EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000115857 (Gene tree)
Gene ID: 100538208
Gene Symbol: znf1001
Alias: zgc:174234
Full Name: zinc finger protein 1001
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 1083 bases
Position: chr3:7463168-7464250
Accession: ZDB-GENE-080213-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	1	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	2	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	3	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	4	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	5	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	6	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	7	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	8	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	9	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	10	11
ENSDARP00000136903	zf-C2H2	PF00096.26	1.7e-59	11	11
ENSDARP00000136903	zf-met	PF12874.7	8.5e-17	1	4
ENSDARP00000136903	zf-met	PF12874.7	8.5e-17	2	4
ENSDARP00000136903	zf-met	PF12874.7	8.5e-17	3	4
ENSDARP00000136903	zf-met	PF12874.7	8.5e-17	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000159873	-	1083	XM_003198046	ENSDARP00000136903	360 (aa)	XP_003198094	E7F8R5

Gene Model

Click here to download ENSDARG00000115857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000115857's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000115857	znf1001	97	64.035	ENSDARG00000100882	znf1154	77	54.698
ENSDARG00000115857	znf1001	100	52.247	ENSDARG00000113011	zgc:113102	95	50.996
ENSDARG00000115857	znf1001	93	58.084	ENSDARG00000115737	AL954741.2	99	58.084
ENSDARG00000115857	znf1001	93	60.643	ENSDARG00000093378	si:ch211-235i11.5	84	60.643
ENSDARG00000115857	znf1001	84	52.318	ENSDARG00000104065	znf1154	87	51.662
ENSDARG00000115857	znf1001	100	57.738	ENSDARG00000091679	FO704858.1	99	57.738
ENSDARG00000115857	znf1001	100	61.342	ENSDARG00000102411	CR847850.1	98	59.910
ENSDARG00000115857	znf1001	96	60.058	ENSDARG00000077712	zgc:113886	99	61.493
ENSDARG00000115857	znf1001	100	50.588	ENSDARG00000099172	BX000701.1	91	59.596
ENSDARG00000115857	znf1001	95	45.515	ENSDARG00000071589	si:dkey-253d23.2	97	44.928
ENSDARG00000115857	znf1001	98	48.193	ENSDARG00000079760	zgc:112998	85	48.193
ENSDARG00000115857	znf1001	94	47.550	ENSDARG00000098898	si:ch211-255f4.2	99	47.550
ENSDARG00000115857	znf1001	99	49.091	ENSDARG00000102678	znf1181	79	51.172
ENSDARG00000115857	znf1001	96	48.837	ENSDARG00000099618	si:dkey-1b17.6	91	48.256
ENSDARG00000115857	znf1001	97	48.819	ENSDARG00000094736	znf1157	85	54.464
ENSDARG00000115857	znf1001	96	54.167	ENSDARG00000111614	znf1183	89	52.652
ENSDARG00000115857	znf1001	98	47.000	ENSDARG00000089940	znf1008	97	46.061
ENSDARG00000115857	znf1001	100	99.722	ENSDARG00000102401	znf1001	100	99.722
ENSDARG00000115857	znf1001	97	46.685	ENSDARG00000087290	si:ch211-202h22.10	94	46.567
ENSDARG00000115857	znf1001	96	53.968	ENSDARG00000078281	zgc:173575	85	60.119
ENSDARG00000115857	znf1001	98	47.159	ENSDARG00000087839	si:dkey-33c14.6	94	47.159
ENSDARG00000115857	znf1001	96	58.882	ENSDARG00000097521	si:dkey-111k8.5	89	55.723
ENSDARG00000115857	znf1001	100	50.882	ENSDARG00000105074	BX000701.2	95	55.051
ENSDARG00000115857	znf1001	97	55.357	ENSDARG00000098021	si:dkey-111k8.2	87	58.081
ENSDARG00000115857	znf1001	98	49.045	ENSDARG00000078159	zgc:175284	88	49.275
ENSDARG00000115857	znf1001	100	60.825	ENSDARG00000098923	zgc:173577	99	60.825
ENSDARG00000115857	znf1001	98	49.008	ENSDARG00000101694	znf1184	85	49.008
ENSDARG00000115857	znf1001	93	64.035	ENSDARG00000100915	si:ch211-255f4.7	100	64.035
ENSDARG00000115857	znf1001	98	45.192	ENSDARG00000071790	znf1153	81	44.126
ENSDARG00000115857	znf1001	97	54.237	ENSDARG00000069869	zgc:113030	98	54.237
ENSDARG00000115857	znf1001	98	63.158	ENSDARG00000111465	znf1104	91	49.582
ENSDARG00000115857	znf1001	93	68.310	ENSDARG00000103777	znf1001	99	64.744
ENSDARG00000115857	znf1001	96	54.328	ENSDARG00000098604	si:dkey-14o6.4	87	54.328
ENSDARG00000115857	znf1001	94	46.087	ENSDARG00000102959	zgc:171220	95	46.087
ENSDARG00000115857	znf1001	96	47.727	ENSDARG00000101562	znf1014	89	47.727
ENSDARG00000115857	znf1001	93	49.102	ENSDARG00000014775	zgc:113220	91	49.102
ENSDARG00000115857	znf1001	99	48.000	ENSDARG00000097928	si:ch73-40a17.4	82	48.000
ENSDARG00000115857	znf1001	95	47.312	ENSDARG00000104798	BX510922.2	86	47.312
ENSDARG00000115857	znf1001	95	48.057	ENSDARG00000105075	BX324216.2	84	47.490
ENSDARG00000115857	znf1001	99	46.133	ENSDARG00000102282	CABZ01063298.1	95	46.133
ENSDARG00000115857	znf1001	93	53.420	ENSDARG00000094484	si:ch211-162i8.4	100	52.679
ENSDARG00000115857	znf1001	98	50.357	ENSDARG00000109255	si:ch211-234c11.2	92	49.107
ENSDARG00000115857	znf1001	98	51.479	ENSDARG00000113626	znf976	99	50.298
ENSDARG00000115857	znf1001	96	51.475	ENSDARG00000088507	znf982	83	66.667
ENSDARG00000115857	znf1001	97	63.959	ENSDARG00000053165	zgc:113377	80	63.959
ENSDARG00000115857	znf1001	93	56.902	ENSDARG00000088051	AL935044.1	99	53.067
ENSDARG00000115857	znf1001	98	59.375	ENSDARG00000099890	CU207221.2	99	59.375
ENSDARG00000115857	znf1001	98	57.790	ENSDARG00000099917	znf1005	99	57.790
ENSDARG00000115857	znf1001	98	45.161	ENSDARG00000074298	znf1015	78	45.161
ENSDARG00000115857	znf1001	95	45.659	ENSDARG00000104904	si:ch73-221f6.1	61	43.658
ENSDARG00000115857	znf1001	100	57.212	ENSDARG00000100803	zgc:173517	95	62.941
ENSDARG00000115857	znf1001	93	60.643	ENSDARG00000100587	zgc:113886	81	60.643
ENSDARG00000115857	znf1001	100	56.731	ENSDARG00000098248	CABZ01081730.1	95	62.202
ENSDARG00000115857	znf1001	93	56.081	ENSDARG00000110710	CU210890.1	94	56.081
ENSDARG00000115857	znf1001	98	48.276	ENSDARG00000101093	zgc:162971	90	48.276
ENSDARG00000115857	znf1001	93	68.718	ENSDARG00000090740	zmp:0000001003	100	68.718
ENSDARG00000115857	znf1001	99	52.174	ENSDARG00000071714	znf983	93	52.174
ENSDARG00000115857	znf1001	98	47.278	ENSDARG00000105295	LO017784.1	66	47.278
ENSDARG00000115857	znf1001	100	54.087	ENSDARG00000099731	CABZ01066719.1	97	60.417
ENSDARG00000115857	znf1001	100	60.547	ENSDARG00000106565	CABZ01066720.1	96	57.692
ENSDARG00000115857	znf1001	96	55.294	ENSDARG00000096851	znf1143	100	55.294
ENSDARG00000115857	znf1001	97	48.810	ENSDARG00000099986	si:ch211-207i20.2	62	48.810
ENSDARG00000115857	znf1001	93	66.368	ENSDARG00000109703	FO834825.1	84	66.368
ENSDARG00000115857	znf1001	95	42.857	ENSDARG00000058562	znf991	92	42.857
ENSDARG00000115857	znf1001	100	61.340	ENSDARG00000103530	zgc:113102	99	61.340
ENSDARG00000115857	znf1001	93	61.922	ENSDARG00000105056	znf45l	93	55.060
ENSDARG00000115857	znf1001	95	44.516	ENSDARG00000104807	si:ch73-221f6.3	65	44.516
ENSDARG00000115857	znf1001	99	48.747	ENSDARG00000103954	znf1152	94	50.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000115857	znf1001	97	47.024	ENSACIG00000007882	-	78	47.024	Amphilophus_citrinellus
ENSDARG00000115857	znf1001	93	46.429	ENSACIG00000008886	znf1164	81	46.429	Amphilophus_citrinellus
ENSDARG00000115857	znf1001	94	46.245	ENSACIG00000000360	si:ch211-241b2.1	88	46.245	Amphilophus_citrinellus
ENSDARG00000115857	znf1001	93	43.182	ENSACLG00000017449	-	59	43.182	Astatotilapia_calliptera
ENSDARG00000115857	znf1001	93	50.990	ENSAMXG00000029660	-	56	50.990	Astyanax_mexicanus
ENSDARG00000115857	znf1001	94	54.237	ENSAMXG00000043291	-	68	54.237	Astyanax_mexicanus
ENSDARG00000115857	znf1001	97	43.226	ENSEBUG00000015073	-	82	41.587	Eptatretus_burgeri
ENSDARG00000115857	znf1001	93	43.694	ENSFHEG00000013152	-	65	43.694	Fundulus_heteroclitus
ENSDARG00000115857	znf1001	93	48.500	ENSFHEG00000018009	-	51	48.500	Fundulus_heteroclitus
ENSDARG00000115857	znf1001	93	52.174	ENSHBUG00000018916	-	61	49.545	Haplochromis_burtoni
ENSDARG00000115857	znf1001	99	45.701	ENSKMAG00000009563	-	75	50.794	Kryptolebias_marmoratus
ENSDARG00000115857	znf1001	94	50.350	ENSMZEG00005025729	-	88	50.350	Maylandia_zebra
ENSDARG00000115857	znf1001	95	50.515	ENSMZEG00005026470	-	62	50.515	Maylandia_zebra
ENSDARG00000115857	znf1001	93	42.177	ENSMZEG00005025568	-	80	42.177	Maylandia_zebra
ENSDARG00000115857	znf1001	93	52.727	ENSMZEG00005007426	-	64	52.727	Maylandia_zebra
ENSDARG00000115857	znf1001	93	47.273	ENSMZEG00005005162	-	84	47.273	Maylandia_zebra
ENSDARG00000115857	znf1001	94	40.870	ENSMZEG00005022161	-	95	40.870	Maylandia_zebra
ENSDARG00000115857	znf1001	99	47.907	ENSMZEG00005027943	-	96	51.701	Maylandia_zebra
ENSDARG00000115857	znf1001	100	44.872	ENSMZEG00005021426	-	78	44.872	Maylandia_zebra
ENSDARG00000115857	znf1001	95	52.193	ENSMZEG00005027793	-	77	52.193	Maylandia_zebra
ENSDARG00000115857	znf1001	96	52.941	ENSMALG00000010962	-	61	52.941	Monopterus_albus
ENSDARG00000115857	znf1001	94	42.545	ENSMALG00000018074	-	61	43.189	Monopterus_albus
ENSDARG00000115857	znf1001	93	37.727	ENSMALG00000008638	-	64	37.727	Monopterus_albus
ENSDARG00000115857	znf1001	97	48.016	ENSNBRG00000000577	-	77	48.016	Neolamprologus_brichardi
ENSDARG00000115857	znf1001	97	43.636	ENSONIG00000013908	-	100	43.636	Oreochromis_niloticus
ENSDARG00000115857	znf1001	93	39.855	ENSONIG00000006585	-	100	36.943	Oreochromis_niloticus
ENSDARG00000115857	znf1001	93	41.954	ENSONIG00000003363	-	100	40.234	Oreochromis_niloticus
ENSDARG00000115857	znf1001	94	50.000	ENSORLG00020019341	-	81	61.905	Oryzias_latipes_hni
ENSDARG00000115857	znf1001	93	49.270	ENSPKIG00000019848	-	50	48.913	Paramormyrops_kingsleyae
ENSDARG00000115857	znf1001	94	44.444	ENSPMGG00000001558	znf1174	83	38.150	Periophthalmus_magnuspinnatus
ENSDARG00000115857	znf1001	94	47.368	ENSPFOG00000001144	-	100	45.736	Poecilia_formosa
ENSDARG00000115857	znf1001	97	46.643	ENSPLAG00000016561	zgc:113348	90	44.792	Poecilia_latipinna
ENSDARG00000115857	znf1001	93	45.635	ENSPMEG00000007573	zgc:113343	63	45.635	Poecilia_mexicana
ENSDARG00000115857	znf1001	98	46.087	ENSPREG00000014105	-	82	46.087	Poecilia_reticulata
ENSDARG00000115857	znf1001	93	45.238	ENSPREG00000001514	zgc:113343	63	45.238	Poecilia_reticulata
ENSDARG00000115857	znf1001	88	41.611	ENSPNYG00000024183	zgc:173577	99	41.611	Pundamilia_nyererei
ENSDARG00000115857	znf1001	98	40.936	ENSSPAG00000009426	-	66	40.936	Stegastes_partitus
ENSDARG00000115857	znf1001	93	41.629	ENSSPAG00000006539	-	97	41.629	Stegastes_partitus
ENSDARG00000115857	znf1001	95	49.153	ENSTNIG00000000277	-	94	49.153	Tetraodon_nigroviridis
ENSDARG00000115857	znf1001	99	45.238	ENSXCOG00000017871	zgc:113343	76	45.238	Xiphophorus_couchianus
ENSDARG00000115857	znf1001	97	45.238	ENSXMAG00000019923	zgc:113343	65	45.238	Xiphophorus_maculatus