EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000116712 (Gene tree)
Gene ID: 100006548
Gene Symbol: CABZ01061894.1
Alias: -
Full Name: wu:fb16f03
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 17121 bases
Position: chr15:44646592-44663712
Accession: 100006548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000152393	MA3	PF02847.17	5.3e-26	1	1
ENSDARP00000152393	W2	PF02020.18	4.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000192124	CABZ01061894.1-201	1287	XM_017351287	ENSDARP00000152393	428 (aa)	XP_017206776	A0A2R8QH90

Gene Model

Click here to download ENSDARG00000116712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000116712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000116712	CABZ01061894.1	86	56.499	ENSDARG00000077215	eif4g3a	97	53.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000116712	CABZ01061894.1	86	67.380	ENSG00000114867	EIF4G1	92	59.880	Homo_sapiens
ENSDARG00000116712	CABZ01061894.1	84	77.686	ENSACIG00000020879	EIF4G1	60	77.808	Amphilophus_citrinellus
ENSDARG00000116712	CABZ01061894.1	87	72.032	ENSCSEG00000016729	-	58	72.603	Cynoglossus_semilaevis
ENSDARG00000116712	CABZ01061894.1	86	61.930	ENSHGLG00000008713	-	55	62.637	Heterocephalus_glaber_female
ENSDARG00000116712	CABZ01061894.1	88	70.866	ENSHCOG00000016075	EIF4G1	61	71.311	Hippocampus_comes
ENSDARG00000116712	CABZ01061894.1	84	73.151	ENSLBEG00000018553	-	60	73.352	Labrus_bergylta
ENSDARG00000116712	CABZ01061894.1	87	71.277	ENSMMOG00000018909	-	57	72.527	Mola_mola
ENSDARG00000116712	CABZ01061894.1	91	69.367	ENSMMOG00000018912	-	57	73.901	Mola_mola
ENSDARG00000116712	CABZ01061894.1	84	77.869	ENSMALG00000021564	EIF4G1	60	77.869	Monopterus_albus
ENSDARG00000116712	CABZ01061894.1	79	67.347	ENSPSIG00000016626	-	100	67.347	Pelodiscus_sinensis
ENSDARG00000116712	CABZ01061894.1	84	74.521	ENSPMGG00000014145	-	58	74.451	Periophthalmus_magnuspinnatus
ENSDARG00000116712	CABZ01061894.1	86	66.043	ENSPREG00000003139	-	53	66.485	Poecilia_reticulata
ENSDARG00000116712	CABZ01061894.1	84	72.329	ENSPNAG00000018237	eif4g1a	56	72.329	Pygocentrus_nattereri
ENSDARG00000116712	CABZ01061894.1	86	65.684	ENSRNOG00000049598	LOC100912571	68	66.209	Rattus_norvegicus
ENSDARG00000116712	CABZ01061894.1	86	66.845	ENSRROG00000004376	EIF4G1	57	61.804	Rhinopithecus_roxellana
ENSDARG00000116712	CABZ01061894.1	84	73.224	ENSSMAG00000000192	-	51	67.036	Scophthalmus_maximus
ENSDARG00000116712	CABZ01061894.1	84	75.069	ENSSPAG00000021450	-	66	75.069	Stegastes_partitus
ENSDARG00000116712	CABZ01061894.1	86	62.599	ENSTRUG00000011275	-	54	62.534	Takifugu_rubripes
ENSDARG00000116712	CABZ01061894.1	84	72.652	ENSTRUG00000005806	-	65	72.576	Takifugu_rubripes
ENSDARG00000116712	CABZ01061894.1	86	69.892	ENSXCOG00000014587	-	56	59.946	Xiphophorus_couchianus