EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000111899 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171435
Alias: -
Full Name: zgc:171435
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 12944 bases
Position: chr22:2431585-2444528
Accession: ZDB-GENE-080305-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000133008	zf-C2H2	PF00096.26	1.6e-32	1	5
ENSDARP00000133008	zf-C2H2	PF00096.26	1.6e-32	2	5
ENSDARP00000133008	zf-C2H2	PF00096.26	1.6e-32	3	5
ENSDARP00000133008	zf-C2H2	PF00096.26	1.6e-32	4	5
ENSDARP00000133008	zf-C2H2	PF00096.26	1.6e-32	5	5
ENSDARP00000133008	zf-met	PF12874.7	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000167758	-	876	-	ENSDARP00000133008	291 (aa)	-	A0A0N4STV8

Gene Model

Click here to download ENSDARG00000111899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000111899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000111899	zgc:171435	90	64.314	ENSDARG00000104065	znf1154	97	64.314
ENSDARG00000111899	zgc:171435	83	53.968	ENSDARG00000014775	zgc:113220	99	53.968
ENSDARG00000111899	zgc:171435	89	61.084	ENSDARG00000071725	znf1167	99	57.426
ENSDARG00000111899	zgc:171435	73	56.604	ENSDARG00000106565	CABZ01066720.1	94	56.604
ENSDARG00000111899	zgc:171435	90	61.290	ENSDARG00000088507	znf982	100	61.290
ENSDARG00000111899	zgc:171435	89	61.348	ENSDARG00000094736	znf1157	99	71.795
ENSDARG00000111899	zgc:171435	89	51.712	ENSDARG00000053165	zgc:113377	91	51.712
ENSDARG00000111899	zgc:171435	80	74.026	ENSDARG00000073821	znf1177	89	74.026
ENSDARG00000111899	zgc:171435	92	50.410	ENSDARG00000094309	si:ch73-92e7.6	100	50.410
ENSDARG00000111899	zgc:171435	74	55.507	ENSDARG00000090740	zmp:0000001003	100	59.406
ENSDARG00000111899	zgc:171435	89	54.645	ENSDARG00000102678	znf1181	89	54.645
ENSDARG00000111899	zgc:171435	89	70.395	ENSDARG00000102053	znf1164	100	69.828
ENSDARG00000111899	zgc:171435	90	55.072	ENSDARG00000100544	zgc:173486	98	55.072
ENSDARG00000111899	zgc:171435	89	54.651	ENSDARG00000113011	zgc:113102	95	54.651
ENSDARG00000111899	zgc:171435	88	42.069	ENSDARG00000077085	zgc:110821	94	56.667
ENSDARG00000111899	zgc:171435	70	61.386	ENSDARG00000102411	CR847850.1	91	61.386
ENSDARG00000111899	zgc:171435	89	57.812	ENSDARG00000101885	si:dkey-20i20.11	97	57.812
ENSDARG00000111899	zgc:171435	89	58.687	ENSDARG00000071790	znf1153	90	58.687
ENSDARG00000111899	zgc:171435	89	68.421	ENSDARG00000071833	znf1162	100	68.421
ENSDARG00000111899	zgc:171435	89	58.247	ENSDARG00000092246	si:dkey-20i20.3	83	54.545
ENSDARG00000111899	zgc:171435	78	55.947	ENSDARG00000105074	BX000701.2	94	55.947
ENSDARG00000111899	zgc:171435	89	56.701	ENSDARG00000071714	znf983	98	56.701
ENSDARG00000111899	zgc:171435	88	61.745	ENSDARG00000100882	znf1154	91	61.745
ENSDARG00000111899	zgc:171435	89	59.829	ENSDARG00000099618	si:dkey-1b17.6	89	59.829
ENSDARG00000111899	zgc:171435	89	51.550	ENSDARG00000101044	si:ch73-138e16.6	96	51.550
ENSDARG00000111899	zgc:171435	79	57.965	ENSDARG00000099172	BX000701.1	94	57.965
ENSDARG00000111899	zgc:171435	89	54.093	ENSDARG00000092605	znf1003	92	54.093
ENSDARG00000111899	zgc:171435	89	55.598	ENSDARG00000109703	FO834825.1	80	55.598
ENSDARG00000111899	zgc:171435	69	56.281	ENSDARG00000098923	zgc:173577	90	56.281
ENSDARG00000111899	zgc:171435	90	50.570	ENSDARG00000103827	znf1144	98	63.529
ENSDARG00000111899	zgc:171435	69	57.576	ENSDARG00000078814	si:dkey-34m19.3	77	57.576
ENSDARG00000111899	zgc:171435	89	54.187	ENSDARG00000100803	zgc:173517	100	54.187
ENSDARG00000111899	zgc:171435	89	53.937	ENSDARG00000078159	zgc:175284	100	53.937
ENSDARG00000111899	zgc:171435	89	55.336	ENSDARG00000098613	si:dkey-15h8.16	90	55.336
ENSDARG00000111899	zgc:171435	89	55.941	ENSDARG00000100587	zgc:113886	100	47.674
ENSDARG00000111899	zgc:171435	89	52.174	ENSDARG00000116814	CU570894.2	99	52.174
ENSDARG00000111899	zgc:171435	89	63.529	ENSDARG00000100361	znf1174	80	63.529
ENSDARG00000111899	zgc:171435	69	57.789	ENSDARG00000103530	zgc:113102	90	57.789
ENSDARG00000111899	zgc:171435	89	58.893	ENSDARG00000112141	znf1169	83	59.684
ENSDARG00000111899	zgc:171435	89	64.135	ENSDARG00000115326	znf1002	90	64.135
ENSDARG00000111899	zgc:171435	89	54.271	ENSDARG00000101694	znf1184	96	54.271
ENSDARG00000111899	zgc:171435	71	64.467	ENSDARG00000077712	zgc:113886	88	56.410
ENSDARG00000111899	zgc:171435	89	46.429	ENSDARG00000088927	CR450793.1	95	46.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000111899	zgc:171435	69	46.207	ENSACIG00000008886	znf1164	80	46.207	Amphilophus_citrinellus
ENSDARG00000111899	zgc:171435	88	44.262	ENSATEG00000008683	si:ch211-241b2.1	90	41.923	Anabas_testudineus
ENSDARG00000111899	zgc:171435	60	46.512	ENSACLG00000000521	-	93	46.512	Astatotilapia_calliptera
ENSDARG00000111899	zgc:171435	71	51.256	ENSAMXG00000041650	-	92	51.256	Astyanax_mexicanus
ENSDARG00000111899	zgc:171435	89	45.902	ENSMZEG00005027943	-	81	50.538	Maylandia_zebra
ENSDARG00000111899	zgc:171435	90	47.712	ENSMZEG00005026470	-	70	47.712	Maylandia_zebra
ENSDARG00000111899	zgc:171435	69	42.105	ENSMZEG00005005162	-	78	42.105	Maylandia_zebra
ENSDARG00000111899	zgc:171435	70	41.148	ENSMZEG00005022161	-	91	45.283	Maylandia_zebra
ENSDARG00000111899	zgc:171435	77	41.748	ENSMZEG00005025568	-	81	41.748	Maylandia_zebra
ENSDARG00000111899	zgc:171435	89	42.763	ENSPKIG00000018633	-	63	42.763	Paramormyrops_kingsleyae
ENSDARG00000111899	zgc:171435	81	40.476	ENSPKIG00000020324	-	60	40.476	Paramormyrops_kingsleyae
ENSDARG00000111899	zgc:171435	71	42.857	ENSPMGG00000001558	znf1174	52	42.857	Periophthalmus_magnuspinnatus
ENSDARG00000111899	zgc:171435	71	39.320	ENSPNYG00000024183	zgc:173577	99	39.320	Pundamilia_nyererei
ENSDARG00000111899	zgc:171435	89	48.913	ENSSDUG00000008682	-	100	48.913	Seriola_dumerili
ENSDARG00000111899	zgc:171435	80	33.191	ENSSPAG00000009426	-	82	33.113	Stegastes_partitus