EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000113992 (Gene tree)
Gene ID
567047
Gene Symbol
apobec2b
Alias
apo2b
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide-like 2b
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
7556 bases
Position
chr23:19213472-19221027
Accession
ZDB-GENE-090618-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000150595APOBEC_NPF08210.111.8e-4611
ENSDARP00000150595APOBEC_CPF05240.144.9e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000185985-822-ENSDARP00000150595273 (aa)-A0A2R8Q022
Gene Model
Click here to download ENSDARG00000113992's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000113992's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000113992apobec2b10054.710ENSDARG00000018881apobec2a8460.944
ENSDARG00000113992apobec2b6234.254ENSDARG00000015734aicda8634.254
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000113992apobec2b7758.962ENSG00000124701APOBEC29558.065Homo_sapiens
ENSDARG00000113992apobec2b10054.804ENSAPOG00000019390apobec2b8459.389Acanthochromis_polyacanthus
ENSDARG00000113992apobec2b7354.680ENSAMEG00000004467APOBEC28154.680Ailuropoda_melanoleuca
ENSDARG00000113992apobec2b9560.076ENSACIG00000002472APOBEC29461.842Amphilophus_citrinellus
ENSDARG00000113992apobec2b6960.317ENSACIG00000016370apobec2a7260.317Amphilophus_citrinellus
ENSDARG00000113992apobec2b8855.833ENSAOCG00000003291apobec2a8261.576Amphiprion_ocellaris
ENSDARG00000113992apobec2b9557.993ENSAOCG00000023355apobec2b8459.389Amphiprion_ocellaris
ENSDARG00000113992apobec2b9452.713ENSAPEG00000003630apobec2a8261.084Amphiprion_percula
ENSDARG00000113992apobec2b9556.391ENSAPEG00000004591apobec2b8458.952Amphiprion_percula
ENSDARG00000113992apobec2b10057.500ENSATEG00000023043APOBEC28462.069Anabas_testudineus
ENSDARG00000113992apobec2b10055.109ENSATEG00000000956apobec2a9866.292Anabas_testudineus
ENSDARG00000113992apobec2b8254.113ENSAPLG00000002895APOBEC29953.712Anas_platyrhynchos
ENSDARG00000113992apobec2b6956.771ENSACAG00000016506APOBEC29558.889Anolis_carolinensis
ENSDARG00000113992apobec2b7758.491ENSANAG00000026993APOBEC29557.604Aotus_nancymaae
ENSDARG00000113992apobec2b9558.935ENSACLG00000007634APOBEC28460.965Astatotilapia_calliptera
ENSDARG00000113992apobec2b6460.795ENSACLG00000026736-9760.795Astatotilapia_calliptera
ENSDARG00000113992apobec2b7061.538ENSAMXG00000042992apobec2a7563.590Astyanax_mexicanus
ENSDARG00000113992apobec2b8274.667ENSAMXG00000015966apobec2b8175.109Astyanax_mexicanus
ENSDARG00000113992apobec2b7757.075ENSBTAG00000005974APOBEC26657.075Bos_taurus
ENSDARG00000113992apobec2b7758.491ENSCJAG00000004063APOBEC29557.604Callithrix_jacchus
ENSDARG00000113992apobec2b7757.547ENSCAFG00000001575APOBEC29357.547Canis_familiaris
ENSDARG00000113992apobec2b7758.019ENSCAFG00020008306APOBEC29358.019Canis_lupus_dingo
ENSDARG00000113992apobec2b7757.075ENSCHIG00000026348APOBEC29357.075Capra_hircus
ENSDARG00000113992apobec2b7757.075ENSTSYG00000008206APOBEC29855.263Carlito_syrichta
ENSDARG00000113992apobec2b7060.104ENSCAPG00000015084APOBEC28560.104Cavia_aperea
ENSDARG00000113992apobec2b7060.104ENSCPOG00000036103APOBEC28560.104Cavia_porcellus
ENSDARG00000113992apobec2b7758.491ENSCCAG00000033987APOBEC29557.604Cebus_capucinus
ENSDARG00000113992apobec2b7758.962ENSCATG00000010691APOBEC29358.962Cercocebus_atys
ENSDARG00000113992apobec2b7060.622ENSCLAG00000013817APOBEC28560.622Chinchilla_lanigera
ENSDARG00000113992apobec2b7758.962ENSCSAG00000011177APOBEC29558.065Chlorocebus_sabaeus
ENSDARG00000113992apobec2b6560.556ENSCHOG00000008930APOBEC210060.556Choloepus_hoffmanni
ENSDARG00000113992apobec2b6758.824ENSCPBG00000017469APOBEC29953.881Chrysemys_picta_bellii
ENSDARG00000113992apobec2b7758.491ENSCANG00000035072APOBEC29557.604Colobus_angolensis_palliatus
ENSDARG00000113992apobec2b7954.867ENSCGRG00001014983Apobec29954.867Cricetulus_griseus_chok1gshd
ENSDARG00000113992apobec2b7954.867ENSCGRG00000007835Apobec29954.867Cricetulus_griseus_crigri
ENSDARG00000113992apobec2b7061.053ENSCSEG00000000690-8853.165Cynoglossus_semilaevis
ENSDARG00000113992apobec2b8561.111ENSCSEG00000020201apobec2a9161.739Cynoglossus_semilaevis
ENSDARG00000113992apobec2b8561.207ENSCVAG00000012342apobec2b8561.304Cyprinodon_variegatus
ENSDARG00000113992apobec2b7039.024ENSDNOG00000033914APOBEC29338.667Dasypus_novemcinctus
ENSDARG00000113992apobec2b8156.000ENSDORG00000006447Apobec29455.752Dipodomys_ordii
ENSDARG00000113992apobec2b7059.067ENSETEG00000000624APOBEC210053.275Echinops_telfairi
ENSDARG00000113992apobec2b7054.688ENSEASG00005002937APOBEC29854.688Equus_asinus_asinus
ENSDARG00000113992apobec2b7757.547ENSECAG00000006576APOBEC29855.357Equus_caballus
ENSDARG00000113992apobec2b7754.717ENSEEUG00000006046APOBEC29354.717Erinaceus_europaeus
ENSDARG00000113992apobec2b9854.545ENSELUG00000003736apobec2a7466.977Esox_lucius
ENSDARG00000113992apobec2b7757.547ENSFCAG00000004108APOBEC29357.547Felis_catus
ENSDARG00000113992apobec2b6850.000ENSFALG00000003910APOBEC29347.642Ficedula_albicollis
ENSDARG00000113992apobec2b7062.176ENSFDAG00000006015APOBEC28662.176Fukomys_damarensis
ENSDARG00000113992apobec2b7763.507ENSFHEG00000005492apobec2b9660.262Fundulus_heteroclitus
ENSDARG00000113992apobec2b6566.854ENSGMOG00000007028apobec2a10066.854Gadus_morhua
ENSDARG00000113992apobec2b7459.606ENSGMOG00000006819apobec2b9355.365Gadus_morhua
ENSDARG00000113992apobec2b7756.338ENSGALG00000003226APOBEC29556.338Gallus_gallus
ENSDARG00000113992apobec2b8562.069ENSGAFG00000007634apobec2b7462.445Gambusia_affinis
ENSDARG00000113992apobec2b8958.025ENSGACG00000009663apobec2b9860.889Gasterosteus_aculeatus
ENSDARG00000113992apobec2b7068.421ENSGACG00000011671apobec2a10068.421Gasterosteus_aculeatus
ENSDARG00000113992apobec2b6758.824ENSGAGG00000010347APOBEC29955.157Gopherus_agassizii
ENSDARG00000113992apobec2b7758.962ENSGGOG00000001099APOBEC29358.065Gorilla_gorilla
ENSDARG00000113992apobec2b9558.935ENSHBUG00000005993apobec2b8460.965Haplochromis_burtoni
ENSDARG00000113992apobec2b9555.039ENSHBUG00000015890apobec2a8164.039Haplochromis_burtoni
ENSDARG00000113992apobec2b7060.104ENSHGLG00000017169APOBEC29853.947Heterocephalus_glaber_female
ENSDARG00000113992apobec2b7060.104ENSHGLG00100019442APOBEC29853.947Heterocephalus_glaber_male
ENSDARG00000113992apobec2b9558.238ENSHCOG00000002712APOBEC28659.052Hippocampus_comes
ENSDARG00000113992apobec2b9555.000ENSHCOG00000020319apobec2a8962.162Hippocampus_comes
ENSDARG00000113992apobec2b7761.905ENSIPUG00000017355apobec2a6558.442Ictalurus_punctatus
ENSDARG00000113992apobec2b10069.091ENSIPUG00000013784Apobec28476.211Ictalurus_punctatus
ENSDARG00000113992apobec2b7758.019ENSSTOG00000023643APOBEC29358.019Ictidomys_tridecemlineatus
ENSDARG00000113992apobec2b7756.604ENSJJAG00000009733Apobec29356.604Jaculus_jaculus
ENSDARG00000113992apobec2b9456.538ENSKMAG00000020631apobec2b8458.772Kryptolebias_marmoratus
ENSDARG00000113992apobec2b8958.197ENSLBEG00000025214apobec2a8962.385Labrus_bergylta
ENSDARG00000113992apobec2b8257.333ENSLBEG00000009422-8556.504Labrus_bergylta
ENSDARG00000113992apobec2b8356.828ENSLACG00000015985APOBEC29656.828Latimeria_chalumnae
ENSDARG00000113992apobec2b7268.020ENSLOCG00000012415apobec2b9956.338Lepisosteus_oculatus
ENSDARG00000113992apobec2b7758.962ENSLAFG00000016563APOBEC29358.962Loxodonta_africana
ENSDARG00000113992apobec2b7758.962ENSMFAG00000044645APOBEC29558.065Macaca_fascicularis
ENSDARG00000113992apobec2b7758.962ENSMMUG00000021171APOBEC29558.065Macaca_mulatta
ENSDARG00000113992apobec2b7758.962ENSMNEG00000045497APOBEC29558.065Macaca_nemestrina
ENSDARG00000113992apobec2b7758.962ENSMLEG00000028328APOBEC29558.065Mandrillus_leucophaeus
ENSDARG00000113992apobec2b9556.180ENSMAMG00000007926APOBEC28258.772Mastacembelus_armatus
ENSDARG00000113992apobec2b9459.302ENSMAMG00000023685apobec2a8466.216Mastacembelus_armatus
ENSDARG00000113992apobec2b9558.555ENSMZEG00005027159APOBEC28460.965Maylandia_zebra
ENSDARG00000113992apobec2b8957.025ENSMZEG00005005240-8863.372Maylandia_zebra
ENSDARG00000113992apobec2b7755.869ENSMGAG00000010173APOBEC29459.116Meleagris_gallopavo
ENSDARG00000113992apobec2b8155.804ENSMAUG00000011016Apobec29855.804Mesocricetus_auratus
ENSDARG00000113992apobec2b7757.075ENSMICG00000043339APOBEC29357.075Microcebus_murinus
ENSDARG00000113992apobec2b7756.604ENSMOCG00000001904Apobec29356.604Microtus_ochrogaster
ENSDARG00000113992apobec2b9556.107ENSMMOG00000008681apobec2b8759.072Mola_mola
ENSDARG00000113992apobec2b7953.182ENSMODG00000013090APOBEC29553.182Monodelphis_domestica
ENSDARG00000113992apobec2b7267.677ENSMALG00000020523apobec2a7967.677Monopterus_albus
ENSDARG00000113992apobec2b10056.204ENSMALG00000013779APOBEC28559.389Monopterus_albus
ENSDARG00000113992apobec2b7756.604MGP_CAROLIEiJ_G0021727Apobec29356.604Mus_caroli
ENSDARG00000113992apobec2b7756.604ENSMUSG00000040694Apobec29356.604Mus_musculus
ENSDARG00000113992apobec2b7756.604MGP_PahariEiJ_G0020716Apobec29356.604Mus_pahari
ENSDARG00000113992apobec2b7756.604ENSMPUG00000013691APOBEC28956.604Mustela_putorius_furo
ENSDARG00000113992apobec2b7755.660ENSMLUG00000011327APOBEC29055.660Myotis_lucifugus
ENSDARG00000113992apobec2b7758.019ENSNGAG00000013717Apobec29358.019Nannospalax_galili
ENSDARG00000113992apobec2b10056.835ENSNBRG00000018806apobec2b7561.404Neolamprologus_brichardi
ENSDARG00000113992apobec2b7266.667ENSNBRG00000021776apobec2a8563.256Neolamprologus_brichardi
ENSDARG00000113992apobec2b7758.962ENSNLEG00000005057APOBEC29558.065Nomascus_leucogenys
ENSDARG00000113992apobec2b7955.000ENSMEUG00000011623APOBEC29555.000Notamacropus_eugenii
ENSDARG00000113992apobec2b7060.622ENSOPRG00000014808APOBEC28560.622Ochotona_princeps
ENSDARG00000113992apobec2b7060.104ENSODEG00000016183APOBEC28460.104Octodon_degus
ENSDARG00000113992apobec2b9556.202ENSONIG00000004644-8164.216Oreochromis_niloticus
ENSDARG00000113992apobec2b9560.755ENSONIG00000012289apobec2b8463.478Oreochromis_niloticus
ENSDARG00000113992apobec2b6159.412ENSOANG00000000824APOBEC29857.692Ornithorhynchus_anatinus
ENSDARG00000113992apobec2b7061.140ENSOCUG00000028008APOBEC28561.140Oryctolagus_cuniculus
ENSDARG00000113992apobec2b8657.983ENSORLG00000010752apobec2a9659.307Oryzias_latipes
ENSDARG00000113992apobec2b9556.705ENSORLG00000022372APOBEC28460.965Oryzias_latipes
ENSDARG00000113992apobec2b9557.088ENSORLG00020006164APOBEC28461.404Oryzias_latipes_hni
ENSDARG00000113992apobec2b8657.983ENSORLG00020004153apobec2a9659.307Oryzias_latipes_hni
ENSDARG00000113992apobec2b8657.983ENSORLG00015021781apobec2a9659.307Oryzias_latipes_hsok
ENSDARG00000113992apobec2b9557.088ENSORLG00015022089-8461.404Oryzias_latipes_hsok
ENSDARG00000113992apobec2b10055.678ENSOMEG00000015449APOBEC29659.414Oryzias_melastigma
ENSDARG00000113992apobec2b8558.333ENSOMEG00000001311apobec2a9658.369Oryzias_melastigma
ENSDARG00000113992apobec2b7757.547ENSOGAG00000002632APOBEC29357.547Otolemur_garnettii
ENSDARG00000113992apobec2b7756.604ENSOARG00000000820APOBEC29356.604Ovis_aries
ENSDARG00000113992apobec2b7758.962ENSPPAG00000035598APOBEC29358.065Pan_paniscus
ENSDARG00000113992apobec2b7757.547ENSPPRG00000008530APOBEC29357.547Panthera_pardus
ENSDARG00000113992apobec2b7060.104ENSPTIG00000011084APOBEC28660.104Panthera_tigris_altaica
ENSDARG00000113992apobec2b7758.962ENSPTRG00000029679APOBEC29358.065Pan_troglodytes
ENSDARG00000113992apobec2b7758.962ENSPANG00000007121APOBEC29558.065Papio_anubis
ENSDARG00000113992apobec2b10062.950ENSPKIG00000004741apobec2b8169.778Paramormyrops_kingsleyae
ENSDARG00000113992apobec2b7868.396ENSPKIG00000005395apobec2a8568.396Paramormyrops_kingsleyae
ENSDARG00000113992apobec2b6759.893ENSPSIG00000013480APOBEC29556.388Pelodiscus_sinensis
ENSDARG00000113992apobec2b9458.015ENSPMGG00000002686APOBEC26958.723Periophthalmus_magnuspinnatus
ENSDARG00000113992apobec2b7865.888ENSPMGG00000004044apobec2a8565.888Periophthalmus_magnuspinnatus
ENSDARG00000113992apobec2b7756.604ENSPEMG00000005724Apobec29356.604Peromyscus_maniculatus_bairdii
ENSDARG00000113992apobec2b8561.207ENSPFOG00000001216apobec2b8561.572Poecilia_formosa
ENSDARG00000113992apobec2b9557.252ENSPLAG00000002074apobec2b9362.069Poecilia_latipinna
ENSDARG00000113992apobec2b8561.638ENSPMEG00000017537apobec2b8562.009Poecilia_mexicana
ENSDARG00000113992apobec2b8561.638ENSPREG00000020060apobec2b7462.009Poecilia_reticulata
ENSDARG00000113992apobec2b7758.019ENSPPYG00000016586APOBEC29557.143Pongo_abelii
ENSDARG00000113992apobec2b6960.733ENSPCAG00000011433APOBEC210060.733Procavia_capensis
ENSDARG00000113992apobec2b7758.019ENSPCOG00000026935APOBEC29954.741Propithecus_coquereli
ENSDARG00000113992apobec2b7756.132ENSPVAG00000008316APOBEC29356.132Pteropus_vampyrus
ENSDARG00000113992apobec2b9558.935ENSPNYG00000016747apobec2b8460.965Pundamilia_nyererei
ENSDARG00000113992apobec2b7977.674ENSPNAG00000013666apobec2b8276.316Pygocentrus_nattereri
ENSDARG00000113992apobec2b9952.747ENSPNAG00000010382apobec2a8058.525Pygocentrus_nattereri
ENSDARG00000113992apobec2b7756.604ENSRNOG00000012303Apobec29356.604Rattus_norvegicus
ENSDARG00000113992apobec2b7758.019ENSRBIG00000044756APOBEC29557.143Rhinopithecus_bieti
ENSDARG00000113992apobec2b7758.491ENSRROG00000030082APOBEC29557.604Rhinopithecus_roxellana
ENSDARG00000113992apobec2b7758.491ENSSBOG00000028496APOBEC29557.604Saimiri_boliviensis_boliviensis
ENSDARG00000113992apobec2b7953.636ENSSHAG00000017771APOBEC29852.423Sarcophilus_harrisii
ENSDARG00000113992apobec2b6455.747ENSSFOG00015005437-7355.747Scleropages_formosus
ENSDARG00000113992apobec2b10062.094ENSSFOG00015022920apobec210062.094Scleropages_formosus
ENSDARG00000113992apobec2b7065.625ENSSMAG00000005110APOBEC28560.338Scophthalmus_maximus
ENSDARG00000113992apobec2b10054.745ENSSMAG00000001011apobec2a6560.811Scophthalmus_maximus
ENSDARG00000113992apobec2b8858.921ENSSDUG00000007013apobec2a8861.778Seriola_dumerili
ENSDARG00000113992apobec2b8261.404ENSSDUG00000014543apobec2b8461.373Seriola_dumerili
ENSDARG00000113992apobec2b8756.735ENSSLDG00000020199apobec2a8859.821Seriola_lalandi_dorsalis
ENSDARG00000113992apobec2b8261.404ENSSLDG00000003321apobec2b8461.373Seriola_lalandi_dorsalis
ENSDARG00000113992apobec2b6555.978ENSSPUG00000010839APOBEC28857.065Sphenodon_punctatus
ENSDARG00000113992apobec2b8955.285ENSSPAG00000016299-8063.636Stegastes_partitus
ENSDARG00000113992apobec2b10056.475ENSSPAG00000005253apobec2b8460.262Stegastes_partitus
ENSDARG00000113992apobec2b7756.604ENSSSCG00000036018APOBEC29356.604Sus_scrofa
ENSDARG00000113992apobec2b6858.421ENSTGUG00000018533APOBEC29455.189Taeniopygia_guttata
ENSDARG00000113992apobec2b7564.878ENSTRUG00000009123apobec2a9160.793Takifugu_rubripes
ENSDARG00000113992apobec2b10052.518ENSTRUG00000012839apobec2b8954.852Takifugu_rubripes
ENSDARG00000113992apobec2b9356.420ENSTNIG00000015038apobec2b8954.430Tetraodon_nigroviridis
ENSDARG00000113992apobec2b7757.547ENSTBEG00000003553APOBEC29357.547Tupaia_belangeri
ENSDARG00000113992apobec2b7757.075ENSTTRG00000013392APOBEC29357.075Tursiops_truncatus
ENSDARG00000113992apobec2b7757.547ENSUAMG00000027667APOBEC29157.547Ursus_americanus
ENSDARG00000113992apobec2b7758.019ENSVVUG00000026617APOBEC29358.019Vulpes_vulpes
ENSDARG00000113992apobec2b7749.107ENSXETG00000008007apobec29249.107Xenopus_tropicalis
ENSDARG00000113992apobec2b8560.593ENSXCOG00000007398apobec2b9059.914Xiphophorus_couchianus
ENSDARG00000113992apobec2b8560.593ENSXMAG00000008134apobec2b8560.944Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003824catalytic activity-IEAFunction
GO:0005515protein binding25190811.IPIFunction
GO:0031099regeneration25190811.IGIProcess
GO:0043388positive regulation of DNA binding25190811.IDAProcess
GO:0043697cell dedifferentiation22262907.IMPProcess
GO:0060538skeletal muscle organ development20440001.IMPProcess
GO:0070654sensory epithelium regeneration22262907.IMPProcess

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