EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000115326 (Gene tree)
Gene ID: -
Gene Symbol: znf1002
Alias: si:dkey-15h8.4
Full Name: zinc finger protein 1002
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4097 bases
Position: chr22:1821718-1825814
Accession: ZDB-GENE-050208-383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000114259	zf-C2H2	PF00096.26	3.8e-29	1	6
ENSDARP00000114259	zf-C2H2	PF00096.26	3.8e-29	2	6
ENSDARP00000114259	zf-C2H2	PF00096.26	3.8e-29	3	6
ENSDARP00000114259	zf-C2H2	PF00096.26	3.8e-29	4	6
ENSDARP00000114259	zf-C2H2	PF00096.26	3.8e-29	5	6
ENSDARP00000114259	zf-C2H2	PF00096.26	3.8e-29	6	6
ENSDARP00000114259	zf-met	PF12874.7	2.2e-09	1	3
ENSDARP00000114259	zf-met	PF12874.7	2.2e-09	2	3
ENSDARP00000114259	zf-met	PF12874.7	2.2e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000132220	-	792	-	ENSDARP00000114259	264 (aa)	-	E9QBK7

Gene Model

Click here to download ENSDARG00000115326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000115326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000115326	znf1002	90	66.010	ENSDARG00000071725	znf1167	99	60.891
ENSDARG00000115326	znf1002	94	62.500	ENSDARG00000093875	zgc:174224	80	60.526
ENSDARG00000115326	znf1002	99	77.778	ENSDARG00000102053	znf1164	100	76.522
ENSDARG00000115326	znf1002	92	54.733	ENSDARG00000109703	FO834825.1	100	54.733
ENSDARG00000115326	znf1002	94	61.372	ENSDARG00000098613	si:dkey-15h8.16	93	59.036
ENSDARG00000115326	znf1002	82	53.892	ENSDARG00000014775	zgc:113220	99	51.471
ENSDARG00000115326	znf1002	81	61.033	ENSDARG00000073821	znf1177	85	60.099
ENSDARG00000115326	znf1002	90	56.771	ENSDARG00000071714	znf983	98	59.375
ENSDARG00000115326	znf1002	96	71.176	ENSDARG00000092088	si:dkey-4c15.8	99	69.298
ENSDARG00000115326	znf1002	74	59.184	ENSDARG00000098923	zgc:173577	96	59.184
ENSDARG00000115326	znf1002	94	57.831	ENSDARG00000100882	znf1154	94	61.074
ENSDARG00000115326	znf1002	90	54.762	ENSDARG00000078159	zgc:175284	100	56.863
ENSDARG00000115326	znf1002	90	64.135	ENSDARG00000111899	zgc:171435	89	64.135
ENSDARG00000115326	znf1002	94	54.936	ENSDARG00000092246	si:dkey-20i20.3	89	54.936
ENSDARG00000115326	znf1002	83	49.735	ENSDARG00000095704	si:dkey-4c15.13	96	68.103
ENSDARG00000115326	znf1002	90	64.015	ENSDARG00000094736	znf1157	98	72.650
ENSDARG00000115326	znf1002	91	45.228	ENSDARG00000088927	CR450793.1	97	44.398
ENSDARG00000115326	znf1002	90	54.091	ENSDARG00000101885	si:dkey-20i20.11	97	56.364
ENSDARG00000115326	znf1002	90	68.776	ENSDARG00000104065	znf1154	97	68.776
ENSDARG00000115326	znf1002	94	57.971	ENSDARG00000093562	si:dkey-20i20.7	89	57.971
ENSDARG00000115326	znf1002	93	52.439	ENSDARG00000101044	si:ch73-138e16.6	100	51.613
ENSDARG00000115326	znf1002	98	60.847	ENSDARG00000094343	si:dkey-20i20.8	84	59.659
ENSDARG00000115326	znf1002	99	64.433	ENSDARG00000101425	si:dkey-1b17.5	90	62.360
ENSDARG00000115326	znf1002	73	64.773	ENSDARG00000077712	zgc:113886	98	57.051
ENSDARG00000115326	znf1002	90	63.978	ENSDARG00000088507	znf982	100	63.978
ENSDARG00000115326	znf1002	90	51.477	ENSDARG00000103827	znf1144	97	67.073
ENSDARG00000115326	znf1002	90	56.349	ENSDARG00000077085	zgc:110821	96	56.349
ENSDARG00000115326	znf1002	90	71.711	ENSDARG00000071833	znf1162	100	71.711
ENSDARG00000115326	znf1002	87	55.051	ENSDARG00000106565	CABZ01066720.1	95	55.051
ENSDARG00000115326	znf1002	99	68.702	ENSDARG00000112141	znf1169	86	66.129
ENSDARG00000115326	znf1002	76	54.592	ENSDARG00000106808	CU856622.1	100	54.592
ENSDARG00000115326	znf1002	96	61.417	ENSDARG00000102678	znf1181	92	61.446
ENSDARG00000115326	znf1002	82	52.128	ENSDARG00000113666	znf1173	76	49.275
ENSDARG00000115326	znf1002	96	67.021	ENSDARG00000100361	znf1174	93	72.289
ENSDARG00000115326	znf1002	74	58.673	ENSDARG00000103530	zgc:113102	95	58.673
ENSDARG00000115326	znf1002	90	54.340	ENSDARG00000092605	znf1003	93	56.226
ENSDARG00000115326	znf1002	90	53.279	ENSDARG00000094309	si:ch73-92e7.6	100	53.279
ENSDARG00000115326	znf1002	99	65.283	ENSDARG00000071790	znf1153	93	66.667
ENSDARG00000115326	znf1002	96	56.209	ENSDARG00000100544	zgc:173486	98	56.757
ENSDARG00000115326	znf1002	87	61.143	ENSDARG00000099618	si:dkey-1b17.6	93	64.655
ENSDARG00000115326	znf1002	95	58.333	ENSDARG00000101694	znf1184	94	65.863
ENSDARG00000115326	znf1002	89	50.909	ENSDARG00000095455	si:dkey-20i20.10	91	53.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000115326	znf1002	69	49.194	ENSACIG00000008886	znf1164	81	49.194	Amphilophus_citrinellus
ENSDARG00000115326	znf1002	69	44.186	ENSACLG00000000521	-	97	44.186	Astatotilapia_calliptera
ENSDARG00000115326	znf1002	69	41.489	ENSMZEG00005022161	-	92	36.429	Maylandia_zebra
ENSDARG00000115326	znf1002	73	43.023	ENSMZEG00005005162	-	80	43.023	Maylandia_zebra
ENSDARG00000115326	znf1002	69	43.784	ENSMZEG00005025568	-	79	43.784	Maylandia_zebra
ENSDARG00000115326	znf1002	66	45.113	ENSPMGG00000001558	znf1174	53	45.113	Periophthalmus_magnuspinnatus