EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000113837 (Gene tree)
Gene ID: -
Gene Symbol: LO018029.2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 909 bases
Position: chr4:77262694-77263602
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000154754	zf-C2H2	PF00096.26	6.3e-33	1	6
ENSDARP00000154754	zf-C2H2	PF00096.26	6.3e-33	2	6
ENSDARP00000154754	zf-C2H2	PF00096.26	6.3e-33	3	6
ENSDARP00000154754	zf-C2H2	PF00096.26	6.3e-33	4	6
ENSDARP00000154754	zf-C2H2	PF00096.26	6.3e-33	5	6
ENSDARP00000154754	zf-C2H2	PF00096.26	6.3e-33	6	6
ENSDARP00000154754	zf-met	PF12874.7	6.5e-10	1	2
ENSDARP00000154754	zf-met	PF12874.7	6.5e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000185775	LO018029.2-201	801	-	ENSDARP00000154754	266 (aa)	-	A0A2R8QKE5

Gene Model

Click here to download ENSDARG00000113837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000113837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000113837	LO018029.2	90	44.565	ENSDARG00000097215	si:dkey-172k15.3	89	47.253
ENSDARG00000113837	LO018029.2	97	57.769	ENSDARG00000105784	LO018029.1	97	57.769
ENSDARG00000113837	LO018029.2	87	74.892	ENSDARG00000053695	zgc:162948	91	75.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000113837	LO018029.2	93	49.390	ENSGAFG00000011884	-	57	50.000	Gambusia_affinis
ENSDARG00000113837	LO018029.2	82	46.429	ENSOMEG00000016026	-	63	46.429	Oryzias_melastigma