EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000112572 (Gene tree)
Gene ID: -
Gene Symbol: CR293507.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 3058 bases
Position: chr16:52536999-52540056
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000150264	RRM_1	PF00076.22	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000188304	CR293507.1-201	183	-	ENSDARP00000150264	60 (aa)	-	A0A2R8Q7R3

Gene Model

Click here to download ENSDARG00000112572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000112572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000112572	CR293507.1	92	46.667	ENSDARG00000057484	srsf2a	51	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000112572	CR293507.1	97	84.483	ENSG00000154548	SRSF12	73	53.333	Homo_sapiens
ENSDARG00000112572	CR293507.1	100	88.333	ENSAPOG00000024545	-	94	88.333	Acanthochromis_polyacanthus
ENSDARG00000112572	CR293507.1	100	88.333	ENSACIG00000001537	-	86	88.333	Amphilophus_citrinellus
ENSDARG00000112572	CR293507.1	100	88.333	ENSACIG00000018697	-	88	88.333	Amphilophus_citrinellus
ENSDARG00000112572	CR293507.1	100	85.000	ENSAPEG00000016160	-	85	85.000	Amphiprion_percula
ENSDARG00000112572	CR293507.1	100	86.667	ENSATEG00000003493	-	83	86.667	Anabas_testudineus
ENSDARG00000112572	CR293507.1	100	95.000	ENSAMXG00000031867	-	87	95.000	Astyanax_mexicanus
ENSDARG00000112572	CR293507.1	100	81.667	ENSCHIG00000023999	-	87	81.667	Capra_hircus
ENSDARG00000112572	CR293507.1	97	68.966	ENSCHIG00000011877	-	76	68.966	Capra_hircus
ENSDARG00000112572	CR293507.1	93	85.714	ENSFHEG00000000365	-	50	85.714	Fundulus_heteroclitus
ENSDARG00000112572	CR293507.1	100	85.000	ENSHCOG00000005897	-	88	85.000	Hippocampus_comes
ENSDARG00000112572	CR293507.1	100	85.000	ENSHCOG00000008417	-	69	85.000	Hippocampus_comes
ENSDARG00000112572	CR293507.1	100	93.333	ENSIPUG00000023118	-	57	93.333	Ictalurus_punctatus
ENSDARG00000112572	CR293507.1	100	86.667	ENSLBEG00000012669	-	91	86.667	Labrus_bergylta
ENSDARG00000112572	CR293507.1	93	85.714	ENSMAMG00000008111	-	85	85.714	Mastacembelus_armatus
ENSDARG00000112572	CR293507.1	100	83.333	ENSMAMG00000007646	-	67	83.333	Mastacembelus_armatus
ENSDARG00000112572	CR293507.1	97	81.034	ENSMAUG00000009812	-	85	81.034	Mesocricetus_auratus
ENSDARG00000112572	CR293507.1	100	88.333	ENSMMOG00000013350	-	86	88.333	Mola_mola
ENSDARG00000112572	CR293507.1	100	88.333	ENSNBRG00000010616	-	86	88.333	Neolamprologus_brichardi
ENSDARG00000112572	CR293507.1	95	80.702	ENSODEG00000003118	-	80	80.702	Octodon_degus
ENSDARG00000112572	CR293507.1	95	71.930	ENSODEG00000000894	-	84	71.930	Octodon_degus
ENSDARG00000112572	CR293507.1	100	95.000	ENSPKIG00000000613	-	67	95.000	Paramormyrops_kingsleyae
ENSDARG00000112572	CR293507.1	97	74.138	ENSPEMG00000021564	-	81	74.138	Peromyscus_maniculatus_bairdii
ENSDARG00000112572	CR293507.1	100	96.667	ENSPNAG00000009501	-	91	96.667	Pygocentrus_nattereri
ENSDARG00000112572	CR293507.1	97	79.310	ENSSMAG00000018546	-	77	79.310	Scophthalmus_maximus
ENSDARG00000112572	CR293507.1	100	78.333	ENSSLDG00000000417	-	79	78.333	Seriola_lalandi_dorsalis
ENSDARG00000112572	CR293507.1	100	85.000	ENSSLDG00000002710	-	97	85.000	Seriola_lalandi_dorsalis
ENSDARG00000112572	CR293507.1	100	79.032	ENSSPUG00000016216	-	93	79.032	Sphenodon_punctatus
ENSDARG00000112572	CR293507.1	100	88.333	ENSSPAG00000001821	-	86	88.333	Stegastes_partitus
ENSDARG00000112572	CR293507.1	100	88.333	ENSTRUG00000019904	-	82	88.333	Takifugu_rubripes