EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000112136 (Gene tree)
Gene ID: -
Gene Symbol: CABZ01079748.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 32129 bases
Position: chr17:654759-686887
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000153311	ResIII	PF04851.15	1.6e-19	1	1
ENSDARP00000153311	DEAD	PF00270.29	1.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000193703	CABZ01079748.1-201	894	-	ENSDARP00000153311	297 (aa)	-	A0A2R8QLE4

Gene Model

Click here to download ENSDARG00000112136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000112136's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000112136	CABZ01079748.1	91	73.091	ENSAPOG00000014274	-	63	73.091	Acanthochromis_polyacanthus
ENSDARG00000112136	CABZ01079748.1	91	70.260	ENSAOCG00000005964	-	99	70.260	Amphiprion_ocellaris
ENSDARG00000112136	CABZ01079748.1	91	70.632	ENSAPEG00000018344	-	99	70.632	Amphiprion_percula
ENSDARG00000112136	CABZ01079748.1	100	64.262	ENSBTAG00000002612	FANCM	82	64.262	Bos_taurus
ENSDARG00000112136	CABZ01079748.1	90	55.515	ENSCING00000002994	-	99	55.515	Ciona_intestinalis
ENSDARG00000112136	CABZ01079748.1	76	68.889	ENSEBUG00000014849	-	65	64.113	Eptatretus_burgeri
ENSDARG00000112136	CABZ01079748.1	88	75.655	ENSFHEG00000006371	-	60	78.541	Fundulus_heteroclitus
ENSDARG00000112136	CABZ01079748.1	91	72.325	ENSGAFG00000002104	-	99	72.325	Gambusia_affinis
ENSDARG00000112136	CABZ01079748.1	76	68.444	ENSGAGG00000007068	-	65	65.462	Gopherus_agassizii
ENSDARG00000112136	CABZ01079748.1	91	78.182	ENSIPUG00000014629	fancm	60	79.675	Ictalurus_punctatus
ENSDARG00000112136	CABZ01079748.1	91	73.818	ENSKMAG00000009391	-	66	73.818	Kryptolebias_marmoratus
ENSDARG00000112136	CABZ01079748.1	91	74.453	ENSMALG00000013187	-	63	74.453	Monopterus_albus
ENSDARG00000112136	CABZ01079748.1	89	70.566	ENSNBRG00000024095	-	99	70.566	Neolamprologus_brichardi
ENSDARG00000112136	CABZ01079748.1	91	72.727	ENSPKIG00000000861	-	63	72.727	Paramormyrops_kingsleyae
ENSDARG00000112136	CABZ01079748.1	89	73.684	ENSPMGG00000010830	-	99	73.684	Periophthalmus_magnuspinnatus
ENSDARG00000112136	CABZ01079748.1	60	65.730	ENSPMAG00000003340	-	65	65.730	Petromyzon_marinus
ENSDARG00000112136	CABZ01079748.1	89	70.943	ENSPNYG00000018775	-	99	70.943	Pundamilia_nyererei
ENSDARG00000112136	CABZ01079748.1	89	76.515	ENSSFOG00015017948	-	99	76.515	Scleropages_formosus
ENSDARG00000112136	CABZ01079748.1	91	74.638	ENSSMAG00000019903	-	65	74.721	Scophthalmus_maximus
ENSDARG00000112136	CABZ01079748.1	95	71.181	ENSSDUG00000016682	-	80	71.181	Seriola_dumerili
ENSDARG00000112136	CABZ01079748.1	89	73.106	ENSSPAG00000016930	-	81	73.106	Stegastes_partitus
ENSDARG00000112136	CABZ01079748.1	97	65.436	ENSXETG00000003046	fancm	66	65.333	Xenopus_tropicalis
ENSDARG00000112136	CABZ01079748.1	86	70.189	ENSXCOG00000004854	-	82	70.189	Xiphophorus_couchianus