EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000113899 (Gene tree)
Gene ID
334219
Gene Symbol
zgc:77650
Alias
fi36f11|wu:fi36f11
Full Name
zgc:77650
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
12156 bases
Position
chr18:7553950-7566105
Accession
ZDB-GENE-030131-6151
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000062142MMR_HSR1PF01926.234e-0511
ENSDARP00000149649MMR_HSR1PF01926.234e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000062143-1622-ENSDARP00000062142180 (aa)-Q6P5M5
ENSDART00000193420-4573-ENSDARP00000149649180 (aa)-Q6P5M5
Gene Model
Click here to download ENSDARG00000113899's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000113899's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000113899zgc:776509246.108ENSDARG00000069496arl29046.108
ENSDARG00000113899zgc:776508945.783ENSDARG00000063223arl148345.783
ENSDARG00000113899zgc:776506230.508ENSDARG00000055291rab18a5730.508
ENSDARG00000113899zgc:776509538.333ENSDARG00000032056arl69638.547
ENSDARG00000113899zgc:776509233.735ENSDARG00000006915arl8ba8933.735
ENSDARG00000113899zgc:7765010081.667ENSDARG00000070539arf3a9981.667
ENSDARG00000113899zgc:7765010099.444ENSDARG00000070472arf510099.444
ENSDARG00000113899zgc:776508643.871ENSDARG00000015404arl3l29443.182
ENSDARG00000113899zgc:776509333.143ENSDARG00000070318arl8bb9433.143
ENSDARG00000113899zgc:776509243.860ENSDARG00000045074arl4d8643.860
ENSDARG00000113899zgc:7765010083.333ENSDARG00000056582arf2b9983.333
ENSDARG00000113899zgc:776509647.753ENSDARG00000057606arl4ca9347.753
ENSDARG00000113899zgc:776508930.814ENSDARG00000103403sar1b8730.814
ENSDARG00000113899zgc:776509243.636ENSDARG00000071409arl39143.636
ENSDARG00000113899zgc:776509243.030ENSDARG00000056794zgc:1101979143.030
ENSDARG00000113899zgc:776509130.636ENSDARG00000012763arl13b6630.636
ENSDARG00000113899zgc:7765010043.386ENSDARG00000099918arl4aa9543.386
ENSDARG00000113899zgc:7765010042.703ENSDARG00000111106arl3l19942.703
ENSDARG00000113899zgc:776509648.555ENSDARG00000035719arl5c9648.555
ENSDARG00000113899zgc:7765010082.778ENSDARG00000009484arf19982.778
ENSDARG00000113899zgc:776509231.325ENSDARG00000078686arl8a8931.325
ENSDARG00000113899zgc:7765010083.333ENSDARG00000016393arf2b10086.806
ENSDARG00000113899zgc:776509744.505ENSDARG00000033182arl4ab9144.505
ENSDARG00000113899zgc:7765010058.889ENSDARG00000101680arl19860.119
ENSDARG00000113899zgc:776509434.615ENSDARG00000057857arfrp18934.615
ENSDARG00000113899zgc:7765010082.222ENSDARG00000036998arf3b9982.222
ENSDARG00000113899zgc:7765010072.928ENSDARG00000074210ARF58972.928
ENSDARG00000113899zgc:776509741.477ENSDARG00000036637arl119941.477
ENSDARG00000113899zgc:776508931.034ENSDARG00000033320sar1ab8731.034
ENSDARG00000113899zgc:7765010045.556ENSDARG00000018627arl5a10045.556
ENSDARG00000113899zgc:776509646.067ENSDARG00000032708arl4cb9346.067
ENSDARG00000113899zgc:776509885.311ENSDARG00000014763arf2a10087.288
ENSDARG00000113899zgc:7765010045.556ENSDARG00000094709arl810045.556
ENSDARG00000113899zgc:7765010093.333ENSDARG00000045989arf4a10093.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000113899zgc:7765010093.889ENSG00000004059ARF510093.889Homo_sapiens
ENSDARG00000113899zgc:776509989.944ENSAPOG00000000667-9989.944Acanthochromis_polyacanthus
ENSDARG00000113899zgc:7765010093.889ENSAMEG00000004635ARF510093.889Ailuropoda_melanoleuca
ENSDARG00000113899zgc:7765010096.667ENSACIG00000005843arf510096.667Amphilophus_citrinellus
ENSDARG00000113899zgc:7765010071.111ENSACIG00000014610zgc:11028610071.111Amphilophus_citrinellus
ENSDARG00000113899zgc:776509992.179ENSACIG00000000467-9992.179Amphilophus_citrinellus
ENSDARG00000113899zgc:776509988.268ENSAOCG00000008113-9988.268Amphiprion_ocellaris
ENSDARG00000113899zgc:7765010094.444ENSAOCG00000023329arf510094.444Amphiprion_ocellaris
ENSDARG00000113899zgc:776509988.268ENSAPEG00000003087-9988.268Amphiprion_percula
ENSDARG00000113899zgc:7765010094.444ENSAPEG00000024614arf510094.444Amphiprion_percula
ENSDARG00000113899zgc:7765010096.111ENSATEG00000003053ARF510096.111Anabas_testudineus
ENSDARG00000113899zgc:776509991.061ENSATEG00000001302-9991.061Anabas_testudineus
ENSDARG00000113899zgc:7765010093.889ENSANAG00000026446ARF510093.889Aotus_nancymaae
ENSDARG00000113899zgc:7765010097.222ENSACLG00000005705arf510097.222Astatotilapia_calliptera
ENSDARG00000113899zgc:776509991.620ENSACLG00000025604-9991.620Astatotilapia_calliptera
ENSDARG00000113899zgc:7765010098.889ENSAMXG00000038224-10098.889Astyanax_mexicanus
ENSDARG00000113899zgc:7765010093.333ENSAMXG00000031467arf4a10093.333Astyanax_mexicanus
ENSDARG00000113899zgc:7765010096.667ENSAMXG00000031774ARF510096.667Astyanax_mexicanus
ENSDARG00000113899zgc:7765010098.889ENSAMXG00000004249-10098.889Astyanax_mexicanus
ENSDARG00000113899zgc:7765010093.889ENSBTAG00000009366ARF510093.889Bos_taurus
ENSDARG00000113899zgc:776509988.827WBGene00000183arf-39988.827Caenorhabditis_elegans
ENSDARG00000113899zgc:7765010093.889ENSCJAG00000017604ARF510093.889Callithrix_jacchus
ENSDARG00000113899zgc:7765010078.972ENSCAFG00020021629ARF510078.972Canis_lupus_dingo
ENSDARG00000113899zgc:7765010093.889ENSCHIG00000018906ARF510093.889Capra_hircus
ENSDARG00000113899zgc:7765010091.160ENSCPOG00000006239ARF510091.160Cavia_porcellus
ENSDARG00000113899zgc:7765010093.889ENSCCAG00000027943-10093.889Cebus_capucinus
ENSDARG00000113899zgc:7765010093.889ENSCATG00000010217ARF510093.889Cercocebus_atys
ENSDARG00000113899zgc:7765010093.889ENSCLAG00000007930ARF510093.889Chinchilla_lanigera
ENSDARG00000113899zgc:7765010093.889ENSCSAG00000010208ARF510093.889Chlorocebus_sabaeus
ENSDARG00000113899zgc:776509979.330ENSCING00000004846-9979.330Ciona_intestinalis
ENSDARG00000113899zgc:776509976.796ENSCSAVG00000001959-9976.796Ciona_savignyi
ENSDARG00000113899zgc:776508993.168ENSCANG00000037234ARF59893.168Colobus_angolensis_palliatus
ENSDARG00000113899zgc:7765010093.889ENSCGRG00001024919Arf510093.889Cricetulus_griseus_chok1gshd
ENSDARG00000113899zgc:7765010089.444ENSCSEG00000006004arf510089.444Cynoglossus_semilaevis
ENSDARG00000113899zgc:7765010097.222ENSCVAG00000007314-10097.222Cyprinodon_variegatus
ENSDARG00000113899zgc:7765010097.222ENSCVAG00000009124ARF510097.222Cyprinodon_variegatus
ENSDARG00000113899zgc:776509991.620ENSCVAG00000011381-9991.620Cyprinodon_variegatus
ENSDARG00000113899zgc:7765010093.889ENSDORG00000000325Arf510093.889Dipodomys_ordii
ENSDARG00000113899zgc:7765010086.111FBgn0013749Arf102F10086.111Drosophila_melanogaster
ENSDARG00000113899zgc:776509790.857ENSETEG00000009275ARF510090.857Echinops_telfairi
ENSDARG00000113899zgc:7765010086.111ENSEBUG00000014420-10086.111Eptatretus_burgeri
ENSDARG00000113899zgc:776509969.832ENSEBUG00000004484-9969.832Eptatretus_burgeri
ENSDARG00000113899zgc:776509975.978ENSELUG00000014428arf49975.978Esox_lucius
ENSDARG00000113899zgc:7765010093.889ENSFCAG00000005482ARF510093.889Felis_catus
ENSDARG00000113899zgc:7765010096.667ENSFHEG00000023119arf510096.667Fundulus_heteroclitus
ENSDARG00000113899zgc:7765010090.556ENSGMOG00000008747arf510090.556Gadus_morhua
ENSDARG00000113899zgc:7765010092.778ENSGMOG00000019109-9992.778Gadus_morhua
ENSDARG00000113899zgc:7765010097.222ENSGAFG00000018703arf510097.222Gambusia_affinis
ENSDARG00000113899zgc:776509990.503ENSGAFG00000005163-9990.503Gambusia_affinis
ENSDARG00000113899zgc:776509988.268ENSGACG00000012500-9988.268Gasterosteus_aculeatus
ENSDARG00000113899zgc:7765010095.000ENSGACG00000000686arf510095.000Gasterosteus_aculeatus
ENSDARG00000113899zgc:7765010093.889ENSGAGG00000000231ARF510093.889Gopherus_agassizii
ENSDARG00000113899zgc:7765010093.889ENSGGOG00000016749ARF510093.889Gorilla_gorilla
ENSDARG00000113899zgc:7765010097.222ENSHBUG00000008546arf510097.222Haplochromis_burtoni
ENSDARG00000113899zgc:776509991.620ENSHBUG00000011041-9991.620Haplochromis_burtoni
ENSDARG00000113899zgc:7765010093.889ENSHGLG00000007494ARF510093.889Heterocephalus_glaber_female
ENSDARG00000113899zgc:7765010092.778ENSHGLG00100006040ARF56092.778Heterocephalus_glaber_male
ENSDARG00000113899zgc:776509986.592ENSHCOG00000015577-10086.592Hippocampus_comes
ENSDARG00000113899zgc:7765010072.222ENSIPUG00000006913-7072.222Ictalurus_punctatus
ENSDARG00000113899zgc:7765010097.778ENSIPUG00000004159Arf510097.778Ictalurus_punctatus
ENSDARG00000113899zgc:7765010096.667ENSIPUG00000004215arf510096.667Ictalurus_punctatus
ENSDARG00000113899zgc:7765010095.000ENSIPUG00000007016arf410095.000Ictalurus_punctatus
ENSDARG00000113899zgc:7765010093.889ENSSTOG00000002104ARF510093.889Ictidomys_tridecemlineatus
ENSDARG00000113899zgc:7765010093.889ENSJJAG00000005105Arf510093.889Jaculus_jaculus
ENSDARG00000113899zgc:776509992.179ENSKMAG00000012816-9992.179Kryptolebias_marmoratus
ENSDARG00000113899zgc:7765010093.889ENSLBEG00000026532arf510093.889Labrus_bergylta
ENSDARG00000113899zgc:7765010086.667ENSLBEG00000012002-9986.667Labrus_bergylta
ENSDARG00000113899zgc:7765010093.889ENSLAFG00000011469ARF510093.889Loxodonta_africana
ENSDARG00000113899zgc:7765010093.889ENSMFAG00000019772ARF510093.889Macaca_fascicularis
ENSDARG00000113899zgc:7765010093.889ENSMMUG00000046381ARF510093.889Macaca_mulatta
ENSDARG00000113899zgc:7765010093.889ENSMNEG00000040893ARF510093.889Macaca_nemestrina
ENSDARG00000113899zgc:776509991.620ENSMAMG00000008223-9991.620Mastacembelus_armatus
ENSDARG00000113899zgc:7765010095.556ENSMAMG00000021160arf510095.556Mastacembelus_armatus
ENSDARG00000113899zgc:776508791.720ENSMZEG00005019741-9391.720Maylandia_zebra
ENSDARG00000113899zgc:7765010097.222ENSMZEG00005015033arf56797.222Maylandia_zebra
ENSDARG00000113899zgc:7765010093.889ENSMAUG00000014825Arf510093.889Mesocricetus_auratus
ENSDARG00000113899zgc:7765010093.889ENSMICG00000000091ARF510093.889Microcebus_murinus
ENSDARG00000113899zgc:7765010093.889ENSMOCG00000022861Arf510093.889Microtus_ochrogaster
ENSDARG00000113899zgc:7765010093.333ENSMODG00000015229ARF510093.333Monodelphis_domestica
ENSDARG00000113899zgc:776509970.391ENSMALG00000022638zgc:11028610070.391Monopterus_albus
ENSDARG00000113899zgc:776509992.179ENSMALG00000006020-9992.179Monopterus_albus
ENSDARG00000113899zgc:7765010096.111ENSMALG00000010117-10096.111Monopterus_albus
ENSDARG00000113899zgc:7765010093.889MGP_CAROLIEiJ_G0028156Arf510093.889Mus_caroli
ENSDARG00000113899zgc:7765010093.889ENSMUSG00000020440Arf510093.889Mus_musculus
ENSDARG00000113899zgc:7765010093.889MGP_PahariEiJ_G0021914Arf510093.889Mus_pahari
ENSDARG00000113899zgc:7765010093.889MGP_SPRETEiJ_G0029156Arf510093.889Mus_spretus
ENSDARG00000113899zgc:7765010093.889ENSMPUG00000006675ARF510093.889Mustela_putorius_furo
ENSDARG00000113899zgc:7765010093.889ENSMLUG00000017122ARF510093.889Myotis_lucifugus
ENSDARG00000113899zgc:7765010093.889ENSNGAG00000011743Arf510093.889Nannospalax_galili
ENSDARG00000113899zgc:7765010097.222ENSNBRG00000018854arf510097.222Neolamprologus_brichardi
ENSDARG00000113899zgc:7765010093.889ENSODEG00000011800ARF510093.889Octodon_degus
ENSDARG00000113899zgc:776509991.620ENSONIG00000014890-9991.620Oreochromis_niloticus
ENSDARG00000113899zgc:7765010097.222ENSONIG00000007594arf510097.222Oreochromis_niloticus
ENSDARG00000113899zgc:7765010093.889ENSOCUG00000024365ARF510093.889Oryctolagus_cuniculus
ENSDARG00000113899zgc:776509991.061ENSORLG00020001755-9991.061Oryzias_latipes_hni
ENSDARG00000113899zgc:7765010096.667ENSOMEG00000020821ARF510096.667Oryzias_melastigma
ENSDARG00000113899zgc:776509991.620ENSOMEG00000000211-6491.620Oryzias_melastigma
ENSDARG00000113899zgc:7765010093.889ENSOGAG00000013336ARF510093.889Otolemur_garnettii
ENSDARG00000113899zgc:7765010093.889ENSPPAG00000037755ARF510093.889Pan_paniscus
ENSDARG00000113899zgc:7765010093.889ENSPPRG00000004674ARF510093.889Panthera_pardus
ENSDARG00000113899zgc:7765010093.889ENSPTRG00000019651ARF510093.889Pan_troglodytes
ENSDARG00000113899zgc:7765010093.889ENSPANG00000032970ARF510093.889Papio_anubis
ENSDARG00000113899zgc:7765010095.556ENSPKIG00000013814-10095.556Paramormyrops_kingsleyae
ENSDARG00000113899zgc:7765010093.333ENSPKIG00000025349arf4a10093.333Paramormyrops_kingsleyae
ENSDARG00000113899zgc:7765010096.111ENSPKIG00000025381-10096.111Paramormyrops_kingsleyae
ENSDARG00000113899zgc:7765010089.444ENSPMGG00000009985-10089.444Periophthalmus_magnuspinnatus
ENSDARG00000113899zgc:7765010093.889ENSPEMG00000021476Arf510093.889Peromyscus_maniculatus_bairdii
ENSDARG00000113899zgc:776509981.564ENSPMAG00000009600arf4a10081.564Petromyzon_marinus
ENSDARG00000113899zgc:7765010097.222ENSPFOG00000015817arf510097.222Poecilia_formosa
ENSDARG00000113899zgc:776509990.000ENSPFOG00000017992-9990.000Poecilia_formosa
ENSDARG00000113899zgc:776509990.503ENSPLAG00000015630-9990.503Poecilia_latipinna
ENSDARG00000113899zgc:7765010097.222ENSPLAG00000006742arf510097.222Poecilia_latipinna
ENSDARG00000113899zgc:7765010097.222ENSPMEG00000009605arf510097.222Poecilia_mexicana
ENSDARG00000113899zgc:776509990.503ENSPMEG00000004624-9990.503Poecilia_mexicana
ENSDARG00000113899zgc:7765010093.889ENSPCOG00000027640ARF510093.889Propithecus_coquereli
ENSDARG00000113899zgc:7765010093.889ENSPVAG00000013940ARF510093.889Pteropus_vampyrus
ENSDARG00000113899zgc:7765010097.222ENSPNYG00000001663arf510097.222Pundamilia_nyererei
ENSDARG00000113899zgc:776509991.620ENSPNYG00000004931-9991.620Pundamilia_nyererei
ENSDARG00000113899zgc:7765010072.222ENSPNAG00000004475-10072.222Pygocentrus_nattereri
ENSDARG00000113899zgc:7765010098.889ENSPNAG00000024427-10098.889Pygocentrus_nattereri
ENSDARG00000113899zgc:7765010075.000ENSPNAG00000005054-10075.000Pygocentrus_nattereri
ENSDARG00000113899zgc:7765010093.333ENSPNAG00000004745arf4a10093.333Pygocentrus_nattereri
ENSDARG00000113899zgc:7765010093.889ENSRNOG00000007806Arf510093.889Rattus_norvegicus
ENSDARG00000113899zgc:7765010093.889ENSRBIG00000039868ARF510093.889Rhinopithecus_bieti
ENSDARG00000113899zgc:7765010093.889ENSRROG00000041157ARF510093.889Rhinopithecus_roxellana
ENSDARG00000113899zgc:7765010093.889ENSSBOG00000021669ARF510093.889Saimiri_boliviensis_boliviensis
ENSDARG00000113899zgc:7765010093.889ENSSHAG00000015053ARF510093.889Sarcophilus_harrisii
ENSDARG00000113899zgc:7765010083.333ENSSFOG00015007701-10083.333Scleropages_formosus
ENSDARG00000113899zgc:7765010096.667ENSSFOG00015020707ARF510096.667Scleropages_formosus
ENSDARG00000113899zgc:776509987.709ENSSMAG00000004541-9987.709Scophthalmus_maximus
ENSDARG00000113899zgc:7765010095.000ENSSMAG00000011361arf510095.000Scophthalmus_maximus
ENSDARG00000113899zgc:7765010096.111ENSSDUG00000005105arf510096.111Seriola_dumerili
ENSDARG00000113899zgc:7765010096.111ENSSLDG00000017188arf510096.111Seriola_lalandi_dorsalis
ENSDARG00000113899zgc:7765010095.000ENSSPAG00000014434arf510095.000Stegastes_partitus
ENSDARG00000113899zgc:776509991.620ENSSPAG00000022680-9991.620Stegastes_partitus
ENSDARG00000113899zgc:7765010093.889ENSSSCG00000016593ARF510093.889Sus_scrofa
ENSDARG00000113899zgc:776509984.916ENSTRUG00000025462-10084.916Takifugu_rubripes
ENSDARG00000113899zgc:776509986.034ENSTNIG00000017954-10086.034Tetraodon_nigroviridis
ENSDARG00000113899zgc:776509994.972ENSTNIG00000003348arf510094.972Tetraodon_nigroviridis
ENSDARG00000113899zgc:776509094.444ENSTTRG00000006043ARF510094.444Tursiops_truncatus
ENSDARG00000113899zgc:7765010093.889ENSUAMG00000012982ARF510093.889Ursus_americanus
ENSDARG00000113899zgc:7765010093.889ENSVVUG00000007062ARF510093.889Vulpes_vulpes
ENSDARG00000113899zgc:776509990.503ENSXCOG00000020384-9990.503Xiphophorus_couchianus
ENSDARG00000113899zgc:776509990.503ENSXMAG00000004558-9990.503Xiphophorus_maculatus
ENSDARG00000113899zgc:7765010097.222ENSXMAG00000015306arf510097.222Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0005525GTP binding21873635.IBAFunction
GO:0005525GTP binding-IEAFunction
GO:0005737cytoplasm21873635.IBAComponent
GO:0005794Golgi apparatus21873635.IBAComponent
GO:0005886plasma membrane21873635.IBAComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0006890retrograde vesicle-mediated transport, Golgi to ER21873635.IBAProcess
GO:0006893Golgi to plasma membrane transport21873635.IBAProcess
GO:0016192vesicle-mediated transport21873635.IBAProcess

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