EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000113969 (Gene tree)
Gene ID: 436782
Gene Symbol: supt4h1
Alias: zgc:92824
Full Name: SPT4 homolog%2C DSIF elongation factor subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 10453 bases
Position: chr5:3118231-3128683
Accession: ZDB-GENE-040718-214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000147232	Spt4	PF06093.13	7.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000179809	-	2288	-	ENSDARP00000147232	117 (aa)	-	Q6DGQ0

Gene Model

Click here to download ENSDARG00000113969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000113969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000113969	supt4h1	100	88.034	ENSG00000213246	SUPT4H1	100	88.034	Homo_sapiens
ENSDARG00000113969	supt4h1	80	95.745	ENSAPOG00000006828	supt4h1	100	95.745	Acanthochromis_polyacanthus
ENSDARG00000113969	supt4h1	100	87.179	ENSAMEG00000011686	SUPT4H1	100	87.179	Ailuropoda_melanoleuca
ENSDARG00000113969	supt4h1	80	96.809	ENSACIG00000012162	supt4h1	100	96.809	Amphilophus_citrinellus
ENSDARG00000113969	supt4h1	100	95.726	ENSAOCG00000022349	supt4h1	100	95.726	Amphiprion_ocellaris
ENSDARG00000113969	supt4h1	100	95.726	ENSAPEG00000013170	supt4h1	100	95.726	Amphiprion_percula
ENSDARG00000113969	supt4h1	100	96.581	ENSATEG00000005317	supt4h1	100	96.581	Anabas_testudineus
ENSDARG00000113969	supt4h1	100	74.576	ENSAPLG00000012497	SUPT4H1	100	74.576	Anas_platyrhynchos
ENSDARG00000113969	supt4h1	100	88.889	ENSANAG00000026628	SUPT4H1	100	88.889	Aotus_nancymaae
ENSDARG00000113969	supt4h1	100	97.436	ENSACLG00000005475	supt4h1	100	97.436	Astatotilapia_calliptera
ENSDARG00000113969	supt4h1	100	98.291	ENSAMXG00000041272	supt4h1	100	98.291	Astyanax_mexicanus
ENSDARG00000113969	supt4h1	90	55.238	WBGene00005014	spt-4	88	55.238	Caenorhabditis_elegans
ENSDARG00000113969	supt4h1	100	88.034	ENSCJAG00000017369	SUPT4H1	100	88.034	Callithrix_jacchus
ENSDARG00000113969	supt4h1	100	88.034	ENSCAFG00000017524	SUPT4H1	100	88.034	Canis_familiaris
ENSDARG00000113969	supt4h1	100	88.034	ENSCAFG00020025803	SUPT4H1	78	88.034	Canis_lupus_dingo
ENSDARG00000113969	supt4h1	100	88.034	ENSCHIG00000026783	SUPT4H1	100	88.034	Capra_hircus
ENSDARG00000113969	supt4h1	100	88.034	ENSTSYG00000030004	SUPT4H1	100	88.034	Carlito_syrichta
ENSDARG00000113969	supt4h1	100	88.034	ENSCPOG00000031227	SUPT4H1	100	88.034	Cavia_porcellus
ENSDARG00000113969	supt4h1	100	88.034	ENSCCAG00000034799	SUPT4H1	100	88.034	Cebus_capucinus
ENSDARG00000113969	supt4h1	100	64.957	ENSCATG00000024314	-	100	64.957	Cercocebus_atys
ENSDARG00000113969	supt4h1	100	88.034	ENSCATG00000042435	SUPT4H1	100	88.034	Cercocebus_atys
ENSDARG00000113969	supt4h1	100	88.034	ENSCLAG00000011223	SUPT4H1	100	88.034	Chinchilla_lanigera
ENSDARG00000113969	supt4h1	100	88.034	ENSCSAG00000005761	SUPT4H1	100	88.034	Chlorocebus_sabaeus
ENSDARG00000113969	supt4h1	100	75.214	ENSCHOG00000000246	SUPT4H1	100	75.214	Choloepus_hoffmanni
ENSDARG00000113969	supt4h1	50	93.220	ENSCPBG00000015876	SUPT4H1	100	93.220	Chrysemys_picta_bellii
ENSDARG00000113969	supt4h1	99	70.690	ENSCING00000019520	spt4	95	70.690	Ciona_intestinalis
ENSDARG00000113969	supt4h1	99	70.690	ENSCSAVG00000009479	-	95	70.690	Ciona_savignyi
ENSDARG00000113969	supt4h1	100	88.034	ENSCANG00000034430	SUPT4H1	100	88.034	Colobus_angolensis_palliatus
ENSDARG00000113969	supt4h1	100	88.889	ENSCGRG00001018056	Supt4a	100	88.889	Cricetulus_griseus_chok1gshd
ENSDARG00000113969	supt4h1	100	88.889	ENSCGRG00000014047	Supt4a	100	88.889	Cricetulus_griseus_crigri
ENSDARG00000113969	supt4h1	100	95.726	ENSCSEG00000010897	supt4h1	100	95.726	Cynoglossus_semilaevis
ENSDARG00000113969	supt4h1	100	95.726	ENSCVAG00000014190	supt4h1	100	95.726	Cyprinodon_variegatus
ENSDARG00000113969	supt4h1	100	88.034	ENSDNOG00000032349	SUPT4H1	100	88.034	Dasypus_novemcinctus
ENSDARG00000113969	supt4h1	94	76.522	ENSDORG00000030049	-	100	77.391	Dipodomys_ordii
ENSDARG00000113969	supt4h1	100	88.034	ENSDORG00000002826	-	100	88.034	Dipodomys_ordii
ENSDARG00000113969	supt4h1	96	58.036	FBgn0028683	spt4	97	58.036	Drosophila_melanogaster
ENSDARG00000113969	supt4h1	65	77.632	ENSEBUG00000006884	supt4h1	100	77.632	Eptatretus_burgeri
ENSDARG00000113969	supt4h1	100	88.034	ENSEASG00005002787	SUPT4H1	80	88.034	Equus_asinus_asinus
ENSDARG00000113969	supt4h1	100	88.034	ENSECAG00000016585	SUPT4H1	100	88.034	Equus_caballus
ENSDARG00000113969	supt4h1	100	95.726	ENSELUG00000019831	supt4h1	100	95.726	Esox_lucius
ENSDARG00000113969	supt4h1	100	88.034	ENSFCAG00000018732	SUPT4H1	100	88.034	Felis_catus
ENSDARG00000113969	supt4h1	80	86.170	ENSFALG00000013757	SUPT4H1	100	86.170	Ficedula_albicollis
ENSDARG00000113969	supt4h1	100	88.034	ENSFDAG00000016718	SUPT4H1	100	88.034	Fukomys_damarensis
ENSDARG00000113969	supt4h1	100	97.436	ENSFHEG00000009114	supt4h1	100	97.436	Fundulus_heteroclitus
ENSDARG00000113969	supt4h1	100	94.872	ENSGMOG00000014619	supt4h1	100	94.872	Gadus_morhua
ENSDARG00000113969	supt4h1	100	87.179	ENSGALG00000000944	SUPT4H1	100	87.179	Gallus_gallus
ENSDARG00000113969	supt4h1	100	94.872	ENSGAFG00000014374	supt4h1	100	94.872	Gambusia_affinis
ENSDARG00000113969	supt4h1	100	94.872	ENSGACG00000020237	supt4h1	100	94.872	Gasterosteus_aculeatus
ENSDARG00000113969	supt4h1	57	85.075	ENSGAGG00000008561	SUPT4H1	57	85.075	Gopherus_agassizii
ENSDARG00000113969	supt4h1	100	88.034	ENSGGOG00000007232	SUPT4H1	100	88.034	Gorilla_gorilla
ENSDARG00000113969	supt4h1	90	95.238	ENSHBUG00000000848	-	89	95.238	Haplochromis_burtoni
ENSDARG00000113969	supt4h1	80	97.872	ENSHBUG00000022528	supt4h1	100	97.872	Haplochromis_burtoni
ENSDARG00000113969	supt4h1	100	88.889	ENSHGLG00000005007	SUPT4H1	100	88.889	Heterocephalus_glaber_female
ENSDARG00000113969	supt4h1	100	88.889	ENSHGLG00100018961	SUPT4H1	100	88.889	Heterocephalus_glaber_male
ENSDARG00000113969	supt4h1	100	94.017	ENSHCOG00000010739	supt4h1	100	94.017	Hippocampus_comes
ENSDARG00000113969	supt4h1	100	99.145	ENSIPUG00000012062	supt4h1	100	99.145	Ictalurus_punctatus
ENSDARG00000113969	supt4h1	100	69.167	ENSSTOG00000032338	SUPT4H1	100	69.167	Ictidomys_tridecemlineatus
ENSDARG00000113969	supt4h1	100	88.034	ENSJJAG00000010938	Supt4a	100	88.034	Jaculus_jaculus
ENSDARG00000113969	supt4h1	100	94.017	ENSKMAG00000013119	supt4h1	100	94.017	Kryptolebias_marmoratus
ENSDARG00000113969	supt4h1	100	95.726	ENSLBEG00000018308	supt4h1	100	95.726	Labrus_bergylta
ENSDARG00000113969	supt4h1	100	86.325	ENSLACG00000016364	SUPT4H1	100	86.325	Latimeria_chalumnae
ENSDARG00000113969	supt4h1	100	94.872	ENSLOCG00000002970	supt4h1	100	94.872	Lepisosteus_oculatus
ENSDARG00000113969	supt4h1	100	88.034	ENSLAFG00000020718	SUPT4H1	100	88.034	Loxodonta_africana
ENSDARG00000113969	supt4h1	100	88.034	ENSMFAG00000003856	SUPT4H1	100	88.034	Macaca_fascicularis
ENSDARG00000113969	supt4h1	100	64.957	ENSMFAG00000045087	-	100	64.957	Macaca_fascicularis
ENSDARG00000113969	supt4h1	100	64.957	ENSMMUG00000049176	-	100	64.957	Macaca_mulatta
ENSDARG00000113969	supt4h1	100	88.034	ENSMMUG00000040655	SUPT4H1	100	88.034	Macaca_mulatta
ENSDARG00000113969	supt4h1	100	62.393	ENSMNEG00000032891	-	100	62.393	Macaca_nemestrina
ENSDARG00000113969	supt4h1	100	64.103	ENSMNEG00000034957	-	100	64.103	Macaca_nemestrina
ENSDARG00000113969	supt4h1	100	88.034	ENSMNEG00000037471	SUPT4H1	100	88.034	Macaca_nemestrina
ENSDARG00000113969	supt4h1	100	62.393	ENSMLEG00000031477	-	100	62.393	Mandrillus_leucophaeus
ENSDARG00000113969	supt4h1	100	88.034	ENSMLEG00000013750	SUPT4H1	100	88.034	Mandrillus_leucophaeus
ENSDARG00000113969	supt4h1	100	65.812	ENSMLEG00000040145	-	100	65.812	Mandrillus_leucophaeus
ENSDARG00000113969	supt4h1	100	96.581	ENSMAMG00000006148	supt4h1	100	96.581	Mastacembelus_armatus
ENSDARG00000113969	supt4h1	100	97.436	ENSMZEG00005023783	supt4h1	100	97.436	Maylandia_zebra
ENSDARG00000113969	supt4h1	100	88.889	ENSMAUG00000013090	Supt4a	100	88.889	Mesocricetus_auratus
ENSDARG00000113969	supt4h1	100	88.034	ENSMICG00000043219	SUPT4H1	100	88.034	Microcebus_murinus
ENSDARG00000113969	supt4h1	100	88.889	ENSMOCG00000005545	Supt4a	100	88.889	Microtus_ochrogaster
ENSDARG00000113969	supt4h1	80	95.745	ENSMMOG00000005411	supt4h1	100	95.745	Mola_mola
ENSDARG00000113969	supt4h1	100	88.889	ENSMODG00000024938	-	100	88.889	Monodelphis_domestica
ENSDARG00000113969	supt4h1	100	76.068	ENSMODG00000024427	-	100	76.068	Monodelphis_domestica
ENSDARG00000113969	supt4h1	100	97.436	ENSMALG00000013156	supt4h1	100	97.436	Monopterus_albus
ENSDARG00000113969	supt4h1	100	88.034	ENSMUSG00000020485	Supt4a	100	88.034	Mus_musculus
ENSDARG00000113969	supt4h1	100	88.034	ENSMPUG00000015326	SUPT4H1	98	88.034	Mustela_putorius_furo
ENSDARG00000113969	supt4h1	100	84.615	ENSMLUG00000024867	-	100	84.615	Myotis_lucifugus
ENSDARG00000113969	supt4h1	100	88.034	ENSMLUG00000025583	-	100	88.034	Myotis_lucifugus
ENSDARG00000113969	supt4h1	100	81.197	ENSMLUG00000028057	-	100	81.197	Myotis_lucifugus
ENSDARG00000113969	supt4h1	100	82.906	ENSMLUG00000027172	-	100	82.906	Myotis_lucifugus
ENSDARG00000113969	supt4h1	100	88.034	ENSNGAG00000015537	-	100	88.034	Nannospalax_galili
ENSDARG00000113969	supt4h1	64	66.667	ENSNGAG00000014401	-	99	66.667	Nannospalax_galili
ENSDARG00000113969	supt4h1	100	97.436	ENSNBRG00000016146	supt4h1	100	97.436	Neolamprologus_brichardi
ENSDARG00000113969	supt4h1	98	60.870	ENSNLEG00000028366	-	81	60.870	Nomascus_leucogenys
ENSDARG00000113969	supt4h1	92	75.000	ENSNLEG00000033851	-	98	75.000	Nomascus_leucogenys
ENSDARG00000113969	supt4h1	100	88.034	ENSNLEG00000008159	-	100	88.034	Nomascus_leucogenys
ENSDARG00000113969	supt4h1	100	88.034	ENSMEUG00000010164	SUPT4H1	100	88.034	Notamacropus_eugenii
ENSDARG00000113969	supt4h1	100	59.829	ENSOPRG00000018779	-	100	59.829	Ochotona_princeps
ENSDARG00000113969	supt4h1	100	88.034	ENSODEG00000011183	SUPT4H1	100	88.034	Octodon_degus
ENSDARG00000113969	supt4h1	100	88.034	ENSOCUG00000025823	SUPT4H1	100	88.034	Oryctolagus_cuniculus
ENSDARG00000113969	supt4h1	100	94.872	ENSORLG00000011097	supt4h1	100	94.872	Oryzias_latipes
ENSDARG00000113969	supt4h1	100	94.872	ENSORLG00020018918	supt4h1	100	94.872	Oryzias_latipes_hni
ENSDARG00000113969	supt4h1	100	94.872	ENSORLG00015001908	supt4h1	100	94.872	Oryzias_latipes_hsok
ENSDARG00000113969	supt4h1	100	95.726	ENSOMEG00000009103	supt4h1	100	95.726	Oryzias_melastigma
ENSDARG00000113969	supt4h1	100	88.034	ENSOGAG00000031972	SUPT4H1	100	88.034	Otolemur_garnettii
ENSDARG00000113969	supt4h1	100	88.034	ENSOARG00000010021	SUPT4H1	100	88.034	Ovis_aries
ENSDARG00000113969	supt4h1	100	88.034	ENSPPRG00000010997	SUPT4H1	100	88.034	Panthera_pardus
ENSDARG00000113969	supt4h1	100	88.034	ENSPTIG00000006503	SUPT4H1	100	88.034	Panthera_tigris_altaica
ENSDARG00000113969	supt4h1	100	88.034	ENSPTRG00000009451	SUPT4H1	100	88.034	Pan_troglodytes
ENSDARG00000113969	supt4h1	100	63.248	ENSPANG00000031534	-	100	63.248	Papio_anubis
ENSDARG00000113969	supt4h1	100	88.034	ENSPANG00000022280	SUPT4H1	100	88.034	Papio_anubis
ENSDARG00000113969	supt4h1	100	84.615	ENSPKIG00000017008	supt4h1	100	84.615	Paramormyrops_kingsleyae
ENSDARG00000113969	supt4h1	84	83.673	ENSPSIG00000008272	SUPT4H1	100	83.673	Pelodiscus_sinensis
ENSDARG00000113969	supt4h1	83	94.845	ENSPMGG00000013558	supt4h1	100	94.845	Periophthalmus_magnuspinnatus
ENSDARG00000113969	supt4h1	100	88.889	ENSPEMG00000001651	Supt4a	100	88.889	Peromyscus_maniculatus_bairdii
ENSDARG00000113969	supt4h1	100	88.034	ENSPCIG00000015610	-	100	88.034	Phascolarctos_cinereus
ENSDARG00000113969	supt4h1	78	75.824	ENSPCIG00000007509	-	80	75.824	Phascolarctos_cinereus
ENSDARG00000113969	supt4h1	100	94.872	ENSPFOG00000018406	supt4h1	100	94.872	Poecilia_formosa
ENSDARG00000113969	supt4h1	100	94.872	ENSPLAG00000012498	supt4h1	100	94.872	Poecilia_latipinna
ENSDARG00000113969	supt4h1	100	94.872	ENSPMEG00000011887	supt4h1	100	94.872	Poecilia_mexicana
ENSDARG00000113969	supt4h1	82	95.833	ENSPREG00000008031	supt4h1	75	93.684	Poecilia_reticulata
ENSDARG00000113969	supt4h1	100	88.034	ENSPPYG00000008233	SUPT4H1	100	88.034	Pongo_abelii
ENSDARG00000113969	supt4h1	50	82.759	ENSPCAG00000011213	-	100	82.759	Procavia_capensis
ENSDARG00000113969	supt4h1	100	88.034	ENSPCOG00000016589	SUPT4H1	100	88.034	Propithecus_coquereli
ENSDARG00000113969	supt4h1	100	88.034	ENSPVAG00000002320	SUPT4H1	100	88.034	Pteropus_vampyrus
ENSDARG00000113969	supt4h1	100	97.436	ENSPNYG00000016837	supt4h1	100	97.436	Pundamilia_nyererei
ENSDARG00000113969	supt4h1	80	98.936	ENSPNAG00000009422	supt4h1	100	98.936	Pygocentrus_nattereri
ENSDARG00000113969	supt4h1	100	88.034	ENSRNOG00000007845	Supt4h1	100	88.034	Rattus_norvegicus
ENSDARG00000113969	supt4h1	100	88.034	ENSRBIG00000043489	SUPT4H1	100	88.034	Rhinopithecus_bieti
ENSDARG00000113969	supt4h1	100	88.034	ENSRROG00000045659	SUPT4H1	100	88.034	Rhinopithecus_roxellana
ENSDARG00000113969	supt4h1	85	44.444	YGR063C	-	91	44.444	Saccharomyces_cerevisiae
ENSDARG00000113969	supt4h1	100	88.034	ENSSBOG00000031578	SUPT4H1	100	88.034	Saimiri_boliviensis_boliviensis
ENSDARG00000113969	supt4h1	65	96.053	ENSSFOG00015001230	supt4h1	100	96.053	Scleropages_formosus
ENSDARG00000113969	supt4h1	100	97.436	ENSSMAG00000000422	supt4h1	100	97.436	Scophthalmus_maximus
ENSDARG00000113969	supt4h1	100	97.436	ENSSDUG00000017639	supt4h1	100	97.436	Seriola_dumerili
ENSDARG00000113969	supt4h1	100	97.436	ENSSLDG00000019831	supt4h1	100	97.436	Seriola_lalandi_dorsalis
ENSDARG00000113969	supt4h1	100	87.179	ENSSPUG00000001513	SUPT4H1	100	87.179	Sphenodon_punctatus
ENSDARG00000113969	supt4h1	100	97.436	ENSSPAG00000017849	supt4h1	100	97.436	Stegastes_partitus
ENSDARG00000113969	supt4h1	100	88.034	ENSSSCG00000034752	SUPT4H1	100	88.034	Sus_scrofa
ENSDARG00000113969	supt4h1	50	81.034	ENSTGUG00000003297	SUPT4H1	100	81.034	Taeniopygia_guttata
ENSDARG00000113969	supt4h1	100	95.726	ENSTRUG00000021118	supt4h1	100	95.726	Takifugu_rubripes
ENSDARG00000113969	supt4h1	100	95.726	ENSTNIG00000008553	supt4h1	100	95.726	Tetraodon_nigroviridis
ENSDARG00000113969	supt4h1	100	88.034	ENSUAMG00000005160	SUPT4H1	100	88.034	Ursus_americanus
ENSDARG00000113969	supt4h1	100	88.034	ENSUMAG00000022805	SUPT4H1	100	88.034	Ursus_maritimus
ENSDARG00000113969	supt4h1	80	86.170	ENSVPAG00000009628	SUPT4H1	100	86.170	Vicugna_pacos
ENSDARG00000113969	supt4h1	100	88.034	ENSVVUG00000012505	SUPT4H1	100	88.034	Vulpes_vulpes
ENSDARG00000113969	supt4h1	100	72.881	ENSXETG00000025331	supt4h1	100	72.881	Xenopus_tropicalis
ENSDARG00000113969	supt4h1	80	94.681	ENSXCOG00000005652	supt4h1	100	94.681	Xiphophorus_couchianus
ENSDARG00000113969	supt4h1	100	94.872	ENSXMAG00000005633	supt4h1	100	94.872	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000993	RNA polymerase II complex binding	21873635.	IBA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006325	chromatin organization	21873635.	IBA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0032044	DSIF complex	21873635.	IBA	Component
GO:0032044	DSIF complex	-	ISS	Component
GO:0032786	positive regulation of DNA-templated transcription, elongation	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function