EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000113011 (Gene tree)
Gene ID: -
Gene Symbol: zgc:113102
Alias: -
Full Name: zgc:113102
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 113572 bases
Position: chr3:6993107-7106678
Accession: ZDB-GENE-050306-35
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	1	9
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	2	9
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	3	9
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	4	9
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	5	9
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	6	9
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	7	9
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	8	9
ENSDARP00000143795	zf-C2H2	PF00096.26	3.6e-51	9	9
ENSDARP00000145416	zf-C2H2	PF00096.26	6.6e-42	1	7
ENSDARP00000145416	zf-C2H2	PF00096.26	6.6e-42	2	7
ENSDARP00000145416	zf-C2H2	PF00096.26	6.6e-42	3	7
ENSDARP00000145416	zf-C2H2	PF00096.26	6.6e-42	4	7
ENSDARP00000145416	zf-C2H2	PF00096.26	6.6e-42	5	7
ENSDARP00000145416	zf-C2H2	PF00096.26	6.6e-42	6	7
ENSDARP00000145416	zf-C2H2	PF00096.26	6.6e-42	7	7
ENSDARP00000143795	zf-met	PF12874.7	8.3e-11	1	1
ENSDARP00000145416	zf-met	PF12874.7	0.00055	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000187732	-	1374	-	ENSDARP00000145416	248 (aa)	-	A0A2R8PWT7
ENSDART00000175293	-	1731	-	ENSDARP00000143795	367 (aa)	-	A0A286Y9F4

Gene Model

Click here to download ENSDARG00000113011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000113011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000113011	zgc:113102	91	69.333	ENSDARG00000100961	zgc:174653	93	72.519
ENSDARG00000113011	zgc:113102	92	61.278	ENSDARG00000088051	AL935044.1	100	61.278
ENSDARG00000113011	zgc:113102	98	54.545	ENSDARG00000094736	znf1157	95	62.069
ENSDARG00000113011	zgc:113102	96	64.426	ENSDARG00000099890	CU207221.2	99	64.426
ENSDARG00000113011	zgc:113102	93	43.348	ENSDARG00000104807	si:ch73-221f6.3	69	43.348
ENSDARG00000113011	zgc:113102	90	48.961	ENSDARG00000105295	LO017784.1	69	48.961
ENSDARG00000113011	zgc:113102	95	47.893	ENSDARG00000078159	zgc:175284	100	48.780
ENSDARG00000113011	zgc:113102	98	46.275	ENSDARG00000101694	znf1184	96	46.792
ENSDARG00000113011	zgc:113102	95	75.287	ENSDARG00000105074	BX000701.2	100	75.287
ENSDARG00000113011	zgc:113102	92	48.529	ENSDARG00000105075	BX324216.2	84	48.529
ENSDARG00000113011	zgc:113102	99	63.158	ENSDARG00000078281	zgc:173575	100	63.158
ENSDARG00000113011	zgc:113102	95	56.543	ENSDARG00000105056	znf45l	100	56.543
ENSDARG00000113011	zgc:113102	100	61.765	ENSDARG00000109703	FO834825.1	98	61.765
ENSDARG00000113011	zgc:113102	100	51.807	ENSDARG00000100361	znf1174	89	51.807
ENSDARG00000113011	zgc:113102	100	61.139	ENSDARG00000100803	zgc:173517	100	61.139
ENSDARG00000113011	zgc:113102	95	48.634	ENSDARG00000071790	znf1153	85	48.958
ENSDARG00000113011	zgc:113102	95	50.996	ENSDARG00000115857	znf1001	100	52.247
ENSDARG00000113011	zgc:113102	87	47.020	ENSDARG00000115737	AL954741.2	99	47.020
ENSDARG00000113011	zgc:113102	92	53.968	ENSDARG00000116814	CU570894.2	99	54.348
ENSDARG00000113011	zgc:113102	92	47.419	ENSDARG00000089940	znf1008	85	47.419
ENSDARG00000113011	zgc:113102	95	50.996	ENSDARG00000102401	znf1001	100	53.933
ENSDARG00000113011	zgc:113102	99	43.642	ENSDARG00000104798	BX510922.2	97	43.642
ENSDARG00000113011	zgc:113102	96	66.109	ENSDARG00000104887	znf1105	89	66.109
ENSDARG00000113011	zgc:113102	99	46.586	ENSDARG00000087046	si:ch211-222k6.2	100	46.586
ENSDARG00000113011	zgc:113102	95	59.744	ENSDARG00000102411	CR847850.1	95	57.100
ENSDARG00000113011	zgc:113102	99	66.495	ENSDARG00000098021	si:dkey-111k8.2	99	49.862
ENSDARG00000113011	zgc:113102	100	49.091	ENSDARG00000103954	znf1152	97	49.091
ENSDARG00000113011	zgc:113102	98	46.980	ENSDARG00000097928	si:ch73-40a17.4	92	46.980
ENSDARG00000113011	zgc:113102	99	54.251	ENSDARG00000097521	si:dkey-111k8.5	100	61.493
ENSDARG00000113011	zgc:113102	95	47.324	ENSDARG00000079760	zgc:112998	96	47.324
ENSDARG00000113011	zgc:113102	95	65.455	ENSDARG00000098923	zgc:173577	97	60.396
ENSDARG00000113011	zgc:113102	96	66.109	ENSDARG00000093041	si:ch211-234c11.2	89	52.286
ENSDARG00000113011	zgc:113102	89	72.347	ENSDARG00000077712	zgc:113886	99	72.347
ENSDARG00000113011	zgc:113102	93	63.265	ENSDARG00000091679	FO704858.1	99	63.265
ENSDARG00000113011	zgc:113102	99	69.822	ENSDARG00000089947	BX005085.1	99	70.040
ENSDARG00000113011	zgc:113102	100	60.185	ENSDARG00000053165	zgc:113377	100	51.282
ENSDARG00000113011	zgc:113102	79	69.231	ENSDARG00000100568	si:ch211-209j12.3	100	69.231
ENSDARG00000113011	zgc:113102	93	65.447	ENSDARG00000110710	CU210890.1	97	65.447
ENSDARG00000113011	zgc:113102	99	47.260	ENSDARG00000101093	zgc:162971	98	50.833
ENSDARG00000113011	zgc:113102	86	44.728	ENSDARG00000099618	si:dkey-1b17.6	89	52.703
ENSDARG00000113011	zgc:113102	93	45.652	ENSDARG00000101562	znf1014	89	45.614
ENSDARG00000113011	zgc:113102	95	63.710	ENSDARG00000106565	CABZ01066720.1	96	63.710
ENSDARG00000113011	zgc:113102	97	54.930	ENSDARG00000099917	znf1005	100	54.930
ENSDARG00000113011	zgc:113102	100	47.214	ENSDARG00000071833	znf1162	100	57.955
ENSDARG00000113011	zgc:113102	97	72.626	ENSDARG00000099172	BX000701.1	96	72.626
ENSDARG00000113011	zgc:113102	95	54.035	ENSDARG00000096851	znf1143	100	54.035
ENSDARG00000113011	zgc:113102	99	55.133	ENSDARG00000100587	zgc:113886	100	65.517
ENSDARG00000113011	zgc:113102	79	71.429	ENSDARG00000094484	si:ch211-162i8.4	98	71.429
ENSDARG00000113011	zgc:113102	93	67.401	ENSDARG00000090740	zmp:0000001003	100	67.401
ENSDARG00000113011	zgc:113102	95	65.455	ENSDARG00000103530	zgc:113102	97	65.455
ENSDARG00000113011	zgc:113102	92	61.265	ENSDARG00000101463	si:dkey-176f19.1	99	66.477
ENSDARG00000113011	zgc:113102	85	60.177	ENSDARG00000078814	si:dkey-34m19.3	78	60.177
ENSDARG00000113011	zgc:113102	95	56.863	ENSDARG00000088507	znf982	100	56.863
ENSDARG00000113011	zgc:113102	95	59.672	ENSDARG00000099731	CABZ01066719.1	86	63.582
ENSDARG00000113011	zgc:113102	98	45.631	ENSDARG00000071589	si:dkey-253d23.2	94	40.741
ENSDARG00000113011	zgc:113102	92	49.123	ENSDARG00000099986	si:ch211-207i20.2	63	49.123
ENSDARG00000113011	zgc:113102	92	66.327	ENSDARG00000103777	znf1001	100	66.327
ENSDARG00000113011	zgc:113102	99	63.563	ENSDARG00000111506	BX470259.1	97	63.563
ENSDARG00000113011	zgc:113102	94	46.528	ENSDARG00000104904	si:ch73-221f6.1	61	46.528
ENSDARG00000113011	zgc:113102	87	50.809	ENSDARG00000102282	CABZ01063298.1	88	50.809
ENSDARG00000113011	zgc:113102	95	55.510	ENSDARG00000098248	CABZ01081730.1	99	57.377
ENSDARG00000113011	zgc:113102	97	44.000	ENSDARG00000102959	zgc:171220	99	40.710
ENSDARG00000113011	zgc:113102	88	74.150	ENSDARG00000109749	si:ch211-162i8.7	83	74.658
ENSDARG00000113011	zgc:113102	100	61.682	ENSDARG00000093378	si:ch211-235i11.5	99	51.538
ENSDARG00000113011	zgc:113102	100	51.807	ENSDARG00000104065	znf1154	97	48.626
ENSDARG00000113011	zgc:113102	95	54.651	ENSDARG00000111899	zgc:171435	89	54.651
ENSDARG00000113011	zgc:113102	95	50.292	ENSDARG00000098898	si:ch211-255f4.2	99	50.292
ENSDARG00000113011	zgc:113102	96	47.917	ENSDARG00000100882	znf1154	91	47.720
ENSDARG00000113011	zgc:113102	100	54.412	ENSDARG00000101044	si:ch73-138e16.6	96	57.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000113011	zgc:113102	97	47.568	ENSACIG00000007882	-	76	47.568	Amphilophus_citrinellus
ENSDARG00000113011	zgc:113102	92	44.681	ENSACIG00000008886	znf1164	82	46.207	Amphilophus_citrinellus
ENSDARG00000113011	zgc:113102	99	45.128	ENSACIG00000000360	si:ch211-241b2.1	87	50.000	Amphilophus_citrinellus
ENSDARG00000113011	zgc:113102	99	46.610	ENSATEG00000008667	-	61	46.610	Anabas_testudineus
ENSDARG00000113011	zgc:113102	99	48.256	ENSATEG00000008683	si:ch211-241b2.1	90	44.706	Anabas_testudineus
ENSDARG00000113011	zgc:113102	83	40.157	ENSACLG00000017449	-	58	40.157	Astatotilapia_calliptera
ENSDARG00000113011	zgc:113102	84	52.941	ENSACLG00000024670	-	83	50.575	Astatotilapia_calliptera
ENSDARG00000113011	zgc:113102	92	51.190	ENSAMXG00000041650	-	86	55.294	Astyanax_mexicanus
ENSDARG00000113011	zgc:113102	84	55.204	ENSAMXG00000043291	-	75	55.204	Astyanax_mexicanus
ENSDARG00000113011	zgc:113102	96	40.351	ENSCSEG00000015585	-	82	42.500	Cynoglossus_semilaevis
ENSDARG00000113011	zgc:113102	93	46.111	ENSEBUG00000015073	-	81	45.779	Eptatretus_burgeri
ENSDARG00000113011	zgc:113102	97	48.469	ENSFHEG00000018009	-	55	47.872	Fundulus_heteroclitus
ENSDARG00000113011	zgc:113102	94	54.128	ENSHBUG00000018916	-	64	54.128	Haplochromis_burtoni
ENSDARG00000113011	zgc:113102	97	44.404	ENSKMAG00000009563	-	75	47.244	Kryptolebias_marmoratus
ENSDARG00000113011	zgc:113102	90	42.411	ENSLBEG00000028628	znf1174	52	43.386	Labrus_bergylta
ENSDARG00000113011	zgc:113102	99	53.425	ENSMZEG00005026470	-	53	55.729	Maylandia_zebra
ENSDARG00000113011	zgc:113102	96	40.404	ENSMZEG00005025568	-	79	41.379	Maylandia_zebra
ENSDARG00000113011	zgc:113102	99	54.386	ENSMZEG00005027793	-	77	52.837	Maylandia_zebra
ENSDARG00000113011	zgc:113102	92	54.587	ENSMZEG00005007426	-	68	54.587	Maylandia_zebra
ENSDARG00000113011	zgc:113102	99	52.299	ENSMZEG00005027943	-	97	49.498	Maylandia_zebra
ENSDARG00000113011	zgc:113102	83	50.617	ENSMZEG00005005162	-	80	45.455	Maylandia_zebra
ENSDARG00000113011	zgc:113102	95	41.176	ENSMZEG00005022161	-	93	40.288	Maylandia_zebra
ENSDARG00000113011	zgc:113102	84	39.810	ENSMALG00000008638	-	56	35.494	Monopterus_albus
ENSDARG00000113011	zgc:113102	96	53.049	ENSNBRG00000000577	-	76	51.460	Neolamprologus_brichardi
ENSDARG00000113011	zgc:113102	89	40.179	ENSONIG00000006585	-	100	40.179	Oreochromis_niloticus
ENSDARG00000113011	zgc:113102	93	41.007	ENSONIG00000003363	-	100	40.976	Oreochromis_niloticus
ENSDARG00000113011	zgc:113102	86	49.558	ENSORLG00020019341	-	79	61.111	Oryzias_latipes_hni
ENSDARG00000113011	zgc:113102	96	40.123	ENSPKIG00000020324	-	53	40.123	Paramormyrops_kingsleyae
ENSDARG00000113011	zgc:113102	86	44.361	ENSPMGG00000001558	znf1174	56	44.361	Periophthalmus_magnuspinnatus
ENSDARG00000113011	zgc:113102	97	46.835	ENSPFOG00000001144	-	100	46.835	Poecilia_formosa
ENSDARG00000113011	zgc:113102	87	43.128	ENSPFOG00000011766	-	100	43.128	Poecilia_formosa
ENSDARG00000113011	zgc:113102	99	47.973	ENSPLAG00000016561	zgc:113348	91	45.923	Poecilia_latipinna
ENSDARG00000113011	zgc:113102	99	44.172	ENSPMEG00000007573	zgc:113343	66	44.172	Poecilia_mexicana
ENSDARG00000113011	zgc:113102	94	38.889	ENSPREG00000005538	-	73	38.889	Poecilia_reticulata
ENSDARG00000113011	zgc:113102	93	42.756	ENSPREG00000001514	zgc:113343	67	42.781	Poecilia_reticulata
ENSDARG00000113011	zgc:113102	95	42.241	ENSPNYG00000024183	zgc:173577	99	42.241	Pundamilia_nyererei
ENSDARG00000113011	zgc:113102	99	52.439	ENSSDUG00000008682	-	99	55.556	Seriola_dumerili
ENSDARG00000113011	zgc:113102	87	38.150	ENSSPAG00000009426	-	68	38.150	Stegastes_partitus
ENSDARG00000113011	zgc:113102	93	42.268	ENSSPAG00000006539	-	96	42.268	Stegastes_partitus
ENSDARG00000113011	zgc:113102	88	45.604	ENSTNIG00000000277	-	93	47.514	Tetraodon_nigroviridis
ENSDARG00000113011	zgc:113102	97	43.554	ENSXCOG00000017871	zgc:113343	66	44.144	Xiphophorus_couchianus
ENSDARG00000113011	zgc:113102	97	43.554	ENSXMAG00000019923	zgc:113343	64	44.144	Xiphophorus_maculatus