EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000116389 (Gene tree)
Gene ID: -
Gene Symbol: CR450764.8
Alias: -
Full Name: E3 ubiquitin-protein ligase RBBP6-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 9214 bases
Position: chr11:12610576-12619789
Accession: 103908740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000145422	zf-CCHC_2	PF13696.6	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000185508	CR450764.8-201	834	XM_009305913	ENSDARP00000145422	277 (aa)	XP_009304188	A0A2R8Q3M0

Gene Model

Click here to download ENSDARG00000116389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000116389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000116389	CR450764.8	100	97.122	ENSDARG00000094335	si:dkey-23f9.12	100	97.122
ENSDARG00000116389	CR450764.8	100	97.122	ENSDARG00000070812	si:ch211-156l18.6	100	97.122
ENSDARG00000116389	CR450764.8	100	98.201	ENSDARG00000115079	zgc:174353	100	98.201
ENSDARG00000116389	CR450764.8	100	95.307	ENSDARG00000094196	si:dkey-27d5.10	100	95.307
ENSDARG00000116389	CR450764.8	100	97.482	ENSDARG00000113994	zgc:174354	100	97.482
ENSDARG00000116389	CR450764.8	100	97.842	ENSDARG00000111826	zgc:174354	100	97.842
ENSDARG00000116389	CR450764.8	100	98.201	ENSDARG00000110591	si:dkey-27d5.6	100	98.201
ENSDARG00000116389	CR450764.8	100	99.278	ENSDARG00000113889	zgc:174355	100	99.278
ENSDARG00000116389	CR450764.8	100	98.201	ENSDARG00000100754	CR450764.1	100	98.201
ENSDARG00000116389	CR450764.8	100	97.482	ENSDARG00000112365	zgc:174353	100	97.482
ENSDARG00000116389	CR450764.8	100	97.842	ENSDARG00000088552	si:dkey-23f9.13	100	97.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000116389	CR450764.8	81	35.319	WBGene00009477	rbpl-1	51	31.053	Caenorhabditis_elegans
ENSDARG00000116389	CR450764.8	71	36.283	ENSCING00000017248	-	99	34.483	Ciona_intestinalis
ENSDARG00000116389	CR450764.8	69	37.264	ENSCSAVG00000002639	-	100	37.264	Ciona_savignyi
ENSDARG00000116389	CR450764.8	57	45.860	ENSELUG00000017972	-	59	47.967	Esox_lucius
ENSDARG00000116389	CR450764.8	84	50.424	ENSGMOG00000004819	-	99	50.424	Gadus_morhua
ENSDARG00000116389	CR450764.8	57	44.025	ENSGACG00000016781	-	51	47.154	Gasterosteus_aculeatus
ENSDARG00000116389	CR450764.8	80	38.683	ENSLBEG00000021906	-	100	40.167	Labrus_bergylta
ENSDARG00000116389	CR450764.8	51	49.645	ENSONIG00000015704	-	54	51.163	Oreochromis_niloticus
ENSDARG00000116389	CR450764.8	57	44.654	ENSPMGG00000002101	-	53	47.200	Periophthalmus_magnuspinnatus
ENSDARG00000116389	CR450764.8	84	49.789	ENSPFOG00000022154	-	59	49.789	Poecilia_formosa
ENSDARG00000116389	CR450764.8	50	49.286	ENSSMAG00000008324	-	54	52.381	Scophthalmus_maximus
ENSDARG00000116389	CR450764.8	61	42.604	ENSTNIG00000005451	-	60	44.966	Tetraodon_nigroviridis