EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000113666 (Gene tree)
Gene ID: -
Gene Symbol: znf1173
Alias: zgc:174919
Full Name: zinc finger protein 1173
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6277 bases
Position: chr22:2632961-2639237
Accession: ZDB-GENE-080220-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000097056	zf-C2H2	PF00096.26	1.3e-28	1	5
ENSDARP00000097056	zf-C2H2	PF00096.26	1.3e-28	2	5
ENSDARP00000097056	zf-C2H2	PF00096.26	1.3e-28	3	5
ENSDARP00000097056	zf-C2H2	PF00096.26	1.3e-28	4	5
ENSDARP00000097056	zf-C2H2	PF00096.26	1.3e-28	5	5
ENSDARP00000097056	zf-met	PF12874.7	2.4e-05	1	2
ENSDARP00000097056	zf-met	PF12874.7	2.4e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000106278	-	1966	XM_009295886	ENSDARP00000097056	231 (aa)	XP_009294161	F1QQW8

Gene Model

Click here to download ENSDARG00000113666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000113666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000113666	znf1173	81	61.576	ENSDARG00000071833	znf1162	94	61.576
ENSDARG00000113666	znf1173	81	64.516	ENSDARG00000077085	zgc:110821	95	64.516
ENSDARG00000113666	znf1173	82	58.108	ENSDARG00000092246	si:dkey-20i20.3	75	54.696
ENSDARG00000113666	znf1173	76	49.275	ENSDARG00000115326	znf1002	82	52.128
ENSDARG00000113666	znf1173	82	66.667	ENSDARG00000093562	si:dkey-20i20.7	77	66.667
ENSDARG00000113666	znf1173	88	53.333	ENSDARG00000095704	si:dkey-4c15.13	85	63.333
ENSDARG00000113666	znf1173	81	65.217	ENSDARG00000078159	zgc:175284	92	65.217
ENSDARG00000113666	znf1173	80	62.879	ENSDARG00000094309	si:ch73-92e7.6	93	62.879
ENSDARG00000113666	znf1173	81	52.747	ENSDARG00000094736	znf1157	81	69.474
ENSDARG00000113666	znf1173	86	53.368	ENSDARG00000101885	si:dkey-20i20.11	94	53.368
ENSDARG00000113666	znf1173	76	49.206	ENSDARG00000102053	znf1164	82	65.957
ENSDARG00000113666	znf1173	76	50.000	ENSDARG00000071725	znf1167	87	50.000
ENSDARG00000113666	znf1173	82	53.039	ENSDARG00000095455	si:dkey-20i20.10	88	53.039
ENSDARG00000113666	znf1173	80	65.116	ENSDARG00000093875	zgc:174224	67	65.116
ENSDARG00000113666	znf1173	67	55.484	ENSDARG00000094343	si:dkey-20i20.8	70	49.727
ENSDARG00000113666	znf1173	82	53.906	ENSDARG00000100544	zgc:173486	72	62.667
ENSDARG00000113666	znf1173	76	66.000	ENSDARG00000099618	si:dkey-1b17.6	81	68.142
ENSDARG00000113666	znf1173	90	56.354	ENSDARG00000071714	znf983	88	56.354
ENSDARG00000113666	znf1173	81	60.465	ENSDARG00000088507	znf982	87	60.377
ENSDARG00000113666	znf1173	89	49.761	ENSDARG00000014775	zgc:113220	86	50.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000113666	znf1173	67	41.732	ENSORLG00020019341	-	88	57.895	Oryzias_latipes_hni