EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000111550 (Gene tree)
Gene ID: -
Gene Symbol: CABZ01002702.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7530 bases
Position: chr4:68678959-68686488
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000133168	zf-C2H2	PF00096.26	1.1e-44	1	7
ENSDARP00000133168	zf-C2H2	PF00096.26	1.1e-44	2	7
ENSDARP00000133168	zf-C2H2	PF00096.26	1.1e-44	3	7
ENSDARP00000133168	zf-C2H2	PF00096.26	1.1e-44	4	7
ENSDARP00000133168	zf-C2H2	PF00096.26	1.1e-44	5	7
ENSDARP00000133168	zf-C2H2	PF00096.26	1.1e-44	6	7
ENSDARP00000133168	zf-C2H2	PF00096.26	1.1e-44	7	7
ENSDARP00000131281	zf-C2H2	PF00096.26	2.2e-30	1	4
ENSDARP00000131281	zf-C2H2	PF00096.26	2.2e-30	2	4
ENSDARP00000131281	zf-C2H2	PF00096.26	2.2e-30	3	4
ENSDARP00000131281	zf-C2H2	PF00096.26	2.2e-30	4	4
ENSDARP00000133168	zf-met	PF12874.7	0.0007	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000160969	CABZ01002702.1-202	954	-	ENSDARP00000133168	317 (aa)	-	A0A0G2KLE1
ENSDART00000158527	CABZ01002702.1-201	660	-	ENSDARP00000131281	219 (aa)	-	F1QYU6

Gene Model

Click here to download ENSDARG00000111550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000111550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000111550	CABZ01002702.1	99	66.667	ENSDARG00000102673	si:dkey-26i24.1	99	60.261
ENSDARG00000111550	CABZ01002702.1	99	67.586	ENSDARG00000089814	znf1042	99	66.135
ENSDARG00000111550	CABZ01002702.1	99	70.683	ENSDARG00000096189	si:dkey-54j5.2	99	68.675
ENSDARG00000111550	CABZ01002702.1	99	68.037	ENSDARG00000090160	zgc:173709	99	51.958
ENSDARG00000111550	CABZ01002702.1	99	67.411	ENSDARG00000116216	znf1046	99	63.745
ENSDARG00000111550	CABZ01002702.1	79	92.486	ENSDARG00000100653	si:dkeyp-82b4.6	98	92.486
ENSDARG00000111550	CABZ01002702.1	99	66.667	ENSDARG00000103636	zgc:173702	99	57.846
ENSDARG00000111550	CABZ01002702.1	99	66.964	ENSDARG00000091994	znf1048	99	63.745
ENSDARG00000111550	CABZ01002702.1	99	67.411	ENSDARG00000092938	znf1047	99	63.347
ENSDARG00000111550	CABZ01002702.1	99	70.281	ENSDARG00000115450	CABZ01012382.1	99	68.273
ENSDARG00000111550	CABZ01002702.1	99	91.705	ENSDARG00000112103	si:dkey-16p19.1	99	91.705
ENSDARG00000111550	CABZ01002702.1	98	52.830	ENSDARG00000105692	CABZ01069022.1	99	52.830
ENSDARG00000111550	CABZ01002702.1	99	64.732	ENSDARG00000098536	si:dkey-25i10.1	100	65.116
ENSDARG00000111550	CABZ01002702.1	99	61.991	ENSDARG00000098901	CABZ01002768.1	100	55.077
ENSDARG00000111550	CABZ01002702.1	99	90.783	ENSDARG00000103721	si:dkey-122c11.7	99	90.783
ENSDARG00000111550	CABZ01002702.1	99	63.855	ENSDARG00000114437	zgc:173705	99	63.855
ENSDARG00000111550	CABZ01002702.1	99	66.667	ENSDARG00000094558	si:dkeyp-53e4.1	99	57.576
ENSDARG00000111550	CABZ01002702.1	99	66.667	ENSDARG00000100842	si:ch211-223a21.4	99	54.237
ENSDARG00000111550	CABZ01002702.1	87	62.080	ENSDARG00000103495	zgc:173714	99	62.080
ENSDARG00000111550	CABZ01002702.1	99	68.037	ENSDARG00000110229	zgc:173702	99	61.238
ENSDARG00000111550	CABZ01002702.1	99	66.071	ENSDARG00000101137	znf999	97	72.549
ENSDARG00000111550	CABZ01002702.1	99	69.478	ENSDARG00000109381	CU457778.2	99	67.470
ENSDARG00000111550	CABZ01002702.1	98	67.500	ENSDARG00000102837	znf1145	100	67.500
ENSDARG00000111550	CABZ01002702.1	99	60.000	ENSDARG00000091477	znf1066	100	58.400
ENSDARG00000111550	CABZ01002702.1	86	58.537	ENSDARG00000095605	CR846087.3	99	58.232
ENSDARG00000111550	CABZ01002702.1	98	49.091	ENSDARG00000101365	si:cabz01021430.2	100	51.724
ENSDARG00000111550	CABZ01002702.1	99	60.690	ENSDARG00000093994	znf1058	100	62.393
ENSDARG00000111550	CABZ01002702.1	99	69.231	ENSDARG00000102791	zgc:174704	99	69.231
ENSDARG00000111550	CABZ01002702.1	99	95.392	ENSDARG00000113808	si:dkeyp-82b4.6	96	95.392
ENSDARG00000111550	CABZ01002702.1	87	73.196	ENSDARG00000116920	BX465848.2	91	73.196
ENSDARG00000111550	CABZ01002702.1	99	67.411	ENSDARG00000104074	znf1052	99	63.347
ENSDARG00000111550	CABZ01002702.1	99	65.035	ENSDARG00000088000	znf1057	99	62.393
ENSDARG00000111550	CABZ01002702.1	99	92.166	ENSDARG00000102008	si:dkey-72l17.6	99	92.166
ENSDARG00000111550	CABZ01002702.1	99	67.580	ENSDARG00000105306	si:dkeyp-44b5.5	99	60.912
ENSDARG00000111550	CABZ01002702.1	99	70.281	ENSDARG00000112725	si:dkey-22h13.2	99	67.470
ENSDARG00000111550	CABZ01002702.1	99	68.037	ENSDARG00000096041	si:ch211-162i8.2	99	55.085
ENSDARG00000111550	CABZ01002702.1	99	49.655	ENSDARG00000074365	zgc:171901	100	68.750
ENSDARG00000111550	CABZ01002702.1	99	68.276	ENSDARG00000076272	znf1041	99	67.331
ENSDARG00000111550	CABZ01002702.1	72	64.216	ENSDARG00000112606	BX248128.2	99	64.216
ENSDARG00000111550	CABZ01002702.1	99	91.244	ENSDARG00000102561	AL645691.1	97	91.244
ENSDARG00000111550	CABZ01002702.1	99	63.241	ENSDARG00000114947	BX465848.1	99	63.241
ENSDARG00000111550	CABZ01002702.1	85	73.822	ENSDARG00000116177	znf1127	92	62.034
ENSDARG00000111550	CABZ01002702.1	99	60.474	ENSDARG00000115655	znf1078	99	59.777
ENSDARG00000111550	CABZ01002702.1	99	69.478	ENSDARG00000105137	zgc:173705	99	67.470
ENSDARG00000111550	CABZ01002702.1	99	62.451	ENSDARG00000099736	CABZ01075078.1	99	60.615
ENSDARG00000111550	CABZ01002702.1	99	67.421	ENSDARG00000110658	zgc:174696	99	67.421
ENSDARG00000111550	CABZ01002702.1	99	68.304	ENSDARG00000104407	BX649453.1	99	53.351
ENSDARG00000111550	CABZ01002702.1	99	69.880	ENSDARG00000100001	znf1096	99	67.871
ENSDARG00000111550	CABZ01002702.1	99	62.451	ENSDARG00000098430	znf1078	99	60.894
ENSDARG00000111550	CABZ01002702.1	99	60.474	ENSDARG00000101327	znf1076	99	59.777
ENSDARG00000111550	CABZ01002702.1	99	69.231	ENSDARG00000098087	si:dkey-30f3.2	99	69.231
ENSDARG00000111550	CABZ01002702.1	99	65.044	ENSDARG00000105067	znf1043	99	62.151
ENSDARG00000111550	CABZ01002702.1	99	62.451	ENSDARG00000098196	znf1077	99	61.732
ENSDARG00000111550	CABZ01002702.1	99	67.586	ENSDARG00000098071	znf1049	99	64.800
ENSDARG00000111550	CABZ01002702.1	99	68.304	ENSDARG00000096210	znf1050	99	64.143
ENSDARG00000111550	CABZ01002702.1	99	68.037	ENSDARG00000103471	si:dkey-199m13.4	99	60.000
ENSDARG00000111550	CABZ01002702.1	97	64.535	ENSDARG00000100509	si:dkey-82i20.2	100	64.535
ENSDARG00000111550	CABZ01002702.1	99	66.518	ENSDARG00000102600	CABZ01003344.1	99	64.143
ENSDARG00000111550	CABZ01002702.1	99	66.518	ENSDARG00000098986	znf1040	99	64.143
ENSDARG00000111550	CABZ01002702.1	99	90.783	ENSDARG00000114793	CU182823.4	98	90.783
ENSDARG00000111550	CABZ01002702.1	99	74.336	ENSDARG00000100961	zgc:174653	92	74.336

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000111550	CABZ01002702.1	64	39.098	ENSCSEG00000011817	-	65	34.146	Cynoglossus_semilaevis
ENSDARG00000111550	CABZ01002702.1	72	52.747	ENSGMOG00000020024	-	100	52.747	Gadus_morhua
ENSDARG00000111550	CABZ01002702.1	65	39.655	ENSNBRG00000019881	-	56	32.258	Neolamprologus_brichardi
ENSDARG00000111550	CABZ01002702.1	72	41.667	ENSSDUG00000015456	-	50	34.194	Seriola_dumerili
ENSDARG00000111550	CABZ01002702.1	80	37.838	ENSSPAG00000017203	-	67	34.911	Stegastes_partitus