EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000112103 (Gene tree)
Gene ID: 570343
Gene Symbol: si:dkey-16p19.1
Alias: -
Full Name: si:dkey-16p19.1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6173 bases
Position: chr4:41082518-41088690
Accession: ZDB-GENE-120709-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000126356	zf-C2H2	PF00096.26	1.9e-45	1	7
ENSDARP00000126356	zf-C2H2	PF00096.26	1.9e-45	2	7
ENSDARP00000126356	zf-C2H2	PF00096.26	1.9e-45	3	7
ENSDARP00000126356	zf-C2H2	PF00096.26	1.9e-45	4	7
ENSDARP00000126356	zf-C2H2	PF00096.26	1.9e-45	5	7
ENSDARP00000126356	zf-C2H2	PF00096.26	1.9e-45	6	7
ENSDARP00000126356	zf-C2H2	PF00096.26	1.9e-45	7	7
ENSDARP00000139968	zf-C2H2	PF00096.26	1.9e-45	1	7
ENSDARP00000139968	zf-C2H2	PF00096.26	1.9e-45	2	7
ENSDARP00000139968	zf-C2H2	PF00096.26	1.9e-45	3	7
ENSDARP00000139968	zf-C2H2	PF00096.26	1.9e-45	4	7
ENSDARP00000139968	zf-C2H2	PF00096.26	1.9e-45	5	7
ENSDARP00000139968	zf-C2H2	PF00096.26	1.9e-45	6	7
ENSDARP00000139968	zf-C2H2	PF00096.26	1.9e-45	7	7
ENSDARP00000126356	zf-met	PF12874.7	2.9e-06	1	1
ENSDARP00000139968	zf-met	PF12874.7	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000151846	-	1277	XM_005168168	ENSDARP00000126356	320 (aa)	XP_005168225	K7DY30
ENSDART00000164388	-	963	-	ENSDARP00000139968	320 (aa)	-	K7DY30

Gene Model

Click here to download ENSDARG00000112103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000112103's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000112103	si:dkey-16p19.1	99	58.894	ENSDARG00000102600	CABZ01003344.1	99	68.127
ENSDARG00000112103	si:dkey-16p19.1	86	70.588	ENSDARG00000112606	BX248128.2	99	70.588
ENSDARG00000112103	si:dkey-16p19.1	99	59.631	ENSDARG00000094558	si:dkeyp-53e4.1	99	57.670
ENSDARG00000112103	si:dkey-16p19.1	99	67.729	ENSDARG00000098270	znf1053	99	67.729
ENSDARG00000112103	si:dkey-16p19.1	99	68.127	ENSDARG00000104074	znf1052	99	68.127
ENSDARG00000112103	si:dkey-16p19.1	99	91.705	ENSDARG00000111550	CABZ01002702.1	99	91.705
ENSDARG00000112103	si:dkey-16p19.1	99	47.198	ENSDARG00000074365	zgc:171901	100	59.756
ENSDARG00000112103	si:dkey-16p19.1	99	65.698	ENSDARG00000098536	si:dkey-25i10.1	100	65.698
ENSDARG00000112103	si:dkey-16p19.1	100	69.113	ENSDARG00000098087	si:dkey-30f3.2	99	69.113
ENSDARG00000112103	si:dkey-16p19.1	100	69.859	ENSDARG00000100001	znf1096	99	68.451
ENSDARG00000112103	si:dkey-16p19.1	99	57.306	ENSDARG00000091477	znf1066	100	63.200
ENSDARG00000112103	si:dkey-16p19.1	99	66.201	ENSDARG00000098430	znf1078	99	65.084
ENSDARG00000112103	si:dkey-16p19.1	86	93.091	ENSDARG00000100653	si:dkeyp-82b4.6	98	93.091
ENSDARG00000112103	si:dkey-16p19.1	99	59.894	ENSDARG00000103471	si:dkey-199m13.4	99	62.154
ENSDARG00000112103	si:dkey-16p19.1	99	47.596	ENSDARG00000074298	znf1015	99	51.765
ENSDARG00000112103	si:dkey-16p19.1	99	69.721	ENSDARG00000096210	znf1050	99	69.721
ENSDARG00000112103	si:dkey-16p19.1	91	59.718	ENSDARG00000116920	BX465848.2	91	64.430
ENSDARG00000112103	si:dkey-16p19.1	100	68.807	ENSDARG00000110658	zgc:174696	99	68.807
ENSDARG00000112103	si:dkey-16p19.1	99	62.054	ENSDARG00000102837	znf1145	100	62.946
ENSDARG00000112103	si:dkey-16p19.1	100	62.245	ENSDARG00000103310	znf1053	99	62.245
ENSDARG00000112103	si:dkey-16p19.1	99	57.349	ENSDARG00000098071	znf1049	99	69.600
ENSDARG00000112103	si:dkey-16p19.1	99	60.686	ENSDARG00000110229	zgc:173702	99	62.462
ENSDARG00000112103	si:dkey-16p19.1	100	64.542	ENSDARG00000086449	znf1055	99	64.542
ENSDARG00000112103	si:dkey-16p19.1	90	63.068	ENSDARG00000116177	znf1127	92	65.424
ENSDARG00000112103	si:dkey-16p19.1	99	58.575	ENSDARG00000102673	si:dkey-26i24.1	99	62.000
ENSDARG00000112103	si:dkey-16p19.1	99	65.363	ENSDARG00000101327	znf1076	99	64.804
ENSDARG00000112103	si:dkey-16p19.1	99	59.367	ENSDARG00000105306	si:dkeyp-44b5.5	99	62.462
ENSDARG00000112103	si:dkey-16p19.1	99	65.922	ENSDARG00000099736	CABZ01075078.1	99	65.363
ENSDARG00000112103	si:dkey-16p19.1	99	43.544	ENSDARG00000089715	si:cabz01054394.7	94	43.544
ENSDARG00000112103	si:dkey-16p19.1	99	65.084	ENSDARG00000115655	znf1078	99	64.246
ENSDARG00000112103	si:dkey-16p19.1	90	63.415	ENSDARG00000095605	CR846087.3	99	63.110
ENSDARG00000112103	si:dkey-16p19.1	99	58.311	ENSDARG00000100842	si:ch211-223a21.4	99	57.102
ENSDARG00000112103	si:dkey-16p19.1	100	70.031	ENSDARG00000102791	zgc:174704	99	70.031
ENSDARG00000112103	si:dkey-16p19.1	99	57.105	ENSDARG00000098901	CABZ01002768.1	100	57.798
ENSDARG00000112103	si:dkey-16p19.1	100	70.986	ENSDARG00000109381	CU457778.2	99	69.577
ENSDARG00000112103	si:dkey-16p19.1	99	49.180	ENSDARG00000096828	si:ch73-144d13.7	98	45.566
ENSDARG00000112103	si:dkey-16p19.1	99	65.116	ENSDARG00000100509	si:dkey-82i20.2	100	65.116
ENSDARG00000112103	si:dkey-16p19.1	99	66.760	ENSDARG00000114947	BX465848.1	99	66.480
ENSDARG00000112103	si:dkey-16p19.1	99	58.173	ENSDARG00000091994	znf1048	99	67.729
ENSDARG00000112103	si:dkey-16p19.1	99	57.933	ENSDARG00000092938	znf1047	99	67.331
ENSDARG00000112103	si:dkey-16p19.1	99	97.235	ENSDARG00000102008	si:dkey-72l17.6	100	95.666
ENSDARG00000112103	si:dkey-16p19.1	99	97.179	ENSDARG00000114793	CU182823.4	98	97.179
ENSDARG00000112103	si:dkey-16p19.1	99	59.631	ENSDARG00000103636	zgc:173702	99	61.538
ENSDARG00000112103	si:dkey-16p19.1	99	69.577	ENSDARG00000105137	zgc:173705	99	68.451
ENSDARG00000112103	si:dkey-16p19.1	99	67.606	ENSDARG00000114437	zgc:173705	99	67.606
ENSDARG00000112103	si:dkey-16p19.1	99	64.444	ENSDARG00000116216	znf1046	99	67.729
ENSDARG00000112103	si:dkey-16p19.1	99	55.911	ENSDARG00000093994	znf1058	100	68.273
ENSDARG00000112103	si:dkey-16p19.1	99	90.343	ENSDARG00000102561	AL645691.1	97	90.343
ENSDARG00000112103	si:dkey-16p19.1	99	63.566	ENSDARG00000100961	zgc:174653	92	64.848
ENSDARG00000112103	si:dkey-16p19.1	99	68.127	ENSDARG00000098986	znf1040	99	68.127
ENSDARG00000112103	si:dkey-16p19.1	99	53.531	ENSDARG00000076272	znf1041	99	73.307
ENSDARG00000112103	si:dkey-16p19.1	99	66.760	ENSDARG00000098196	znf1077	99	66.480
ENSDARG00000112103	si:dkey-16p19.1	100	70.141	ENSDARG00000112725	si:dkey-22h13.2	99	68.451
ENSDARG00000112103	si:dkey-16p19.1	100	66.932	ENSDARG00000088000	znf1057	99	66.932
ENSDARG00000112103	si:dkey-16p19.1	100	70.986	ENSDARG00000115450	CABZ01012382.1	99	69.859
ENSDARG00000112103	si:dkey-16p19.1	99	56.731	ENSDARG00000101137	znf999	97	75.490
ENSDARG00000112103	si:dkey-16p19.1	99	59.367	ENSDARG00000096041	si:ch211-162i8.2	99	57.955
ENSDARG00000112103	si:dkey-16p19.1	100	91.562	ENSDARG00000103721	si:dkey-122c11.7	100	91.562
ENSDARG00000112103	si:dkey-16p19.1	100	66.534	ENSDARG00000105067	znf1043	99	66.534
ENSDARG00000112103	si:dkey-16p19.1	99	59.894	ENSDARG00000090160	zgc:173709	99	62.154
ENSDARG00000112103	si:dkey-16p19.1	100	92.260	ENSDARG00000113808	si:dkeyp-82b4.6	96	92.260
ENSDARG00000112103	si:dkey-16p19.1	91	66.361	ENSDARG00000103495	zgc:173714	99	66.361
ENSDARG00000112103	si:dkey-16p19.1	99	47.097	ENSDARG00000105692	CABZ01069022.1	99	46.185
ENSDARG00000112103	si:dkey-16p19.1	99	60.052	ENSDARG00000104407	BX649453.1	99	55.928
ENSDARG00000112103	si:dkey-16p19.1	99	69.721	ENSDARG00000089814	znf1042	99	69.721
ENSDARG00000112103	si:dkey-16p19.1	99	44.375	ENSDARG00000101365	si:cabz01021430.2	100	50.847
ENSDARG00000112103	si:dkey-16p19.1	100	69.577	ENSDARG00000096189	si:dkey-54j5.2	99	69.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000112103	si:dkey-16p19.1	80	41.667	ENSOMEG00000005928	-	53	41.053	Oryzias_melastigma
ENSDARG00000112103	si:dkey-16p19.1	82	48.810	ENSPREG00000005015	-	54	51.299	Poecilia_reticulata
ENSDARG00000112103	si:dkey-16p19.1	77	44.643	ENSSDUG00000015456	-	51	39.130	Seriola_dumerili

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function