EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000115079 (Gene tree)
Gene ID: -
Gene Symbol: zgc:174353
Alias: -
Full Name: zgc:174353
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 1921 bases
Position: chr11:12377621-12379541
Accession: ZDB-GENE-071004-121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000148719	zf-CCHC_2	PF13696.6	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000187551	-	837	-	ENSDARP00000148719	278 (aa)	-	F1RCI5
ENSDART00000171717	-	1020	-	ENSDARP00000134737	174 (aa)	XP_021328071	A0A0R4IKB2

Gene Model

Click here to download ENSDARG00000115079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000115079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000115079	zgc:174353	100	98.561	ENSDARG00000111826	zgc:174354	100	98.561
ENSDARG00000115079	zgc:174353	100	98.921	ENSDARG00000113889	zgc:174355	100	98.921
ENSDARG00000115079	zgc:174353	100	98.201	ENSDARG00000116389	CR450764.8	100	98.201
ENSDARG00000115079	zgc:174353	100	98.561	ENSDARG00000088552	si:dkey-23f9.13	100	98.561
ENSDARG00000115079	zgc:174353	100	98.921	ENSDARG00000100754	CR450764.1	100	98.921
ENSDARG00000115079	zgc:174353	100	98.201	ENSDARG00000113994	zgc:174354	100	98.201
ENSDARG00000115079	zgc:174353	100	98.561	ENSDARG00000110591	si:dkey-27d5.6	100	98.561
ENSDARG00000115079	zgc:174353	100	97.842	ENSDARG00000094335	si:dkey-23f9.12	100	97.842
ENSDARG00000115079	zgc:174353	100	97.842	ENSDARG00000070812	si:ch211-156l18.6	100	97.842
ENSDARG00000115079	zgc:174353	100	95.324	ENSDARG00000094196	si:dkey-27d5.10	100	95.324
ENSDARG00000115079	zgc:174353	100	99.281	ENSDARG00000112365	zgc:174353	100	99.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000115079	zgc:174353	71	36.283	ENSCING00000017248	-	99	34.483	Ciona_intestinalis
ENSDARG00000115079	zgc:174353	68	37.736	ENSCSAVG00000002639	-	100	37.736	Ciona_savignyi
ENSDARG00000115079	zgc:174353	57	44.937	ENSELUG00000017972	-	59	47.154	Esox_lucius
ENSDARG00000115079	zgc:174353	85	50.633	ENSGMOG00000004819	-	100	50.633	Gadus_morhua
ENSDARG00000115079	zgc:174353	50	46.763	ENSGACG00000016781	-	51	47.154	Gasterosteus_aculeatus
ENSDARG00000115079	zgc:174353	79	38.017	ENSLBEG00000021906	-	100	39.496	Labrus_bergylta
ENSDARG00000115079	zgc:174353	84	50.417	ENSPFOG00000022154	-	59	49.789	Poecilia_formosa
ENSDARG00000115079	zgc:174353	83	30.038	YKL059C	-	59	30.337	Saccharomyces_cerevisiae
ENSDARG00000115079	zgc:174353	50	49.286	ENSSMAG00000008324	-	54	52.381	Scophthalmus_maximus
ENSDARG00000115079	zgc:174353	54	44.966	ENSTNIG00000005451	-	54	45.736	Tetraodon_nigroviridis