EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000115655 (Gene tree)
Gene ID: -
Gene Symbol: znf1078
Alias: zgc:173711
Full Name: zinc finger protein 1078
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6914 bases
Position: chr4:69190524-69197437
Accession: ZDB-GENE-080218-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	1	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	2	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	3	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	4	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	5	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	6	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	7	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	8	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	9	10
ENSDARP00000130525	zf-C2H2	PF00096.26	1.9e-62	10	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	1	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	2	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	3	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	4	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	5	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	6	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	7	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	8	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	9	10
ENSDARP00000131044	zf-C2H2	PF00096.26	1.9e-62	10	10
ENSDARP00000130525	zf-met	PF12874.7	6.9e-06	1	1
ENSDARP00000131044	zf-met	PF12874.7	6.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000170595	-	1086	-	ENSDARP00000131044	361 (aa)	-	K7DY25
ENSDART00000168009	-	1796	-	ENSDARP00000130525	361 (aa)	-	K7DY25

Gene Model

Click here to download ENSDARG00000115655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000115655's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000115655	znf1078	99	47.671	ENSDARG00000102800	CABZ01081752.2	93	47.802
ENSDARG00000115655	znf1078	99	63.812	ENSDARG00000098087	si:dkey-30f3.2	99	65.193
ENSDARG00000115655	znf1078	99	58.753	ENSDARG00000101137	znf999	100	73.333
ENSDARG00000115655	znf1078	99	57.143	ENSDARG00000111465	znf1104	99	49.861
ENSDARG00000115655	znf1078	99	47.273	ENSDARG00000089715	si:cabz01054394.7	99	53.886
ENSDARG00000115655	znf1078	99	65.084	ENSDARG00000113808	si:dkeyp-82b4.6	96	65.642
ENSDARG00000115655	znf1078	100	64.103	ENSDARG00000096041	si:ch211-162i8.2	100	62.694
ENSDARG00000115655	znf1078	100	95.304	ENSDARG00000101327	znf1076	100	95.304
ENSDARG00000115655	znf1078	99	60.595	ENSDARG00000089814	znf1042	100	59.167
ENSDARG00000115655	znf1078	92	95.770	ENSDARG00000095605	CR846087.3	100	95.770
ENSDARG00000115655	znf1078	100	95.856	ENSDARG00000114947	BX465848.1	100	95.856
ENSDARG00000115655	znf1078	100	64.309	ENSDARG00000105067	znf1043	100	66.078
ENSDARG00000115655	znf1078	78	79.787	ENSDARG00000076272	znf1041	99	79.787
ENSDARG00000115655	znf1078	99	52.020	ENSDARG00000102027	si:dkey-172k15.11	96	52.020
ENSDARG00000115655	znf1078	100	61.905	ENSDARG00000091994	znf1048	100	55.952
ENSDARG00000115655	znf1078	99	44.784	ENSDARG00000090942	CABZ01054394.1	98	46.301
ENSDARG00000115655	znf1078	99	69.613	ENSDARG00000100001	znf1096	99	69.613
ENSDARG00000115655	znf1078	100	62.381	ENSDARG00000102600	CABZ01003344.1	100	56.429
ENSDARG00000115655	znf1078	100	62.381	ENSDARG00000092938	znf1047	100	56.190
ENSDARG00000115655	znf1078	100	64.103	ENSDARG00000094558	si:dkeyp-53e4.1	100	56.154
ENSDARG00000115655	znf1078	99	62.570	ENSDARG00000103721	si:dkey-122c11.7	99	63.687
ENSDARG00000115655	znf1078	100	64.194	ENSDARG00000090160	zgc:173709	100	56.777
ENSDARG00000115655	znf1078	99	65.266	ENSDARG00000102561	AL645691.1	97	65.826
ENSDARG00000115655	znf1078	99	59.777	ENSDARG00000111550	CABZ01002702.1	99	60.474
ENSDARG00000115655	znf1078	99	64.246	ENSDARG00000112103	si:dkey-16p19.1	99	65.084
ENSDARG00000115655	znf1078	99	49.162	ENSDARG00000109255	si:ch211-234c11.2	100	49.162
ENSDARG00000115655	znf1078	99	65.642	ENSDARG00000102008	si:dkey-72l17.6	99	66.480
ENSDARG00000115655	znf1078	99	55.228	ENSDARG00000098901	CABZ01002768.1	100	55.228
ENSDARG00000115655	znf1078	92	59.167	ENSDARG00000116177	znf1127	92	58.333
ENSDARG00000115655	znf1078	99	69.613	ENSDARG00000112725	si:dkey-22h13.2	99	69.613
ENSDARG00000115655	znf1078	100	96.409	ENSDARG00000099736	CABZ01075078.1	100	96.409
ENSDARG00000115655	znf1078	100	66.431	ENSDARG00000088000	znf1057	100	66.431
ENSDARG00000115655	znf1078	99	45.918	ENSDARG00000086223	si:ch73-144d13.4	100	45.918
ENSDARG00000115655	znf1078	99	50.416	ENSDARG00000087168	si:ch211-162i8.4	99	50.416
ENSDARG00000115655	znf1078	100	57.381	ENSDARG00000086449	znf1055	85	58.939
ENSDARG00000115655	znf1078	92	63.473	ENSDARG00000103495	zgc:173714	99	63.473
ENSDARG00000115655	znf1078	99	58.371	ENSDARG00000091477	znf1066	100	51.598
ENSDARG00000115655	znf1078	100	63.333	ENSDARG00000102673	si:dkey-26i24.1	100	56.280
ENSDARG00000115655	znf1078	99	48.214	ENSDARG00000089598	si:cabz01054396.2	100	53.261
ENSDARG00000115655	znf1078	99	66.851	ENSDARG00000114437	zgc:173705	99	66.851
ENSDARG00000115655	znf1078	86	60.129	ENSDARG00000100653	si:dkeyp-82b4.6	98	61.093
ENSDARG00000115655	znf1078	100	95.580	ENSDARG00000098430	znf1078	100	95.580
ENSDARG00000115655	znf1078	100	62.660	ENSDARG00000100961	zgc:174653	93	61.381
ENSDARG00000115655	znf1078	100	64.615	ENSDARG00000105306	si:dkeyp-44b5.5	100	57.179
ENSDARG00000115655	znf1078	99	69.890	ENSDARG00000115450	CABZ01012382.1	99	69.890
ENSDARG00000115655	znf1078	100	70.879	ENSDARG00000116216	znf1046	95	70.879
ENSDARG00000115655	znf1078	99	55.396	ENSDARG00000098071	znf1049	99	61.391
ENSDARG00000115655	znf1078	100	64.872	ENSDARG00000103471	si:dkey-199m13.4	100	56.923
ENSDARG00000115655	znf1078	99	51.117	ENSDARG00000098991	znf1095	98	51.955
ENSDARG00000115655	znf1078	99	59.050	ENSDARG00000100509	si:dkey-82i20.2	100	59.050
ENSDARG00000115655	znf1078	99	69.337	ENSDARG00000096189	si:dkey-54j5.2	99	69.337
ENSDARG00000115655	znf1078	100	58.095	ENSDARG00000104074	znf1052	100	60.476
ENSDARG00000115655	znf1078	78	70.673	ENSDARG00000112606	BX248128.2	100	70.673
ENSDARG00000115655	znf1078	99	68.508	ENSDARG00000105137	zgc:173705	99	68.508
ENSDARG00000115655	znf1078	100	56.429	ENSDARG00000098986	znf1040	100	57.381
ENSDARG00000115655	znf1078	99	47.802	ENSDARG00000103244	CABZ01081752.3	93	47.802
ENSDARG00000115655	znf1078	100	64.031	ENSDARG00000104407	BX649453.1	100	61.484
ENSDARG00000115655	znf1078	99	53.631	ENSDARG00000110852	znf1111	100	53.631
ENSDARG00000115655	znf1078	99	52.821	ENSDARG00000097812	si:ch73-144d13.5	99	52.821
ENSDARG00000115655	znf1078	100	58.810	ENSDARG00000096210	znf1050	100	61.667
ENSDARG00000115655	znf1078	100	64.962	ENSDARG00000110229	zgc:173702	100	57.033
ENSDARG00000115655	znf1078	100	69.611	ENSDARG00000098270	znf1053	100	69.611
ENSDARG00000115655	znf1078	92	50.256	ENSDARG00000116920	BX465848.2	91	52.571
ENSDARG00000115655	znf1078	99	47.177	ENSDARG00000074298	znf1015	100	50.588
ENSDARG00000115655	znf1078	99	50.000	ENSDARG00000114396	znf1017	98	45.257
ENSDARG00000115655	znf1078	91	52.727	ENSDARG00000113626	znf976	94	53.030
ENSDARG00000115655	znf1078	99	47.534	ENSDARG00000096856	znf1012	100	49.500
ENSDARG00000115655	znf1078	100	64.359	ENSDARG00000103636	zgc:173702	100	56.923
ENSDARG00000115655	znf1078	100	94.751	ENSDARG00000098196	znf1077	100	94.751
ENSDARG00000115655	znf1078	99	51.546	ENSDARG00000074365	zgc:171901	100	58.750
ENSDARG00000115655	znf1078	100	63.171	ENSDARG00000100842	si:ch211-223a21.4	100	61.757
ENSDARG00000115655	znf1078	99	64.345	ENSDARG00000114793	CU182823.4	98	64.903
ENSDARG00000115655	znf1078	99	52.486	ENSDARG00000092507	znf1013	98	52.486
ENSDARG00000115655	znf1078	99	59.050	ENSDARG00000098536	si:dkey-25i10.1	100	59.050
ENSDARG00000115655	znf1078	99	57.729	ENSDARG00000093994	znf1058	100	61.576
ENSDARG00000115655	znf1078	100	62.534	ENSDARG00000110658	zgc:174696	100	65.565
ENSDARG00000115655	znf1078	100	65.190	ENSDARG00000103310	znf1053	100	65.190
ENSDARG00000115655	znf1078	99	70.166	ENSDARG00000109381	CU457778.2	99	70.166
ENSDARG00000115655	znf1078	99	64.917	ENSDARG00000102791	zgc:174704	99	66.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000115655	znf1078	70	57.377	ENSTRUG00000022969	-	67	57.377	Takifugu_rubripes