EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000112725 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-22h13.2
Alias: -
Full Name: si:dkey-22h13.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7377 bases
Position: chr4:40357513-40364889
Accession: ZDB-GENE-120703-42
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	1	9
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	2	9
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	3	9
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	4	9
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	5	9
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	6	9
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	7	9
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	8	9
ENSDARP00000117200	zf-C2H2	PF00096.26	8.6e-58	9	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	1	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	2	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	3	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	4	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	5	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	6	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	7	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	8	9
ENSDARP00000126578	zf-C2H2	PF00096.26	8.6e-58	9	9
ENSDARP00000117200	zf-met	PF12874.7	1.4e-08	1	2
ENSDARP00000117200	zf-met	PF12874.7	1.4e-08	2	2
ENSDARP00000126578	zf-met	PF12874.7	1.4e-08	1	2
ENSDARP00000126578	zf-met	PF12874.7	1.4e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000133544	-	1080	-	ENSDARP00000117200	359 (aa)	-	E9QCJ2
ENSDART00000151957	-	1804	-	ENSDARP00000126578	359 (aa)	-	E9QCJ2

Gene Model

Click here to download ENSDARG00000112725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000112725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000112725	si:dkey-22h13.2	100	81.337	ENSDARG00000114437	zgc:173705	100	81.337
ENSDARG00000112725	si:dkey-22h13.2	99	64.962	ENSDARG00000100961	zgc:174653	100	59.783
ENSDARG00000112725	si:dkey-22h13.2	99	69.014	ENSDARG00000103721	si:dkey-122c11.7	100	70.704
ENSDARG00000112725	si:dkey-22h13.2	99	71.074	ENSDARG00000116216	znf1046	95	71.074
ENSDARG00000112725	si:dkey-22h13.2	97	50.327	ENSDARG00000102800	CABZ01081752.2	99	50.327
ENSDARG00000112725	si:dkey-22h13.2	99	63.484	ENSDARG00000092938	znf1047	99	62.291
ENSDARG00000112725	si:dkey-22h13.2	99	69.832	ENSDARG00000098087	si:dkey-30f3.2	99	68.715
ENSDARG00000112725	si:dkey-22h13.2	99	67.277	ENSDARG00000100842	si:ch211-223a21.4	99	66.580
ENSDARG00000112725	si:dkey-22h13.2	99	62.530	ENSDARG00000098986	znf1040	99	61.098
ENSDARG00000112725	si:dkey-22h13.2	88	58.301	ENSDARG00000094484	si:ch211-162i8.4	97	63.725
ENSDARG00000112725	si:dkey-22h13.2	99	71.229	ENSDARG00000102791	zgc:174704	99	69.553
ENSDARG00000112725	si:dkey-22h13.2	99	68.286	ENSDARG00000104407	BX649453.1	99	67.775
ENSDARG00000112725	si:dkey-22h13.2	99	53.532	ENSDARG00000092507	znf1013	98	54.596
ENSDARG00000112725	si:dkey-22h13.2	100	96.100	ENSDARG00000096189	si:dkey-54j5.2	100	96.100
ENSDARG00000112725	si:dkey-22h13.2	99	63.397	ENSDARG00000098071	znf1049	100	62.919
ENSDARG00000112725	si:dkey-22h13.2	99	60.048	ENSDARG00000101137	znf999	100	74.286
ENSDARG00000112725	si:dkey-22h13.2	99	69.613	ENSDARG00000115655	znf1078	99	69.613
ENSDARG00000112725	si:dkey-22h13.2	99	59.391	ENSDARG00000098991	znf1095	98	59.391
ENSDARG00000112725	si:dkey-22h13.2	99	55.966	ENSDARG00000103346	si:dkeyp-85d8.5	99	55.966
ENSDARG00000112725	si:dkey-22h13.2	99	63.910	ENSDARG00000089814	znf1042	99	69.504
ENSDARG00000112725	si:dkey-22h13.2	92	58.631	ENSDARG00000100509	si:dkey-82i20.2	99	58.631
ENSDARG00000112725	si:dkey-22h13.2	99	63.246	ENSDARG00000102600	CABZ01003344.1	99	68.794
ENSDARG00000112725	si:dkey-22h13.2	99	61.009	ENSDARG00000091477	znf1066	100	65.915
ENSDARG00000112725	si:dkey-22h13.2	91	64.607	ENSDARG00000116177	znf1127	92	64.045
ENSDARG00000112725	si:dkey-22h13.2	99	63.007	ENSDARG00000091994	znf1048	99	60.621
ENSDARG00000112725	si:dkey-22h13.2	99	70.994	ENSDARG00000098196	znf1077	99	70.994
ENSDARG00000112725	si:dkey-22h13.2	99	43.923	ENSDARG00000089715	si:cabz01054394.7	94	43.923
ENSDARG00000112725	si:dkey-22h13.2	99	70.166	ENSDARG00000098430	znf1078	99	70.166
ENSDARG00000112725	si:dkey-22h13.2	99	70.157	ENSDARG00000103471	si:dkey-199m13.4	99	69.171
ENSDARG00000112725	si:dkey-22h13.2	99	49.863	ENSDARG00000096856	znf1012	100	49.863
ENSDARG00000112725	si:dkey-22h13.2	100	96.100	ENSDARG00000115450	CABZ01012382.1	100	96.100
ENSDARG00000112725	si:dkey-22h13.2	99	68.451	ENSDARG00000112103	si:dkey-16p19.1	100	70.141
ENSDARG00000112725	si:dkey-22h13.2	99	69.372	ENSDARG00000103636	zgc:173702	99	68.653
ENSDARG00000112725	si:dkey-22h13.2	99	52.528	ENSDARG00000087168	si:ch211-162i8.4	98	52.528
ENSDARG00000112725	si:dkey-22h13.2	99	55.600	ENSDARG00000102027	si:dkey-172k15.11	96	54.412
ENSDARG00000112725	si:dkey-22h13.2	91	62.941	ENSDARG00000113626	znf976	95	62.941
ENSDARG00000112725	si:dkey-22h13.2	98	60.533	ENSDARG00000093994	znf1058	99	61.728
ENSDARG00000112725	si:dkey-22h13.2	99	69.171	ENSDARG00000110229	zgc:173702	99	68.912
ENSDARG00000112725	si:dkey-22h13.2	99	59.318	ENSDARG00000098901	CABZ01002768.1	100	58.530
ENSDARG00000112725	si:dkey-22h13.2	99	69.880	ENSDARG00000102008	si:dkey-72l17.6	100	71.831
ENSDARG00000112725	si:dkey-22h13.2	99	52.830	ENSDARG00000086223	si:ch73-144d13.4	100	52.830
ENSDARG00000112725	si:dkey-22h13.2	99	53.275	ENSDARG00000074298	znf1015	100	53.275
ENSDARG00000112725	si:dkey-22h13.2	99	69.014	ENSDARG00000113808	si:dkeyp-82b4.6	96	70.704
ENSDARG00000112725	si:dkey-22h13.2	99	55.070	ENSDARG00000088000	znf1057	99	70.213
ENSDARG00000112725	si:dkey-22h13.2	99	59.000	ENSDARG00000110852	znf1111	100	56.977
ENSDARG00000112725	si:dkey-22h13.2	99	47.107	ENSDARG00000090942	CABZ01054394.1	98	47.107
ENSDARG00000112725	si:dkey-22h13.2	99	58.234	ENSDARG00000086449	znf1055	99	60.382
ENSDARG00000112725	si:dkey-22h13.2	99	65.161	ENSDARG00000105067	znf1043	99	68.085
ENSDARG00000112725	si:dkey-22h13.2	92	56.848	ENSDARG00000116920	BX465848.2	91	59.827
ENSDARG00000112725	si:dkey-22h13.2	100	61.851	ENSDARG00000076272	znf1041	100	70.671
ENSDARG00000112725	si:dkey-22h13.2	98	54.375	ENSDARG00000097812	si:ch73-144d13.5	99	54.375
ENSDARG00000112725	si:dkey-22h13.2	99	67.470	ENSDARG00000111550	CABZ01002702.1	99	70.281
ENSDARG00000112725	si:dkey-22h13.2	99	61.098	ENSDARG00000096210	znf1050	99	63.723
ENSDARG00000112725	si:dkey-22h13.2	99	52.958	ENSDARG00000093041	si:ch211-234c11.2	88	52.958
ENSDARG00000112725	si:dkey-22h13.2	92	77.946	ENSDARG00000103495	zgc:173714	100	77.946
ENSDARG00000112725	si:dkey-22h13.2	99	69.110	ENSDARG00000090160	zgc:173709	99	68.394
ENSDARG00000112725	si:dkey-22h13.2	99	58.594	ENSDARG00000094443	znf1036	100	58.594
ENSDARG00000112725	si:dkey-22h13.2	99	69.832	ENSDARG00000110658	zgc:174696	99	69.832
ENSDARG00000112725	si:dkey-22h13.2	99	62.768	ENSDARG00000104074	znf1052	99	62.768
ENSDARG00000112725	si:dkey-22h13.2	100	93.593	ENSDARG00000109381	CU457778.2	100	93.593
ENSDARG00000112725	si:dkey-22h13.2	99	70.994	ENSDARG00000114947	BX465848.1	99	70.994
ENSDARG00000112725	si:dkey-22h13.2	99	71.986	ENSDARG00000098270	znf1053	99	71.986
ENSDARG00000112725	si:dkey-22h13.2	100	94.708	ENSDARG00000105137	zgc:173705	100	94.708
ENSDARG00000112725	si:dkey-22h13.2	99	69.613	ENSDARG00000099736	CABZ01075078.1	99	69.613
ENSDARG00000112725	si:dkey-22h13.2	99	72.695	ENSDARG00000103310	znf1053	99	72.695
ENSDARG00000112725	si:dkey-22h13.2	97	47.013	ENSDARG00000103244	CABZ01081752.3	93	47.802
ENSDARG00000112725	si:dkey-22h13.2	99	61.582	ENSDARG00000102561	AL645691.1	97	69.774
ENSDARG00000112725	si:dkey-22h13.2	99	69.110	ENSDARG00000105306	si:dkeyp-44b5.5	99	68.135
ENSDARG00000112725	si:dkey-22h13.2	99	69.061	ENSDARG00000101327	znf1076	99	69.061
ENSDARG00000112725	si:dkey-22h13.2	99	69.372	ENSDARG00000094558	si:dkeyp-53e4.1	99	68.135
ENSDARG00000112725	si:dkey-22h13.2	99	58.407	ENSDARG00000114396	znf1017	100	58.182
ENSDARG00000112725	si:dkey-22h13.2	99	69.110	ENSDARG00000102673	si:dkey-26i24.1	99	68.394
ENSDARG00000112725	si:dkey-22h13.2	91	68.373	ENSDARG00000095605	CR846087.3	99	68.373
ENSDARG00000112725	si:dkey-22h13.2	99	61.340	ENSDARG00000111465	znf1104	98	63.057
ENSDARG00000112725	si:dkey-22h13.2	87	63.987	ENSDARG00000100653	si:dkeyp-82b4.6	98	65.916
ENSDARG00000112725	si:dkey-22h13.2	100	95.543	ENSDARG00000100001	znf1096	100	95.543
ENSDARG00000112725	si:dkey-22h13.2	99	50.409	ENSDARG00000074365	zgc:171901	100	64.198
ENSDARG00000112725	si:dkey-22h13.2	99	69.382	ENSDARG00000114793	CU182823.4	98	71.067
ENSDARG00000112725	si:dkey-22h13.2	92	58.631	ENSDARG00000098536	si:dkey-25i10.1	99	58.631
ENSDARG00000112725	si:dkey-22h13.2	79	76.329	ENSDARG00000112606	BX248128.2	99	76.329
ENSDARG00000112725	si:dkey-22h13.2	99	69.110	ENSDARG00000096041	si:ch211-162i8.2	99	68.135
ENSDARG00000112725	si:dkey-22h13.2	98	54.545	ENSDARG00000109255	si:ch211-234c11.2	99	54.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000112725	si:dkey-22h13.2	69	41.429	ENSCSEG00000011817	-	59	41.429	Cynoglossus_semilaevis
ENSDARG00000112725	si:dkey-22h13.2	82	46.468	ENSFHEG00000021020	-	71	46.468	Fundulus_heteroclitus
ENSDARG00000112725	si:dkey-22h13.2	76	54.945	ENSGMOG00000020024	-	100	54.945	Gadus_morhua
ENSDARG00000112725	si:dkey-22h13.2	99	35.971	ENSKMAG00000011441	-	84	35.971	Kryptolebias_marmoratus
ENSDARG00000112725	si:dkey-22h13.2	99	43.590	ENSORLG00000012434	znf1064	76	43.590	Oryzias_latipes
ENSDARG00000112725	si:dkey-22h13.2	76	46.000	ENSPFOG00000005998	-	54	41.304	Poecilia_formosa
ENSDARG00000112725	si:dkey-22h13.2	78	50.538	ENSPFOG00000022423	-	77	50.538	Poecilia_formosa
ENSDARG00000112725	si:dkey-22h13.2	80	46.766	ENSPFOG00000003366	-	53	46.766	Poecilia_formosa
ENSDARG00000112725	si:dkey-22h13.2	87	41.322	ENSPLAG00000009861	-	53	41.736	Poecilia_latipinna
ENSDARG00000112725	si:dkey-22h13.2	75	44.144	ENSPLAG00000010547	-	60	40.724	Poecilia_latipinna
ENSDARG00000112725	si:dkey-22h13.2	99	44.697	ENSPLAG00000023537	-	93	44.697	Poecilia_latipinna
ENSDARG00000112725	si:dkey-22h13.2	90	50.000	ENSPREG00000005015	-	97	52.074	Poecilia_reticulata
ENSDARG00000112725	si:dkey-22h13.2	74	36.723	ENSSPAG00000017203	-	53	36.723	Stegastes_partitus
ENSDARG00000112725	si:dkey-22h13.2	76	51.765	ENSXETG00000031310	-	69	44.867	Xenopus_tropicalis
ENSDARG00000112725	si:dkey-22h13.2	76	48.980	ENSXCOG00000015435	-	83	48.980	Xiphophorus_couchianus
ENSDARG00000112725	si:dkey-22h13.2	88	45.408	ENSXCOG00000003499	-	60	45.408	Xiphophorus_couchianus
ENSDARG00000112725	si:dkey-22h13.2	74	43.624	ENSXMAG00000024816	-	83	43.624	Xiphophorus_maculatus