EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000114797 (Gene tree)
Gene ID: 557482
Gene Symbol: rab3b
Alias: si:dkey-171o17.3
Full Name: RAB3B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 9513 bases
Position: chr22:17203752-17213264
Accession: ZDB-GENE-050208-660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000114157	MMR_HSR1	PF01926.23	7e-05	1	1
ENSDARP00000154264	MMR_HSR1	PF01926.23	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000181267	-	5067	XM_680562	ENSDARP00000154264	217 (aa)	XP_685654	Q1L986
ENSDART00000143376	-	822	-	ENSDARP00000114157	217 (aa)	-	Q1L986

Gene Model

Click here to download ENSDARG00000114797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000114797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000114797	rab3b	72	42.038	ENSDARG00000031343	rab6bb	75	42.038
ENSDARG00000114797	rab3b	73	42.857	ENSDARG00000019312	rab39ba	76	42.857
ENSDARG00000114797	rab3b	94	36.792	ENSDARG00000052954	rab25b	98	36.792
ENSDARG00000114797	rab3b	83	38.122	ENSDARG00000041878	rab11ba	84	37.209
ENSDARG00000114797	rab3b	79	50.877	ENSDARG00000103934	megf8	99	50.877
ENSDARG00000114797	rab3b	72	41.401	ENSDARG00000034522	rab6ba	75	41.401
ENSDARG00000114797	rab3b	73	40.881	ENSDARG00000074246	rab14	74	40.881
ENSDARG00000114797	rab3b	72	42.038	ENSDARG00000103714	rab6a	75	42.038
ENSDARG00000114797	rab3b	73	32.704	ENSDARG00000038225	nras	83	32.704
ENSDARG00000114797	rab3b	73	36.025	ENSDARG00000100379	si:dkey-34d22.2	87	35.404
ENSDARG00000114797	rab3b	73	31.447	ENSDARG00000013161	zgc:55558	84	31.447
ENSDARG00000114797	rab3b	67	32.692	ENSDARG00000046013	rasl11a	61	32.692
ENSDARG00000114797	rab3b	88	35.096	ENSDARG00000090086	rab11bb	95	35.096
ENSDARG00000114797	rab3b	68	31.126	ENSDARG00000010977	rab34b	67	30.682
ENSDARG00000114797	rab3b	82	39.548	ENSDARG00000014340	rab11al	82	39.548
ENSDARG00000114797	rab3b	74	33.742	ENSDARG00000006553	rras	82	33.333
ENSDARG00000114797	rab3b	73	40.252	ENSDARG00000035188	rab14l	74	40.252
ENSDARG00000114797	rab3b	68	84.459	ENSDARG00000018107	rab3da	88	84.459
ENSDARG00000114797	rab3b	74	37.805	ENSDARG00000102580	CU571310.1	77	37.805
ENSDARG00000114797	rab3b	94	37.143	ENSDARG00000041450	rab11a	97	37.143
ENSDARG00000114797	rab3b	82	31.319	ENSDARG00000052290	rab33ba	76	31.319
ENSDARG00000114797	rab3b	82	47.802	ENSDARG00000102078	CABZ01072548.1	93	47.802
ENSDARG00000114797	rab3b	68	36.735	ENSDARG00000004151	rab23	70	35.542
ENSDARG00000114797	rab3b	77	46.746	ENSDARG00000089428	rab12	86	42.365
ENSDARG00000114797	rab3b	80	42.775	ENSDARG00000037884	rab30	85	42.775
ENSDARG00000114797	rab3b	73	33.537	ENSDARG00000103391	rab9b	81	33.537
ENSDARG00000114797	rab3b	90	30.000	ENSDARG00000045027	rab9a	97	30.000
ENSDARG00000114797	rab3b	92	45.098	ENSDARG00000029663	rab1ab	98	45.098
ENSDARG00000114797	rab3b	73	35.802	ENSDARG00000087243	zgc:100918	79	35.802
ENSDARG00000114797	rab3b	80	34.286	ENSDARG00000036252	rras2	85	34.286
ENSDARG00000114797	rab3b	74	46.914	ENSDARG00000098344	rab18b	79	46.914
ENSDARG00000114797	rab3b	90	34.975	ENSDARG00000018602	rab5aa	89	34.975
ENSDARG00000114797	rab3b	90	34.826	ENSDARG00000007257	rab5ab	89	34.826
ENSDARG00000114797	rab3b	74	31.288	ENSDARG00000014058	rab36	63	31.098
ENSDARG00000114797	rab3b	73	30.189	ENSDARG00000010844	kras	84	30.189
ENSDARG00000114797	rab3b	71	38.994	ENSDARG00000026098	si:dkey-13a21.4	77	38.994
ENSDARG00000114797	rab3b	73	36.810	ENSDARG00000021287	rab7b	80	36.810
ENSDARG00000114797	rab3b	51	38.182	ENSDARG00000099205	CABZ01081908.1	94	38.182
ENSDARG00000114797	rab3b	54	30.252	ENSDARG00000062865	mras	65	30.833
ENSDARG00000114797	rab3b	88	38.542	ENSDARG00000029885	rab41	91	37.879
ENSDARG00000114797	rab3b	81	35.393	ENSDARG00000003257	zgc:101559	74	35.393
ENSDARG00000114797	rab3b	78	50.888	ENSDARG00000056479	rab1bb	84	50.888
ENSDARG00000114797	rab3b	71	35.625	ENSDARG00000057394	rab33a	68	35.625
ENSDARG00000114797	rab3b	73	35.185	ENSDARG00000020497	rab7a	78	35.185
ENSDARG00000114797	rab3b	94	37.500	ENSDARG00000058800	rab25a	98	37.500
ENSDARG00000114797	rab3b	79	37.427	ENSDARG00000015807	rab22a	83	37.427
ENSDARG00000114797	rab3b	87	46.277	ENSDARG00000052263	rab1aa	91	46.277
ENSDARG00000114797	rab3b	73	49.367	ENSDARG00000033056	zgc:171927	75	49.367
ENSDARG00000114797	rab3b	82	30.168	ENSDARG00000098497	hrasa	83	31.447
ENSDARG00000114797	rab3b	92	45.050	ENSDARG00000058044	rab1ba	100	45.050
ENSDARG00000114797	rab3b	71	30.818	ENSDARG00000070916	dnajc27	60	30.303
ENSDARG00000114797	rab3b	77	46.108	ENSDARG00000026484	rab15	79	46.108
ENSDARG00000114797	rab3b	73	42.236	ENSDARG00000036501	rab39bb	76	42.236
ENSDARG00000114797	rab3b	80	38.728	ENSDARG00000020261	rab2a	99	34.286
ENSDARG00000114797	rab3b	74	50.000	ENSDARG00000037967	si:dkey-16l2.16	89	55.660
ENSDARG00000114797	rab3b	74	46.296	ENSDARG00000055291	rab18a	79	46.296
ENSDARG00000114797	rab3b	80	39.326	ENSDARG00000034215	rab42a	84	39.326
ENSDARG00000114797	rab3b	93	46.766	ENSDARG00000034771	rab13	98	46.766
ENSDARG00000114797	rab3b	73	32.075	ENSDARG00000005651	hrasb	97	30.986
ENSDARG00000114797	rab3b	81	47.429	ENSDARG00000058425	rab35b	87	47.429
ENSDARG00000114797	rab3b	79	32.000	ENSDARG00000045628	rab34a	67	32.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000114797	rab3b	99	82.488	ENSXETG00000008055	rab3b	99	83.673	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005768	endosome	21873635.	IBA	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006904	vesicle docking involved in exocytosis	21873635.	IBA	Process
GO:0008021	synaptic vesicle	21873635.	IBA	Component
GO:0009306	protein secretion	21873635.	IBA	Process
GO:0017157	regulation of exocytosis	21873635.	IBA	Process
GO:0031982	vesicle	21873635.	IBA	Component
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0072659	protein localization to plasma membrane	21873635.	IBA	Process