EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000116814 (Gene tree)
Gene ID: -
Gene Symbol: CU570894.2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 177284 bases
Position: chr22:2473222-2650505
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000154422	zf-C2H2	PF00096.26	1.9e-47	1	8
ENSDARP00000154422	zf-C2H2	PF00096.26	1.9e-47	2	8
ENSDARP00000154422	zf-C2H2	PF00096.26	1.9e-47	3	8
ENSDARP00000154422	zf-C2H2	PF00096.26	1.9e-47	4	8
ENSDARP00000154422	zf-C2H2	PF00096.26	1.9e-47	5	8
ENSDARP00000154422	zf-C2H2	PF00096.26	1.9e-47	6	8
ENSDARP00000154422	zf-C2H2	PF00096.26	1.9e-47	7	8
ENSDARP00000154422	zf-C2H2	PF00096.26	1.9e-47	8	8
ENSDARP00000151753	zf-C2H2	PF00096.26	5.4e-30	1	5
ENSDARP00000151753	zf-C2H2	PF00096.26	5.4e-30	2	5
ENSDARP00000151753	zf-C2H2	PF00096.26	5.4e-30	3	5
ENSDARP00000151753	zf-C2H2	PF00096.26	5.4e-30	4	5
ENSDARP00000151753	zf-C2H2	PF00096.26	5.4e-30	5	5
ENSDARP00000154422	zf-met	PF12874.7	6.2e-14	1	4
ENSDARP00000154422	zf-met	PF12874.7	6.2e-14	2	4
ENSDARP00000154422	zf-met	PF12874.7	6.2e-14	3	4
ENSDARP00000154422	zf-met	PF12874.7	6.2e-14	4	4
ENSDARP00000151753	zf-met	PF12874.7	3e-08	1	2
ENSDARP00000151753	zf-met	PF12874.7	3e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000192179	CU570894.2-201	5899	-	ENSDARP00000154422	298 (aa)	-	A0A2R8QJP0
ENSDART00000181596	CU570894.2-202	5461	-	ENSDARP00000151753	228 (aa)	-	A0A2R8QAZ1

Gene Model

Click here to download ENSDARG00000116814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000116814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000116814	CU570894.2	99	58.209	ENSDARG00000103827	znf1144	98	70.370
ENSDARG00000116814	CU570894.2	71	53.307	ENSDARG00000106808	CU856622.1	99	49.259
ENSDARG00000116814	CU570894.2	99	65.263	ENSDARG00000053165	zgc:113377	81	54.483
ENSDARG00000116814	CU570894.2	99	58.079	ENSDARG00000103954	znf1152	93	54.502
ENSDARG00000116814	CU570894.2	99	58.421	ENSDARG00000098021	si:dkey-111k8.2	86	51.877
ENSDARG00000116814	CU570894.2	99	51.133	ENSDARG00000099618	si:dkey-1b17.6	99	51.133
ENSDARG00000116814	CU570894.2	99	54.348	ENSDARG00000113011	zgc:113102	92	53.968
ENSDARG00000116814	CU570894.2	99	60.000	ENSDARG00000105056	znf45l	90	52.595
ENSDARG00000116814	CU570894.2	100	56.618	ENSDARG00000104065	znf1154	80	48.148
ENSDARG00000116814	CU570894.2	99	51.156	ENSDARG00000014775	zgc:113220	92	55.814
ENSDARG00000116814	CU570894.2	99	62.791	ENSDARG00000078159	zgc:175284	100	62.791
ENSDARG00000116814	CU570894.2	99	48.958	ENSDARG00000099172	BX000701.1	99	48.958
ENSDARG00000116814	CU570894.2	99	52.174	ENSDARG00000111899	zgc:171435	89	52.174
ENSDARG00000116814	CU570894.2	99	56.364	ENSDARG00000078281	zgc:173575	83	51.504
ENSDARG00000116814	CU570894.2	87	58.854	ENSDARG00000103530	zgc:113102	88	50.000
ENSDARG00000116814	CU570894.2	99	56.842	ENSDARG00000100587	zgc:113886	82	53.061
ENSDARG00000116814	CU570894.2	99	50.338	ENSDARG00000099731	CABZ01066719.1	94	50.000
ENSDARG00000116814	CU570894.2	98	50.718	ENSDARG00000100915	si:ch211-255f4.7	99	50.718
ENSDARG00000116814	CU570894.2	100	55.729	ENSDARG00000092605	znf1003	79	47.426
ENSDARG00000116814	CU570894.2	100	53.158	ENSDARG00000088507	znf982	92	57.500
ENSDARG00000116814	CU570894.2	99	42.215	ENSDARG00000102959	zgc:171220	90	42.215
ENSDARG00000116814	CU570894.2	91	58.642	ENSDARG00000115737	AL954741.2	99	50.385
ENSDARG00000116814	CU570894.2	99	42.105	ENSDARG00000071589	si:dkey-253d23.2	97	46.667
ENSDARG00000116814	CU570894.2	99	50.000	ENSDARG00000102411	CR847850.1	95	50.000
ENSDARG00000116814	CU570894.2	88	53.478	ENSDARG00000101044	si:ch73-138e16.6	96	53.478
ENSDARG00000116814	CU570894.2	99	53.670	ENSDARG00000093378	si:ch211-235i11.5	85	52.203
ENSDARG00000116814	CU570894.2	87	51.462	ENSDARG00000098923	zgc:173577	90	52.941
ENSDARG00000116814	CU570894.2	99	48.496	ENSDARG00000098898	si:ch211-255f4.2	99	48.496
ENSDARG00000116814	CU570894.2	99	47.635	ENSDARG00000095704	si:dkey-4c15.13	95	74.074
ENSDARG00000116814	CU570894.2	99	58.929	ENSDARG00000077712	zgc:113886	100	58.929
ENSDARG00000116814	CU570894.2	99	53.737	ENSDARG00000071833	znf1162	100	55.682
ENSDARG00000116814	CU570894.2	99	48.438	ENSDARG00000078814	si:dkey-34m19.3	75	59.140
ENSDARG00000116814	CU570894.2	99	52.878	ENSDARG00000109703	FO834825.1	98	55.789
ENSDARG00000116814	CU570894.2	99	53.199	ENSDARG00000097521	si:dkey-111k8.5	89	53.199
ENSDARG00000116814	CU570894.2	99	80.556	ENSDARG00000103777	znf1001	99	80.556
ENSDARG00000116814	CU570894.2	84	57.222	ENSDARG00000073821	znf1177	77	57.222
ENSDARG00000116814	CU570894.2	99	61.290	ENSDARG00000094736	znf1157	83	77.586
ENSDARG00000116814	CU570894.2	99	59.420	ENSDARG00000090740	zmp:0000001003	100	59.420
ENSDARG00000116814	CU570894.2	100	55.102	ENSDARG00000100544	zgc:173486	97	65.333
ENSDARG00000116814	CU570894.2	84	56.995	ENSDARG00000106565	CABZ01066720.1	91	56.995
ENSDARG00000116814	CU570894.2	99	43.919	ENSDARG00000098613	si:dkey-15h8.16	74	43.919

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000116814	CU570894.2	99	43.810	ENSACIG00000009755	-	86	43.636	Amphilophus_citrinellus
ENSDARG00000116814	CU570894.2	98	52.033	ENSLOCG00000000714	-	88	48.639	Lepisosteus_oculatus