EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000115891 (Gene tree)
Gene ID: -
Gene Symbol: CR533578.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5294 bases
Position: chr16:23466094-23471387
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000149264	RVT_1	PF00078.27	1.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000180899	CR533578.1-201	5294	-	ENSDARP00000149264	1463 (aa)	-	A0A2R8RNF4

Gene Model

Click here to download ENSDARG00000115891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000115891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000115891	CR533578.1	97	46.491	ENSDARG00000114583	BX890543.1	98	46.769
ENSDARG00000115891	CR533578.1	99	54.189	ENSDARG00000112601	FO704673.1	99	54.725
ENSDARG00000115891	CR533578.1	91	48.710	ENSDARG00000116402	CR925755.2	99	47.801
ENSDARG00000115891	CR533578.1	96	47.265	ENSDARG00000099359	CR855320.1	98	47.458
ENSDARG00000115891	CR533578.1	96	47.116	ENSDARG00000113678	BX511082.1	99	47.306
ENSDARG00000115891	CR533578.1	100	63.315	ENSDARG00000116832	CR749164.1	100	63.383
ENSDARG00000115891	CR533578.1	100	99.385	ENSDARG00000114395	CU929458.1	100	99.385
ENSDARG00000115891	CR533578.1	96	47.310	ENSDARG00000113243	BX511224.1	99	47.500
ENSDARG00000115891	CR533578.1	61	99.324	ENSDARG00000101547	CR354395.1	100	99.324
ENSDARG00000115891	CR533578.1	100	99.180	ENSDARG00000111789	BX571665.1	100	99.180
ENSDARG00000115891	CR533578.1	89	47.651	ENSDARG00000086495	BX546500.1	98	47.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000115891	CR533578.1	55	33.906	ENSAPEG00000002424	-	58	33.906	Amphiprion_percula
ENSDARG00000115891	CR533578.1	54	41.063	ENSATEG00000018698	-	70	41.063	Anabas_testudineus
ENSDARG00000115891	CR533578.1	51	34.136	ENSACLG00000018454	-	66	33.917	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	52	31.130	ENSACLG00000001555	-	51	31.130	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	51	37.415	ENSACLG00000004344	-	51	37.415	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	53	31.303	ENSACLG00000020048	-	55	31.303	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	51	36.807	ENSACLG00000000384	-	51	36.807	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	55	34.071	ENSACLG00000020275	-	50	34.071	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	53	36.425	ENSACLG00000013455	-	55	36.425	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	56	31.710	ENSACLG00000016581	-	78	31.710	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	53	42.069	ENSACLG00000027747	-	53	42.069	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	50	32.952	ENSACLG00000021546	-	50	32.952	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	56	30.562	ENSACLG00000027627	-	74	30.562	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	50	34.180	ENSACLG00000021770	-	51	34.180	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	53	35.022	ENSACLG00000002182	-	58	35.520	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	53	36.425	ENSACLG00000003361	-	55	36.425	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	52	30.917	ENSACLG00000013171	-	52	30.917	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	53	35.022	ENSACLG00000019658	-	58	35.520	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	55	39.683	ENSACLG00000013947	-	74	39.683	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	57	42.282	ENSACLG00000003852	-	57	42.282	Astatotilapia_calliptera
ENSDARG00000115891	CR533578.1	64	50.820	ENSAMXG00000042699	-	88	51.070	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	54	30.093	ENSAMXG00000039114	-	85	30.093	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	87	30.074	ENSAMXG00000029230	-	86	30.074	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	56	34.519	ENSAMXG00000032559	-	74	34.519	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	57	32.618	ENSAMXG00000043385	-	70	32.618	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	51	42.247	ENSAMXG00000033912	-	63	42.247	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	52	31.724	ENSAMXG00000039912	-	50	31.724	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	51	31.579	ENSAMXG00000036680	-	52	30.882	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	50	34.028	ENSAMXG00000035138	-	50	34.028	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	50	33.700	ENSAMXG00000038531	-	60	33.700	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	52	31.684	ENSAMXG00000038338	-	63	31.684	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	90	57.820	ENSAMXG00000040915	-	90	48.996	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	68	51.562	ENSAMXG00000041694	-	99	51.900	Astyanax_mexicanus
ENSDARG00000115891	CR533578.1	62	41.573	ENSGAFG00000016760	-	53	41.573	Gambusia_affinis
ENSDARG00000115891	CR533578.1	54	33.597	ENSKMAG00000010491	-	62	33.597	Kryptolebias_marmoratus
ENSDARG00000115891	CR533578.1	61	45.344	ENSKMAG00000007139	-	69	45.344	Kryptolebias_marmoratus
ENSDARG00000115891	CR533578.1	54	33.597	ENSKMAG00000003018	-	62	33.597	Kryptolebias_marmoratus
ENSDARG00000115891	CR533578.1	54	33.597	ENSKMAG00000022204	-	62	33.597	Kryptolebias_marmoratus
ENSDARG00000115891	CR533578.1	54	32.378	ENSLACG00000003991	-	95	32.378	Latimeria_chalumnae
ENSDARG00000115891	CR533578.1	50	38.565	ENSMALG00000020759	-	56	38.565	Monopterus_albus
ENSDARG00000115891	CR533578.1	52	37.130	ENSORLG00000029435	-	55	37.130	Oryzias_latipes
ENSDARG00000115891	CR533578.1	58	39.549	ENSORLG00000023550	-	62	41.966	Oryzias_latipes
ENSDARG00000115891	CR533578.1	57	34.146	ENSORLG00000028547	-	55	34.146	Oryzias_latipes
ENSDARG00000115891	CR533578.1	55	33.718	ENSORLG00000022290	-	56	33.718	Oryzias_latipes
ENSDARG00000115891	CR533578.1	55	36.629	ENSORLG00000027117	-	51	36.629	Oryzias_latipes
ENSDARG00000115891	CR533578.1	89	53.352	ENSORLG00000027396	-	96	53.056	Oryzias_latipes
ENSDARG00000115891	CR533578.1	57	34.146	ENSORLG00000030569	-	55	34.146	Oryzias_latipes
ENSDARG00000115891	CR533578.1	56	34.646	ENSORLG00000025132	-	67	34.646	Oryzias_latipes
ENSDARG00000115891	CR533578.1	53	35.648	ENSORLG00000027538	-	55	34.874	Oryzias_latipes
ENSDARG00000115891	CR533578.1	53	42.553	ENSORLG00000022054	-	54	43.026	Oryzias_latipes
ENSDARG00000115891	CR533578.1	52	37.358	ENSORLG00020022538	-	55	37.358	Oryzias_latipes_hni
ENSDARG00000115891	CR533578.1	58	31.031	ENSORLG00020016398	-	72	30.895	Oryzias_latipes_hni
ENSDARG00000115891	CR533578.1	54	33.180	ENSORLG00020013085	-	51	33.180	Oryzias_latipes_hni
ENSDARG00000115891	CR533578.1	53	37.981	ENSORLG00020016001	-	60	37.981	Oryzias_latipes_hni
ENSDARG00000115891	CR533578.1	67	42.224	ENSORLG00020019993	-	99	42.028	Oryzias_latipes_hni
ENSDARG00000115891	CR533578.1	50	37.556	ENSORLG00020007648	-	63	37.556	Oryzias_latipes_hni
ENSDARG00000115891	CR533578.1	52	37.358	ENSORLG00015017494	-	64	37.358	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	51	38.369	ENSORLG00015000130	-	66	38.369	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	55	32.196	ENSORLG00015022011	-	80	32.196	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	54	32.949	ENSORLG00015018293	-	54	32.949	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	50	37.556	ENSORLG00015012565	-	69	37.556	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	52	42.640	ENSORLG00015008388	-	79	42.640	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	66	42.463	ENSORLG00015020336	-	99	42.463	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	57	33.943	ENSORLG00015013242	-	56	33.943	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	66	42.462	ENSORLG00015015202	-	82	42.462	Oryzias_latipes_hsok
ENSDARG00000115891	CR533578.1	56	33.073	ENSOMEG00000009707	-	69	33.073	Oryzias_melastigma
ENSDARG00000115891	CR533578.1	52	43.080	ENSOMEG00000012350	-	54	43.080	Oryzias_melastigma
ENSDARG00000115891	CR533578.1	56	33.295	ENSOMEG00000011191	-	60	33.411	Oryzias_melastigma
ENSDARG00000115891	CR533578.1	50	36.117	ENSOMEG00000021861	-	50	36.117	Oryzias_melastigma
ENSDARG00000115891	CR533578.1	55	37.642	ENSPKIG00000000869	-	51	37.642	Paramormyrops_kingsleyae
ENSDARG00000115891	CR533578.1	54	33.867	ENSPKIG00000012188	-	59	33.867	Paramormyrops_kingsleyae
ENSDARG00000115891	CR533578.1	52	37.011	ENSPKIG00000010959	-	50	37.011	Paramormyrops_kingsleyae
ENSDARG00000115891	CR533578.1	55	34.685	ENSPKIG00000023888	-	53	34.685	Paramormyrops_kingsleyae
ENSDARG00000115891	CR533578.1	54	38.428	ENSPKIG00000007924	-	84	38.428	Paramormyrops_kingsleyae
ENSDARG00000115891	CR533578.1	51	37.844	ENSPKIG00000020388	-	60	37.844	Paramormyrops_kingsleyae
ENSDARG00000115891	CR533578.1	63	35.390	ENSPKIG00000013293	-	83	35.390	Paramormyrops_kingsleyae
ENSDARG00000115891	CR533578.1	55	31.803	ENSPMEG00000023031	-	82	31.803	Poecilia_mexicana
ENSDARG00000115891	CR533578.1	50	31.640	ENSPMEG00000002683	-	50	31.640	Poecilia_mexicana
ENSDARG00000115891	CR533578.1	50	41.573	ENSPREG00000004621	-	51	41.573	Poecilia_reticulata
ENSDARG00000115891	CR533578.1	51	35.172	ENSPREG00000005134	-	61	35.172	Poecilia_reticulata
ENSDARG00000115891	CR533578.1	55	39.019	ENSPNAG00000015770	-	65	39.019	Pygocentrus_nattereri
ENSDARG00000115891	CR533578.1	53	35.597	ENSPNAG00000017165	-	53	35.597	Pygocentrus_nattereri
ENSDARG00000115891	CR533578.1	55	40.700	ENSSDUG00000010009	-	80	40.700	Seriola_dumerili
ENSDARG00000115891	CR533578.1	52	37.864	ENSSLDG00000003503	-	73	37.864	Seriola_lalandi_dorsalis
ENSDARG00000115891	CR533578.1	52	40.977	ENSSLDG00000001005	-	59	40.977	Seriola_lalandi_dorsalis
ENSDARG00000115891	CR533578.1	56	32.288	ENSXMAG00000023331	-	55	32.288	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	50	33.718	ENSXMAG00000023476	-	50	33.718	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	53	31.770	ENSXMAG00000021440	-	62	31.770	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	53	35.892	ENSXMAG00000021254	-	56	35.892	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	59	31.861	ENSXMAG00000026865	-	66	32.468	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	52	34.707	ENSXMAG00000023536	-	53	34.707	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	54	42.553	ENSXMAG00000021686	-	60	42.553	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	58	31.311	ENSXMAG00000021174	-	72	31.608	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	53	31.410	ENSXMAG00000025715	-	53	31.410	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	52	34.707	ENSXMAG00000029413	-	53	34.707	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	51	40.618	ENSXMAG00000022159	-	69	31.310	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	50	33.718	ENSXMAG00000022790	-	50	33.718	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	52	32.671	ENSXMAG00000022795	-	52	32.671	Xiphophorus_maculatus
ENSDARG00000115891	CR533578.1	54	42.553	ENSXMAG00000024126	-	60	42.553	Xiphophorus_maculatus