EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000117086 (Gene tree)
Gene ID: -
Gene Symbol: CABZ01090544.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4217 bases
Position: chrKZ115966.1:4009-8225
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000147064	GTP_EFTU	PF00009.27	3.5e-19	1	1
ENSDARP00000151570	GTP_EFTU	PF00009.27	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000191381	CABZ01090544.1-201	183	-	ENSDARP00000151570	60 (aa)	-	A0A2R8QAL2
ENSDART00000183659	CABZ01090544.1-202	294	-	ENSDARP00000147064	97 (aa)	-	A0A2R8Q0D5

Gene Model

Click here to download ENSDARG00000117086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000117086's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000117086	CABZ01090544.1	90	81.481	ENSG00000140598	EFL1	93	81.481	Homo_sapiens
ENSDARG00000117086	CABZ01090544.1	85	91.463	ENSAOCG00000024337	-	86	91.463	Amphiprion_ocellaris
ENSDARG00000117086	CABZ01090544.1	98	77.966	ENSCJAG00000015607	-	66	77.966	Callithrix_jacchus
ENSDARG00000117086	CABZ01090544.1	90	81.481	ENSCAFG00020015837	-	79	84.416	Canis_lupus_dingo
ENSDARG00000117086	CABZ01090544.1	90	79.630	ENSCCAG00000034450	EFL1	74	81.132	Cebus_capucinus
ENSDARG00000117086	CABZ01090544.1	90	77.778	ENSCLAG00000010155	EFL1	94	74.444	Chinchilla_lanigera
ENSDARG00000117086	CABZ01090544.1	68	87.879	ENSCHOG00000004666	-	56	87.879	Choloepus_hoffmanni
ENSDARG00000117086	CABZ01090544.1	90	79.630	ENSFDAG00000009023	EFL1	84	82.278	Fukomys_damarensis
ENSDARG00000117086	CABZ01090544.1	90	72.222	ENSGALG00000006225	EFL1	75	82.895	Gallus_gallus
ENSDARG00000117086	CABZ01090544.1	90	75.926	ENSGAFG00000004687	-	81	84.810	Gambusia_affinis
ENSDARG00000117086	CABZ01090544.1	90	75.926	ENSGGOG00000008894	-	58	75.926	Gorilla_gorilla
ENSDARG00000117086	CABZ01090544.1	90	79.630	ENSHGLG00000011798	EFL1	64	80.247	Heterocephalus_glaber_female
ENSDARG00000117086	CABZ01090544.1	90	79.630	ENSHGLG00100010319	EFTUD1	95	82.278	Heterocephalus_glaber_male
ENSDARG00000117086	CABZ01090544.1	90	79.630	ENSSTOG00000022945	EFL1	82	78.824	Ictidomys_tridecemlineatus
ENSDARG00000117086	CABZ01090544.1	92	78.182	ENSSTOG00000030430	-	81	78.409	Ictidomys_tridecemlineatus
ENSDARG00000117086	CABZ01090544.1	90	70.000	ENSLBEG00000009564	-	90	70.000	Labrus_bergylta
ENSDARG00000117086	CABZ01090544.1	93	71.579	ENSMUSG00000038563	Efl1	92	71.579	Mus_musculus
ENSDARG00000117086	CABZ01090544.1	90	81.481	ENSOPRG00000001514	-	94	82.500	Ochotona_princeps
ENSDARG00000117086	CABZ01090544.1	90	79.630	ENSODEG00000016193	EFL1	83	85.714	Octodon_degus
ENSDARG00000117086	CABZ01090544.1	88	82.353	ENSORLG00000029029	-	78	82.353	Oryzias_latipes
ENSDARG00000117086	CABZ01090544.1	95	77.193	ENSPPAG00000027322	-	63	77.193	Pan_paniscus
ENSDARG00000117086	CABZ01090544.1	98	74.576	ENSPTRG00000050545	-	61	74.576	Pan_troglodytes
ENSDARG00000117086	CABZ01090544.1	88	75.472	ENSPPYG00000006744	-	55	75.472	Pongo_abelii
ENSDARG00000117086	CABZ01090544.1	97	75.862	ENSPCAG00000011842	-	61	78.750	Procavia_capensis
ENSDARG00000117086	CABZ01090544.1	90	79.630	ENSUAMG00000022106	EFL1	84	78.313	Ursus_americanus
ENSDARG00000117086	CABZ01090544.1	90	79.630	ENSUMAG00000010303	EFL1	59	80.247	Ursus_maritimus