EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000116765 (Gene tree)
Gene ID: 798203
Gene Symbol: zgc:162962
Alias: -
Full Name: zgc:162962
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5761 bases
Position: chr15:44250335-44256095
Accession: ZDB-GENE-070424-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	1	9
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	2	9
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	3	9
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	4	9
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	5	9
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	6	9
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	7	9
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	8	9
ENSDARP00000151454	zf-C2H2	PF00096.26	7.7e-50	9	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	1	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	2	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	3	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	4	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	5	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	6	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	7	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	8	9
ENSDARP00000153391	zf-C2H2	PF00096.26	7.7e-50	9	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	1	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	2	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	3	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	4	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	5	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	6	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	7	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	8	9
ENSDARP00000148195	zf-C2H2	PF00096.26	9.8e-50	9	9
ENSDARP00000151454	zf-met	PF12874.7	1.7e-10	1	2
ENSDARP00000151454	zf-met	PF12874.7	1.7e-10	2	2
ENSDARP00000153391	zf-met	PF12874.7	1.7e-10	1	2
ENSDARP00000153391	zf-met	PF12874.7	1.7e-10	2	2
ENSDARP00000148195	zf-met	PF12874.7	2.1e-10	1	2
ENSDARP00000148195	zf-met	PF12874.7	2.1e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000186162	-	1378	-	ENSDARP00000151454	347 (aa)	-	A0A2R8RUY8
ENSDART00000180275	-	1442	-	ENSDARP00000153391	347 (aa)	-	A0A2R8RUY8
ENSDART00000193503	-	1379	-	ENSDARP00000148195	354 (aa)	-	A0A2R8Q532

Gene Model

Click here to download ENSDARG00000116765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000116765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000116765	zgc:162962	80	51.799	ENSDARG00000101694	znf1184	95	45.000
ENSDARG00000116765	zgc:162962	73	52.321	ENSDARG00000015482	zgc:113518	93	44.690
ENSDARG00000116765	zgc:162962	96	45.045	ENSDARG00000101093	zgc:162971	99	45.045
ENSDARG00000116765	zgc:162962	80	50.407	ENSDARG00000111506	BX470259.1	96	43.636
ENSDARG00000116765	zgc:162962	99	41.546	ENSDARG00000097928	si:ch73-40a17.4	98	50.549
ENSDARG00000116765	zgc:162962	87	51.282	ENSDARG00000089940	znf1008	95	51.282
ENSDARG00000116765	zgc:162962	94	50.909	ENSDARG00000104798	BX510922.2	96	50.909
ENSDARG00000116765	zgc:162962	97	46.512	ENSDARG00000109703	FO834825.1	99	46.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000116765	zgc:162962	92	46.957	ENSACIG00000000360	si:ch211-241b2.1	98	46.957	Amphilophus_citrinellus
ENSDARG00000116765	zgc:162962	67	44.335	ENSATEG00000008683	si:ch211-241b2.1	72	44.118	Anabas_testudineus
ENSDARG00000116765	zgc:162962	82	41.860	ENSACLG00000000521	-	93	41.860	Astatotilapia_calliptera
ENSDARG00000116765	zgc:162962	93	50.826	ENSAMXG00000043291	-	72	51.477	Astyanax_mexicanus
ENSDARG00000116765	zgc:162962	86	49.738	ENSAMXG00000041650	-	85	49.738	Astyanax_mexicanus
ENSDARG00000116765	zgc:162962	99	45.000	ENSFHEG00000018209	-	99	43.434	Fundulus_heteroclitus
ENSDARG00000116765	zgc:162962	97	46.237	ENSFHEG00000018009	-	60	46.237	Fundulus_heteroclitus
ENSDARG00000116765	zgc:162962	93	40.690	ENSFHEG00000013152	-	73	40.000	Fundulus_heteroclitus
ENSDARG00000116765	zgc:162962	99	45.402	ENSHBUG00000018916	-	61	48.246	Haplochromis_burtoni
ENSDARG00000116765	zgc:162962	94	41.569	ENSKMAG00000009563	-	51	42.268	Kryptolebias_marmoratus
ENSDARG00000116765	zgc:162962	97	40.000	ENSLBEG00000022939	-	67	40.000	Labrus_bergylta
ENSDARG00000116765	zgc:162962	84	41.441	ENSLBEG00000028628	znf1174	51	41.441	Labrus_bergylta
ENSDARG00000116765	zgc:162962	99	49.606	ENSMZEG00005027793	-	79	49.606	Maylandia_zebra
ENSDARG00000116765	zgc:162962	80	49.000	ENSMZEG00005026470	-	58	49.000	Maylandia_zebra
ENSDARG00000116765	zgc:162962	84	44.958	ENSMZEG00005021426	-	84	44.958	Maylandia_zebra
ENSDARG00000116765	zgc:162962	91	37.857	ENSMZEG00005022161	-	79	38.819	Maylandia_zebra
ENSDARG00000116765	zgc:162962	98	48.276	ENSMZEG00005007426	-	65	48.684	Maylandia_zebra
ENSDARG00000116765	zgc:162962	91	45.333	ENSMZEG00005025729	-	99	45.536	Maylandia_zebra
ENSDARG00000116765	zgc:162962	98	47.619	ENSMZEG00005027943	-	96	46.637	Maylandia_zebra
ENSDARG00000116765	zgc:162962	87	40.976	ENSMZEG00005005162	-	70	42.714	Maylandia_zebra
ENSDARG00000116765	zgc:162962	81	37.884	ENSMALG00000008638	-	50	39.179	Monopterus_albus
ENSDARG00000116765	zgc:162962	98	46.063	ENSNBRG00000000577	-	90	49.194	Neolamprologus_brichardi
ENSDARG00000116765	zgc:162962	83	42.731	ENSONIG00000013908	-	100	48.718	Oreochromis_niloticus
ENSDARG00000116765	zgc:162962	82	40.084	ENSONIG00000006585	-	97	40.084	Oreochromis_niloticus
ENSDARG00000116765	zgc:162962	98	46.667	ENSPKIG00000019848	-	58	46.667	Paramormyrops_kingsleyae
ENSDARG00000116765	zgc:162962	96	43.284	ENSPLAG00000016561	zgc:113348	96	40.000	Poecilia_latipinna
ENSDARG00000116765	zgc:162962	96	32.000	ENSPREG00000005538	-	85	32.000	Poecilia_reticulata
ENSDARG00000116765	zgc:162962	88	43.421	ENSSPAG00000006539	-	90	43.172	Stegastes_partitus
ENSDARG00000116765	zgc:162962	83	37.931	ENSSPAG00000009426	-	63	41.284	Stegastes_partitus
ENSDARG00000116765	zgc:162962	97	41.045	ENSXMAG00000019923	zgc:113343	69	43.382	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function