EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000112256 (Gene tree)
Gene ID: 101885168
Gene Symbol: rpp25b
Alias: -
Full Name: ribonuclease P and MRP subunit p25%2C b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7704 bases
Position: chr18:783936-791639
Accession: ZDB-GENE-170530-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000157373	Alba	PF01918.21	3.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000193357	-	1801	XM_021467571	ENSDARP00000157373	335 (aa)	XP_021323246	A0A2R8QR57

Gene Model

Click here to download ENSDARG00000112256's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000112256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000112256	rpp25b	54	37.255	ENSAPOG00000005638	rpp25l	96	37.255	Acanthochromis_polyacanthus
ENSDARG00000112256	rpp25b	51	62.921	ENSAMXG00000044094	rpp25b	76	62.921	Astyanax_mexicanus
ENSDARG00000112256	rpp25b	51	34.314	ENSPMGG00000009633	-	93	34.314	Periophthalmus_magnuspinnatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000172	ribonuclease MRP complex	-	IEA	Component
GO:0001682	tRNA 5'-leader removal	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function