EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000111614 (Gene tree)
Gene ID: -
Gene Symbol: znf1183
Alias: si:dkey-15h8.5
Full Name: zinc finger protein 1183
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 80273 bases
Position: chr22:1526040-1606312
Accession: ZDB-GENE-050208-464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000132329	zf-C2H2	PF00096.26	4.7e-40	1	7
ENSDARP00000132329	zf-C2H2	PF00096.26	4.7e-40	2	7
ENSDARP00000132329	zf-C2H2	PF00096.26	4.7e-40	3	7
ENSDARP00000132329	zf-C2H2	PF00096.26	4.7e-40	4	7
ENSDARP00000132329	zf-C2H2	PF00096.26	4.7e-40	5	7
ENSDARP00000132329	zf-C2H2	PF00096.26	4.7e-40	6	7
ENSDARP00000132329	zf-C2H2	PF00096.26	4.7e-40	7	7
ENSDARP00000132329	zf-met	PF12874.7	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000159126	-	888	-	ENSDARP00000132329	295 (aa)	-	A0A0R4IC40
ENSDART00000164089	-	243	-	ENSDARP00000138312	36 (aa)	-	A0A0R4IQA9

Gene Model

Click here to download ENSDARG00000111614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000111614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000111614	znf1183	100	46.721	ENSDARG00000071790	znf1153	99	46.721
ENSDARG00000111614	znf1183	100	48.980	ENSDARG00000112141	znf1169	94	50.831
ENSDARG00000111614	znf1183	84	58.264	ENSDARG00000098898	si:ch211-255f4.2	99	58.264
ENSDARG00000111614	znf1183	87	43.713	ENSDARG00000071833	znf1162	100	47.205
ENSDARG00000111614	znf1183	92	58.824	ENSDARG00000088507	znf982	99	52.778
ENSDARG00000111614	znf1183	83	56.886	ENSDARG00000078814	si:dkey-34m19.3	76	56.886
ENSDARG00000111614	znf1183	81	55.172	ENSDARG00000069869	zgc:113030	97	55.172
ENSDARG00000111614	znf1183	89	52.652	ENSDARG00000102401	znf1001	96	54.167
ENSDARG00000111614	znf1183	96	49.027	ENSDARG00000071714	znf983	98	47.458
ENSDARG00000111614	znf1183	84	54.054	ENSDARG00000115737	AL954741.2	99	54.054
ENSDARG00000111614	znf1183	90	55.474	ENSDARG00000109703	FO834825.1	100	55.474
ENSDARG00000111614	znf1183	85	45.740	ENSDARG00000099618	si:dkey-1b17.6	99	52.500
ENSDARG00000111614	znf1183	88	54.037	ENSDARG00000103954	znf1152	97	54.037
ENSDARG00000111614	znf1183	84	60.633	ENSDARG00000100915	si:ch211-255f4.7	99	60.633
ENSDARG00000111614	znf1183	88	48.649	ENSDARG00000078159	zgc:175284	100	45.763
ENSDARG00000111614	znf1183	87	54.077	ENSDARG00000104065	znf1154	97	54.077
ENSDARG00000111614	znf1183	88	57.143	ENSDARG00000094736	znf1157	98	57.143
ENSDARG00000111614	znf1183	88	53.585	ENSDARG00000105056	znf45l	100	53.585
ENSDARG00000111614	znf1183	92	57.143	ENSDARG00000100882	znf1154	98	60.993
ENSDARG00000111614	znf1183	82	54.772	ENSDARG00000101044	si:ch73-138e16.6	99	54.772
ENSDARG00000111614	znf1183	81	50.667	ENSDARG00000015482	zgc:113518	93	47.727
ENSDARG00000111614	znf1183	100	47.293	ENSDARG00000098613	si:dkey-15h8.16	98	49.533
ENSDARG00000111614	znf1183	88	49.640	ENSDARG00000078281	zgc:173575	100	50.000
ENSDARG00000111614	znf1183	84	58.286	ENSDARG00000077712	zgc:113886	88	53.448
ENSDARG00000111614	znf1183	100	48.991	ENSDARG00000102678	znf1181	98	51.411
ENSDARG00000111614	znf1183	93	50.379	ENSDARG00000095704	si:dkey-4c15.13	99	57.692
ENSDARG00000111614	znf1183	100	58.125	ENSDARG00000100361	znf1174	100	58.125
ENSDARG00000111614	znf1183	89	52.652	ENSDARG00000115857	znf1001	96	54.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000111614	znf1183	84	45.946	ENSACIG00000007882	-	73	45.946	Amphilophus_citrinellus
ENSDARG00000111614	znf1183	80	45.695	ENSACIG00000008886	znf1164	81	45.695	Amphilophus_citrinellus
ENSDARG00000111614	znf1183	81	47.872	ENSACLG00000000521	-	99	47.872	Astatotilapia_calliptera
ENSDARG00000111614	znf1183	91	41.290	ENSACLG00000017449	-	62	41.290	Astatotilapia_calliptera
ENSDARG00000111614	znf1183	80	52.941	ENSAMXG00000043291	-	64	52.941	Astyanax_mexicanus
ENSDARG00000111614	znf1183	89	44.177	ENSEBUG00000015073	-	91	46.414	Eptatretus_burgeri
ENSDARG00000111614	znf1183	97	51.111	ENSHBUG00000018916	-	94	51.111	Haplochromis_burtoni
ENSDARG00000111614	znf1183	97	51.786	ENSMZEG00005007426	-	71	51.786	Maylandia_zebra
ENSDARG00000111614	znf1183	81	50.862	ENSMZEG00005005162	-	90	50.862	Maylandia_zebra
ENSDARG00000111614	znf1183	81	39.785	ENSMZEG00005022161	-	91	40.714	Maylandia_zebra
ENSDARG00000111614	znf1183	97	48.744	ENSMZEG00005026470	-	62	48.744	Maylandia_zebra
ENSDARG00000111614	znf1183	82	41.216	ENSMZEG00005025568	-	80	41.216	Maylandia_zebra
ENSDARG00000111614	znf1183	91	50.000	ENSMZEG00005027943	-	78	51.802	Maylandia_zebra
ENSDARG00000111614	znf1183	84	46.154	ENSONIG00000013908	-	100	46.154	Oreochromis_niloticus
ENSDARG00000111614	znf1183	82	43.558	ENSPKIG00000020324	-	71	43.558	Paramormyrops_kingsleyae
ENSDARG00000111614	znf1183	81	43.478	ENSPNYG00000024183	zgc:173577	99	43.478	Pundamilia_nyererei
ENSDARG00000111614	znf1183	89	40.083	ENSSPAG00000006539	-	96	40.083	Stegastes_partitus