EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000111106 (Gene tree)
Gene ID: 393666
Gene Symbol: arl3l1
Alias: zgc:73049
Full Name: ADP-ribosylation factor-like 3%2C like 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 15388 bases
Position: chr21:33172526-33187913
Accession: ZDB-GENE-040426-1649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000149094	MMR_HSR1	PF01926.23	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000183532	-	3527	-	ENSDARP00000149094	187 (aa)	-	Q6PC92

Gene Model

Click here to download ENSDARG00000111106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000111106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000111106	arl3l1	96	44.199	ENSDARG00000101680	arl1	99	46.512
ENSDARG00000111106	arl3l1	85	34.375	ENSDARG00000070318	arl8bb	86	34.375
ENSDARG00000111106	arl3l1	85	32.500	ENSDARG00000078686	arl8a	86	32.500
ENSDARG00000111106	arl3l1	99	45.699	ENSDARG00000014763	arf2a	100	45.699
ENSDARG00000111106	arl3l1	89	43.373	ENSDARG00000070472	arf5	92	43.373
ENSDARG00000111106	arl3l1	85	42.073	ENSDARG00000063223	arl14	82	42.073
ENSDARG00000111106	arl3l1	85	32.500	ENSDARG00000006915	arl8ba	86	32.500
ENSDARG00000111106	arl3l1	94	43.182	ENSDARG00000045989	arf4a	97	43.182
ENSDARG00000111106	arl3l1	93	30.108	ENSDARG00000103403	sar1b	94	30.108
ENSDARG00000111106	arl3l1	99	42.703	ENSDARG00000113899	zgc:77650	100	42.703
ENSDARG00000111106	arl3l1	87	40.491	ENSDARG00000018627	arl5a	91	40.491
ENSDARG00000111106	arl3l1	89	47.305	ENSDARG00000070539	arf3a	92	47.305
ENSDARG00000111106	arl3l1	89	37.572	ENSDARG00000045074	arl4d	87	37.572
ENSDARG00000111106	arl3l1	89	46.707	ENSDARG00000036998	arf3b	92	46.707
ENSDARG00000111106	arl3l1	87	33.140	ENSDARG00000012763	arl13b	66	33.333
ENSDARG00000111106	arl3l1	99	45.699	ENSDARG00000016393	arf2b	100	45.699
ENSDARG00000111106	arl3l1	89	43.182	ENSDARG00000033182	arl4ab	87	43.182
ENSDARG00000111106	arl3l1	99	37.838	ENSDARG00000074210	ARF5	89	37.838
ENSDARG00000111106	arl3l1	50	30.612	ENSDARG00000037967	si:dkey-16l2.16	82	30.612
ENSDARG00000111106	arl3l1	93	32.258	ENSDARG00000033320	sar1ab	94	32.258
ENSDARG00000111106	arl3l1	96	47.486	ENSDARG00000069496	arl2	97	47.486
ENSDARG00000111106	arl3l1	86	39.375	ENSDARG00000094709	arl8	89	39.375
ENSDARG00000111106	arl3l1	89	43.678	ENSDARG00000057606	arl4ca	90	43.678
ENSDARG00000111106	arl3l1	97	75.138	ENSDARG00000071409	arl3	99	75.138
ENSDARG00000111106	arl3l1	94	36.932	ENSDARG00000035719	arl5c	97	36.932
ENSDARG00000111106	arl3l1	81	43.137	ENSDARG00000036637	arl11	87	43.137
ENSDARG00000111106	arl3l1	97	75.138	ENSDARG00000056794	zgc:110197	99	75.138
ENSDARG00000111106	arl3l1	89	42.529	ENSDARG00000032708	arl4cb	90	42.529
ENSDARG00000111106	arl3l1	100	86.631	ENSDARG00000015404	arl3l2	100	86.631
ENSDARG00000111106	arl3l1	61	31.148	ENSDARG00000037884	rab30	59	31.148
ENSDARG00000111106	arl3l1	99	45.161	ENSDARG00000009484	arf1	100	45.161
ENSDARG00000111106	arl3l1	88	40.698	ENSDARG00000099918	arl4aa	86	40.698
ENSDARG00000111106	arl3l1	87	36.628	ENSDARG00000057857	arfrp1	86	36.628
ENSDARG00000111106	arl3l1	94	36.667	ENSDARG00000032056	arl6	97	36.667
ENSDARG00000111106	arl3l1	99	45.699	ENSDARG00000056582	arf2b	100	45.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000111106	arl3l1	100	95.187	ENSAPOG00000010213	arl3l2	100	95.187	Acanthochromis_polyacanthus
ENSDARG00000111106	arl3l1	97	95.580	ENSACIG00000016407	arl3l2	97	95.580	Amphilophus_citrinellus
ENSDARG00000111106	arl3l1	97	94.505	ENSAOCG00000007094	arl3l2	99	94.505	Amphiprion_ocellaris
ENSDARG00000111106	arl3l1	100	94.652	ENSAPEG00000016770	arl3l2	100	94.652	Amphiprion_percula
ENSDARG00000111106	arl3l1	100	94.118	ENSATEG00000008185	arl3l2	100	94.118	Anabas_testudineus
ENSDARG00000111106	arl3l1	97	80.220	ENSACAG00000006487	-	100	80.220	Anolis_carolinensis
ENSDARG00000111106	arl3l1	100	94.118	ENSACLG00000008835	arl3l2	100	94.118	Astatotilapia_calliptera
ENSDARG00000111106	arl3l1	100	89.840	ENSAMXG00000018516	arl3l2	100	89.840	Astyanax_mexicanus
ENSDARG00000111106	arl3l1	100	98.930	ENSAMXG00000019160	arl3l1	100	98.930	Astyanax_mexicanus
ENSDARG00000111106	arl3l1	97	81.868	ENSCPBG00000022120	-	100	81.868	Chrysemys_picta_bellii
ENSDARG00000111106	arl3l1	100	91.444	ENSCSEG00000010824	arl3l2	100	91.444	Cynoglossus_semilaevis
ENSDARG00000111106	arl3l1	100	94.118	ENSCVAG00000010611	arl3l2	100	94.118	Cyprinodon_variegatus
ENSDARG00000111106	arl3l1	100	91.979	ENSELUG00000003904	arl3l1	99	91.979	Esox_lucius
ENSDARG00000111106	arl3l1	99	90.909	ENSELUG00000016208	arl3l2	99	90.909	Esox_lucius
ENSDARG00000111106	arl3l1	97	81.319	ENSFALG00000008757	-	97	81.319	Ficedula_albicollis
ENSDARG00000111106	arl3l1	97	84.066	ENSFHEG00000000334	arl3l2	98	84.066	Fundulus_heteroclitus
ENSDARG00000111106	arl3l1	92	91.860	ENSGMOG00000006309	arl3l2	100	91.860	Gadus_morhua
ENSDARG00000111106	arl3l1	91	70.175	ENSGALG00000003134	-	99	70.175	Gallus_gallus
ENSDARG00000111106	arl3l1	89	95.181	ENSGAFG00000008601	arl3l2	78	95.181	Gambusia_affinis
ENSDARG00000111106	arl3l1	100	91.979	ENSGACG00000018033	arl3l2	100	91.979	Gasterosteus_aculeatus
ENSDARG00000111106	arl3l1	100	93.583	ENSHBUG00000002903	arl3l2	100	93.583	Haplochromis_burtoni
ENSDARG00000111106	arl3l1	100	92.513	ENSHCOG00000016255	arl3l2	100	92.513	Hippocampus_comes
ENSDARG00000111106	arl3l1	100	94.652	ENSIPUG00000019792	arl3l1	100	94.652	Ictalurus_punctatus
ENSDARG00000111106	arl3l1	100	92.513	ENSKMAG00000004435	arl3l2	100	92.513	Kryptolebias_marmoratus
ENSDARG00000111106	arl3l1	100	94.118	ENSLBEG00000027806	arl3l2	100	94.118	Labrus_bergylta
ENSDARG00000111106	arl3l1	97	79.121	ENSLACG00000016598	arl3l1	91	79.121	Latimeria_chalumnae
ENSDARG00000111106	arl3l1	100	92.513	ENSLOCG00000010965	arl3l2	100	92.513	Lepisosteus_oculatus
ENSDARG00000111106	arl3l1	100	91.444	ENSMAMG00000007434	arl3l2	93	91.444	Mastacembelus_armatus
ENSDARG00000111106	arl3l1	100	94.118	ENSMZEG00005012971	arl3l2	100	94.118	Maylandia_zebra
ENSDARG00000111106	arl3l1	97	77.901	ENSMGAG00000004170	-	100	77.901	Meleagris_gallopavo
ENSDARG00000111106	arl3l1	100	94.652	ENSMMOG00000003211	arl3l2	100	94.652	Mola_mola
ENSDARG00000111106	arl3l1	100	93.048	ENSMALG00000014013	arl3l2	100	93.048	Monopterus_albus
ENSDARG00000111106	arl3l1	100	94.118	ENSNBRG00000010560	arl3l2	100	94.118	Neolamprologus_brichardi
ENSDARG00000111106	arl3l1	100	94.652	ENSONIG00000013045	arl3l2	100	94.652	Oreochromis_niloticus
ENSDARG00000111106	arl3l1	100	93.583	ENSORLG00000005005	arl3l2	100	93.583	Oryzias_latipes
ENSDARG00000111106	arl3l1	100	93.048	ENSORLG00020012894	arl3l2	100	93.048	Oryzias_latipes_hni
ENSDARG00000111106	arl3l1	100	93.583	ENSORLG00015022526	arl3l2	100	93.583	Oryzias_latipes_hsok
ENSDARG00000111106	arl3l1	100	94.118	ENSOMEG00000005057	arl3l2	100	94.118	Oryzias_melastigma
ENSDARG00000111106	arl3l1	97	87.293	ENSPKIG00000019284	arl3l1	98	87.293	Paramormyrops_kingsleyae
ENSDARG00000111106	arl3l1	100	93.048	ENSPMGG00000017655	arl3l2	99	93.048	Periophthalmus_magnuspinnatus
ENSDARG00000111106	arl3l1	100	94.118	ENSPFOG00000005789	arl3l2	100	94.118	Poecilia_formosa
ENSDARG00000111106	arl3l1	100	94.118	ENSPLAG00000008384	arl3l2	100	94.118	Poecilia_latipinna
ENSDARG00000111106	arl3l1	97	93.370	ENSPMEG00000007916	arl3l2	99	93.370	Poecilia_mexicana
ENSDARG00000111106	arl3l1	100	94.652	ENSPREG00000003600	arl3l2	100	94.652	Poecilia_reticulata
ENSDARG00000111106	arl3l1	100	94.118	ENSPNYG00000000364	arl3l2	100	94.118	Pundamilia_nyererei
ENSDARG00000111106	arl3l1	100	98.930	ENSPNAG00000013238	arl3l1	100	98.930	Pygocentrus_nattereri
ENSDARG00000111106	arl3l1	100	90.909	ENSPNAG00000010083	arl3l2	100	90.909	Pygocentrus_nattereri
ENSDARG00000111106	arl3l1	100	95.722	ENSSFOG00015022345	-	100	95.722	Scleropages_formosus
ENSDARG00000111106	arl3l1	100	93.048	ENSSFOG00015014993	-	100	93.048	Scleropages_formosus
ENSDARG00000111106	arl3l1	100	93.048	ENSSMAG00000003002	arl3l2	94	93.048	Scophthalmus_maximus
ENSDARG00000111106	arl3l1	100	94.652	ENSSDUG00000003943	arl3l2	100	94.652	Seriola_dumerili
ENSDARG00000111106	arl3l1	100	91.237	ENSSLDG00000003967	arl3l2	100	91.237	Seriola_lalandi_dorsalis
ENSDARG00000111106	arl3l1	100	83.422	ENSSPUG00000005249	-	100	83.422	Sphenodon_punctatus
ENSDARG00000111106	arl3l1	97	94.505	ENSSPAG00000000321	arl3l2	97	94.505	Stegastes_partitus
ENSDARG00000111106	arl3l1	97	80.328	ENSTGUG00000000378	-	100	80.328	Taeniopygia_guttata
ENSDARG00000111106	arl3l1	100	93.048	ENSTRUG00000004035	arl3l2	100	93.048	Takifugu_rubripes
ENSDARG00000111106	arl3l1	100	93.583	ENSTNIG00000014233	arl3l2	100	93.583	Tetraodon_nigroviridis
ENSDARG00000111106	arl3l1	100	72.632	ENSXETG00000022343	arl3l2	100	72.632	Xenopus_tropicalis
ENSDARG00000111106	arl3l1	100	93.583	ENSXCOG00000003337	arl3l2	100	93.583	Xiphophorus_couchianus
ENSDARG00000111106	arl3l1	100	93.583	ENSXMAG00000008700	arl3l2	100	93.583	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0015630	microtubule cytoskeleton	21873635.	IBA	Component
GO:0048841	regulation of axon extension involved in axon guidance	23749482.	IMP	Process
GO:0060271	cilium assembly	21873635.	IBA	Process