EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000000051 (Gene tree)
Gene ID: 101443397
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 30224 bases
Position: chrJH579858.1:736331-766554
Accession: 24644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000000036	EST1	PF10374.9	7.2e-24	1	1
ENSDNOP00000000036	EST1_DNA_bind	PF10373.9	5.8e-37	1	2
ENSDNOP00000000036	EST1_DNA_bind	PF10373.9	5.8e-37	2	2
ENSDNOP00000000036	PIN_4	PF13638.6	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000000052	SMG5-201	3039	-	ENSDNOP00000000036	1012 (aa)	-	UPI0003CC1729

Gene Model

Click here to download ENSDNOG00000000051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000000051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000000051	SMG5	92	36.017	ENSDNOG00000039862	-	100	35.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000000051	SMG5	100	91.831	ENSG00000198952	SMG5	100	91.831	Homo_sapiens
ENSDNOG00000000051	SMG5	99	64.631	ENSAPOG00000019690	smg5	99	63.851	Acanthochromis_polyacanthus
ENSDNOG00000000051	SMG5	98	89.225	ENSAMEG00000014458	SMG5	100	88.176	Ailuropoda_melanoleuca
ENSDNOG00000000051	SMG5	99	61.909	ENSACIG00000001353	smg5	99	63.628	Amphilophus_citrinellus
ENSDNOG00000000051	SMG5	98	61.834	ENSAOCG00000019483	smg5	88	78.515	Amphiprion_ocellaris
ENSDNOG00000000051	SMG5	98	63.158	ENSAPEG00000022949	smg5	88	78.249	Amphiprion_percula
ENSDNOG00000000051	SMG5	99	63.408	ENSATEG00000005348	smg5	99	63.593	Anabas_testudineus
ENSDNOG00000000051	SMG5	98	75.122	ENSAPLG00000010263	SMG5	100	74.634	Anas_platyrhynchos
ENSDNOG00000000051	SMG5	100	92.126	ENSANAG00000032899	SMG5	100	92.126	Aotus_nancymaae
ENSDNOG00000000051	SMG5	99	61.969	ENSACLG00000009311	smg5	99	63.102	Astatotilapia_calliptera
ENSDNOG00000000051	SMG5	100	91.043	ENSBTAG00000009435	SMG5	100	91.043	Bos_taurus
ENSDNOG00000000051	SMG5	99	41.867	ENSBTAG00000021747	-	99	41.860	Bos_taurus
ENSDNOG00000000051	SMG5	100	91.831	ENSCJAG00000005684	SMG5	100	91.831	Callithrix_jacchus
ENSDNOG00000000051	SMG5	100	90.275	ENSCAFG00000016839	SMG5	100	89.567	Canis_familiaris
ENSDNOG00000000051	SMG5	100	90.275	ENSCAFG00020006061	SMG5	100	89.567	Canis_lupus_dingo
ENSDNOG00000000051	SMG5	99	43.620	ENSCHIG00000006323	-	99	43.068	Capra_hircus
ENSDNOG00000000051	SMG5	100	90.650	ENSCHIG00000007709	SMG5	100	90.650	Capra_hircus
ENSDNOG00000000051	SMG5	100	91.544	ENSTSYG00000004099	SMG5	100	90.462	Carlito_syrichta
ENSDNOG00000000051	SMG5	97	69.278	ENSCAPG00000003631	SMG5	100	70.000	Cavia_aperea
ENSDNOG00000000051	SMG5	100	90.373	ENSCPOG00000015696	SMG5	100	90.079	Cavia_porcellus
ENSDNOG00000000051	SMG5	100	91.732	ENSCCAG00000027409	SMG5	100	91.732	Cebus_capucinus
ENSDNOG00000000051	SMG5	100	91.831	ENSCATG00000030539	SMG5	100	91.831	Cercocebus_atys
ENSDNOG00000000051	SMG5	100	91.159	ENSCLAG00000003983	SMG5	100	91.061	Chinchilla_lanigera
ENSDNOG00000000051	SMG5	100	91.732	ENSCSAG00000002120	SMG5	100	91.732	Chlorocebus_sabaeus
ENSDNOG00000000051	SMG5	54	90.876	ENSCHOG00000008741	-	57	90.876	Choloepus_hoffmanni
ENSDNOG00000000051	SMG5	93	73.790	ENSCPBG00000025848	SMG5	100	74.239	Chrysemys_picta_bellii
ENSDNOG00000000051	SMG5	93	34.391	ENSCING00000008706	-	99	34.458	Ciona_intestinalis
ENSDNOG00000000051	SMG5	100	87.894	ENSCANG00000029208	SMG5	100	87.894	Colobus_angolensis_palliatus
ENSDNOG00000000051	SMG5	100	88.114	ENSCGRG00001006336	Smg5	100	87.917	Cricetulus_griseus_chok1gshd
ENSDNOG00000000051	SMG5	98	88.028	ENSCGRG00000005111	Smg5	100	87.815	Cricetulus_griseus_crigri
ENSDNOG00000000051	SMG5	99	62.598	ENSCSEG00000014220	smg5	99	62.598	Cynoglossus_semilaevis
ENSDNOG00000000051	SMG5	99	57.588	ENSCVAG00000000529	smg5	99	57.767	Cyprinodon_variegatus
ENSDNOG00000000051	SMG5	100	89.686	ENSDORG00000010382	Smg5	100	89.489	Dipodomys_ordii
ENSDNOG00000000051	SMG5	82	97.087	ENSETEG00000010336	SMG5	83	97.087	Echinops_telfairi
ENSDNOG00000000051	SMG5	90	45.687	ENSEBUG00000003739	smg5	98	44.550	Eptatretus_burgeri
ENSDNOG00000000051	SMG5	100	91.535	ENSEASG00005019122	SMG5	100	91.535	Equus_asinus_asinus
ENSDNOG00000000051	SMG5	100	91.535	ENSECAG00000001389	SMG5	100	91.535	Equus_caballus
ENSDNOG00000000051	SMG5	72	98.271	ENSEEUG00000012690	SMG5	74	98.271	Erinaceus_europaeus
ENSDNOG00000000051	SMG5	99	62.006	ENSELUG00000012585	smg5	99	61.813	Esox_lucius
ENSDNOG00000000051	SMG5	100	89.754	ENSFCAG00000011783	SMG5	100	89.086	Felis_catus
ENSDNOG00000000051	SMG5	58	76.127	ENSFALG00000001166	-	99	76.214	Ficedula_albicollis
ENSDNOG00000000051	SMG5	98	89.113	ENSFDAG00000017388	SMG5	100	89.012	Fukomys_damarensis
ENSDNOG00000000051	SMG5	97	59.073	ENSFHEG00000013939	smg5	100	59.334	Fundulus_heteroclitus
ENSDNOG00000000051	SMG5	99	74.349	ENSGALG00000029918	-	100	73.834	Gallus_gallus
ENSDNOG00000000051	SMG5	67	77.778	ENSGAFG00000021691	smg5	86	78.836	Gambusia_affinis
ENSDNOG00000000051	SMG5	100	75.878	ENSGAGG00000016131	SMG5	100	75.214	Gopherus_agassizii
ENSDNOG00000000051	SMG5	100	92.028	ENSGGOG00000010932	SMG5	100	92.028	Gorilla_gorilla
ENSDNOG00000000051	SMG5	99	61.886	ENSHBUG00000008654	smg5	99	62.476	Haplochromis_burtoni
ENSDNOG00000000051	SMG5	100	88.310	ENSHGLG00000019152	SMG5	100	88.507	Heterocephalus_glaber_female
ENSDNOG00000000051	SMG5	90	87.623	ENSHGLG00100015948	SMG5	99	87.842	Heterocephalus_glaber_male
ENSDNOG00000000051	SMG5	82	72.928	ENSHCOG00000010229	smg5	78	80.952	Hippocampus_comes
ENSDNOG00000000051	SMG5	99	59.855	ENSIPUG00000006624	Smg5	99	59.296	Ictalurus_punctatus
ENSDNOG00000000051	SMG5	100	91.535	ENSSTOG00000001780	SMG5	100	91.535	Ictidomys_tridecemlineatus
ENSDNOG00000000051	SMG5	100	88.420	ENSJJAG00000022763	Smg5	100	88.224	Jaculus_jaculus
ENSDNOG00000000051	SMG5	50	58.545	ENSKMAG00000014586	smg5	57	55.538	Kryptolebias_marmoratus
ENSDNOG00000000051	SMG5	99	62.949	ENSLBEG00000002145	smg5	88	79.045	Labrus_bergylta
ENSDNOG00000000051	SMG5	100	61.582	ENSLACG00000010521	SMG5	100	61.582	Latimeria_chalumnae
ENSDNOG00000000051	SMG5	96	71.596	ENSLOCG00000008380	smg5	90	71.564	Lepisosteus_oculatus
ENSDNOG00000000051	SMG5	100	90.256	ENSLAFG00000006241	SMG5	100	90.256	Loxodonta_africana
ENSDNOG00000000051	SMG5	100	91.732	ENSMFAG00000045357	SMG5	100	91.732	Macaca_fascicularis
ENSDNOG00000000051	SMG5	100	91.732	ENSMMUG00000000090	SMG5	100	91.732	Macaca_mulatta
ENSDNOG00000000051	SMG5	100	91.634	ENSMNEG00000044425	SMG5	100	91.634	Macaca_nemestrina
ENSDNOG00000000051	SMG5	100	85.588	ENSMLEG00000041192	SMG5	100	85.588	Mandrillus_leucophaeus
ENSDNOG00000000051	SMG5	99	58.007	ENSMAMG00000010683	smg5	58	56.046	Mastacembelus_armatus
ENSDNOG00000000051	SMG5	55	59.828	ENSMZEG00005016543	smg5	87	60.915	Maylandia_zebra
ENSDNOG00000000051	SMG5	99	61.074	ENSMZEG00005015815	smg5	99	61.818	Maylandia_zebra
ENSDNOG00000000051	SMG5	100	86.837	ENSMAUG00000010381	Smg5	100	86.739	Mesocricetus_auratus
ENSDNOG00000000051	SMG5	100	91.732	ENSMICG00000002257	SMG5	100	91.732	Microcebus_murinus
ENSDNOG00000000051	SMG5	100	86.667	ENSMOCG00000016590	Smg5	100	86.471	Microtus_ochrogaster
ENSDNOG00000000051	SMG5	99	57.053	ENSMMOG00000017199	smg5	99	57.554	Mola_mola
ENSDNOG00000000051	SMG5	73	38.035	ENSMODG00000010675	-	81	37.859	Monodelphis_domestica
ENSDNOG00000000051	SMG5	88	38.213	ENSMODG00000004532	-	80	38.147	Monodelphis_domestica
ENSDNOG00000000051	SMG5	73	39.231	ENSMODG00000004735	-	82	40.000	Monodelphis_domestica
ENSDNOG00000000051	SMG5	87	84.910	ENSMODG00000016901	SMG5	98	85.363	Monodelphis_domestica
ENSDNOG00000000051	SMG5	99	57.308	ENSMALG00000010375	smg5	99	57.703	Monopterus_albus
ENSDNOG00000000051	SMG5	100	88.212	MGP_CAROLIEiJ_G0025163	Smg5	100	98.883	Mus_caroli
ENSDNOG00000000051	SMG5	100	88.212	ENSMUSG00000001415	Smg5	99	98.883	Mus_musculus
ENSDNOG00000000051	SMG5	100	88.027	MGP_PahariEiJ_G0026606	Smg5	100	98.883	Mus_pahari
ENSDNOG00000000051	SMG5	100	88.310	MGP_SPRETEiJ_G0026104	Smg5	100	98.883	Mus_spretus
ENSDNOG00000000051	SMG5	93	88.936	ENSMPUG00000004546	SMG5	100	88.421	Mustela_putorius_furo
ENSDNOG00000000051	SMG5	100	89.530	ENSMLUG00000008518	SMG5	100	89.628	Myotis_lucifugus
ENSDNOG00000000051	SMG5	98	42.843	ENSNGAG00000012101	-	98	42.587	Nannospalax_galili
ENSDNOG00000000051	SMG5	100	89.381	ENSNGAG00000020706	Smg5	100	89.381	Nannospalax_galili
ENSDNOG00000000051	SMG5	97	60.222	ENSNBRG00000004332	smg5	98	61.523	Neolamprologus_brichardi
ENSDNOG00000000051	SMG5	100	91.535	ENSNLEG00000012439	SMG5	100	91.535	Nomascus_leucogenys
ENSDNOG00000000051	SMG5	100	83.677	ENSMEUG00000012834	SMG5	100	84.071	Notamacropus_eugenii
ENSDNOG00000000051	SMG5	100	89.173	ENSOPRG00000009152	SMG5	100	89.173	Ochotona_princeps
ENSDNOG00000000051	SMG5	100	90.551	ENSODEG00000012237	SMG5	100	90.551	Octodon_degus
ENSDNOG00000000051	SMG5	99	57.750	ENSONIG00000008632	smg5	99	58.703	Oreochromis_niloticus
ENSDNOG00000000051	SMG5	98	90.927	ENSOCUG00000012886	SMG5	100	90.927	Oryctolagus_cuniculus
ENSDNOG00000000051	SMG5	99	61.868	ENSORLG00020013127	smg5	99	63.379	Oryzias_latipes_hni
ENSDNOG00000000051	SMG5	99	61.591	ENSORLG00015019014	smg5	99	63.557	Oryzias_latipes_hsok
ENSDNOG00000000051	SMG5	100	90.157	ENSOGAG00000004966	SMG5	100	90.157	Otolemur_garnettii
ENSDNOG00000000051	SMG5	99	42.442	ENSOARG00000011963	-	99	42.591	Ovis_aries
ENSDNOG00000000051	SMG5	100	90.748	ENSOARG00000005778	SMG5	100	90.748	Ovis_aries
ENSDNOG00000000051	SMG5	100	91.634	ENSPPAG00000011996	SMG5	100	91.634	Pan_paniscus
ENSDNOG00000000051	SMG5	98	89.839	ENSPPRG00000011901	SMG5	100	89.113	Panthera_pardus
ENSDNOG00000000051	SMG5	99	81.809	ENSPTIG00000007892	SMG5	98	81.966	Panthera_tigris_altaica
ENSDNOG00000000051	SMG5	100	91.831	ENSPTRG00000049282	-	100	91.831	Pan_troglodytes
ENSDNOG00000000051	SMG5	100	91.831	ENSPTRG00000023925	SMG5	100	91.831	Pan_troglodytes
ENSDNOG00000000051	SMG5	100	91.831	ENSPANG00000011201	SMG5	100	91.831	Papio_anubis
ENSDNOG00000000051	SMG5	99	62.488	ENSPKIG00000009402	smg5	99	63.867	Paramormyrops_kingsleyae
ENSDNOG00000000051	SMG5	98	76.763	ENSPSIG00000015198	SMG5	100	76.167	Pelodiscus_sinensis
ENSDNOG00000000051	SMG5	99	57.982	ENSPMGG00000010465	smg5	99	58.379	Periophthalmus_magnuspinnatus
ENSDNOG00000000051	SMG5	100	88.114	ENSPEMG00000001819	Smg5	100	87.917	Peromyscus_maniculatus_bairdii
ENSDNOG00000000051	SMG5	99	48.502	ENSPMAG00000000410	smg5	99	48.895	Petromyzon_marinus
ENSDNOG00000000051	SMG5	100	85.363	ENSPCIG00000018938	SMG5	100	85.756	Phascolarctos_cinereus
ENSDNOG00000000051	SMG5	93	69.074	ENSPFOG00000010191	smg5	88	78.836	Poecilia_formosa
ENSDNOG00000000051	SMG5	93	69.074	ENSPLAG00000009332	smg5	88	78.836	Poecilia_latipinna
ENSDNOG00000000051	SMG5	93	69.074	ENSPMEG00000014105	smg5	88	78.836	Poecilia_mexicana
ENSDNOG00000000051	SMG5	93	69.074	ENSPREG00000017713	smg5	88	78.836	Poecilia_reticulata
ENSDNOG00000000051	SMG5	100	92.028	ENSPPYG00000000723	SMG5	100	92.028	Pongo_abelii
ENSDNOG00000000051	SMG5	75	96.133	ENSPCAG00000008412	SMG5	81	96.133	Procavia_capensis
ENSDNOG00000000051	SMG5	100	91.732	ENSPCOG00000004741	SMG5	100	91.732	Propithecus_coquereli
ENSDNOG00000000051	SMG5	100	82.307	ENSPVAG00000016748	SMG5	100	82.307	Pteropus_vampyrus
ENSDNOG00000000051	SMG5	99	57.797	ENSPNYG00000013397	smg5	88	65.608	Pundamilia_nyererei
ENSDNOG00000000051	SMG5	100	88.310	ENSRNOG00000019590	Smg5	100	88.114	Rattus_norvegicus
ENSDNOG00000000051	SMG5	100	91.535	ENSRBIG00000027428	SMG5	100	91.535	Rhinopithecus_bieti
ENSDNOG00000000051	SMG5	100	91.437	ENSRROG00000030035	SMG5	100	91.437	Rhinopithecus_roxellana
ENSDNOG00000000051	SMG5	100	91.929	ENSSBOG00000033339	SMG5	100	91.929	Saimiri_boliviensis_boliviensis
ENSDNOG00000000051	SMG5	74	40.054	ENSSHAG00000000561	-	82	40.054	Sarcophilus_harrisii
ENSDNOG00000000051	SMG5	64	38.690	ENSSHAG00000000935	-	73	40.678	Sarcophilus_harrisii
ENSDNOG00000000051	SMG5	99	32.625	ENSSHAG00000009572	-	76	40.642	Sarcophilus_harrisii
ENSDNOG00000000051	SMG5	98	84.284	ENSSHAG00000014163	SMG5	100	84.685	Sarcophilus_harrisii
ENSDNOG00000000051	SMG5	99	63.424	ENSSFOG00015024175	smg5	99	63.204	Scleropages_formosus
ENSDNOG00000000051	SMG5	99	58.119	ENSSMAG00000013059	smg5	99	59.626	Scophthalmus_maximus
ENSDNOG00000000051	SMG5	99	58.070	ENSSDUG00000007122	smg5	92	70.794	Seriola_dumerili
ENSDNOG00000000051	SMG5	99	58.275	ENSSLDG00000011418	smg5	92	71.462	Seriola_lalandi_dorsalis
ENSDNOG00000000051	SMG5	90	76.663	ENSSARG00000012484	SMG5	100	76.663	Sorex_araneus
ENSDNOG00000000051	SMG5	93	73.759	ENSSPUG00000002260	SMG5	100	72.644	Sphenodon_punctatus
ENSDNOG00000000051	SMG5	87	77.105	ENSSPAG00000014266	smg5	88	78.215	Stegastes_partitus
ENSDNOG00000000051	SMG5	100	92.421	ENSSSCG00000006490	-	100	92.421	Sus_scrofa
ENSDNOG00000000051	SMG5	99	71.906	ENSSSCG00000039308	-	100	73.221	Sus_scrofa
ENSDNOG00000000051	SMG5	99	76.756	ENSTGUG00000003748	-	100	76.562	Taeniopygia_guttata
ENSDNOG00000000051	SMG5	99	62.368	ENSTRUG00000012580	smg5	99	62.042	Takifugu_rubripes
ENSDNOG00000000051	SMG5	99	62.512	ENSTNIG00000010303	smg5	99	62.536	Tetraodon_nigroviridis
ENSDNOG00000000051	SMG5	60	100.000	ENSTBEG00000002777	SMG5	60	100.000	Tupaia_belangeri
ENSDNOG00000000051	SMG5	100	86.713	ENSTTRG00000001401	SMG5	100	86.713	Tursiops_truncatus
ENSDNOG00000000051	SMG5	100	89.882	ENSUAMG00000013721	SMG5	100	89.173	Ursus_americanus
ENSDNOG00000000051	SMG5	98	85.155	ENSUMAG00000018041	SMG5	97	84.422	Ursus_maritimus
ENSDNOG00000000051	SMG5	98	82.038	ENSVPAG00000009446	SMG5	99	82.038	Vicugna_pacos
ENSDNOG00000000051	SMG5	100	90.275	ENSVVUG00000005887	SMG5	100	89.665	Vulpes_vulpes
ENSDNOG00000000051	SMG5	77	61.713	ENSXETG00000033791	SMG5	99	61.947	Xenopus_tropicalis
ENSDNOG00000000051	SMG5	70	69.231	ENSXCOG00000004379	smg5	81	78.836	Xiphophorus_couchianus
ENSDNOG00000000051	SMG5	99	63.434	ENSXMAG00000013499	smg5	88	78.571	Xiphophorus_maculatus