	52.647	Mus_caroli