EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000000456 (Gene tree)
Gene ID: 101435839
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 25564 bases
Position: chrJH570473.1:2722135-2747698
Accession: 101435839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000000347	RTC	PF01137.21	1.9e-88	1	1
ENSDNOP00000018617	RTC	PF01137.21	4.1e-87	1	1
ENSDNOP00000000347	RTC_insert	PF05189.13	1.7e-24	1	1
ENSDNOP00000018617	RTC_insert	PF05189.13	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000030764	RTCA-201	2947	-	ENSDNOP00000018617	401 (aa)	-	UPI0003CC0960
ENSDNOT00000000456	RTCA-202	2842	-	ENSDNOP00000000347	366 (aa)	XP_004471740	UPI00032887FC

Gene Model

Click here to download ENSDNOG00000000456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000000456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000000456	RTCA	100	93.989	ENSG00000137996	RTCA	100	93.989	Homo_sapiens
ENSDNOG00000000456	RTCA	99	72.576	ENSAPOG00000001345	rtca	98	72.576	Acanthochromis_polyacanthus
ENSDNOG00000000456	RTCA	73	95.506	ENSAMEG00000008855	RTCA	99	95.506	Ailuropoda_melanoleuca
ENSDNOG00000000456	RTCA	99	72.299	ENSACIG00000019643	rtca	99	72.299	Amphilophus_citrinellus
ENSDNOG00000000456	RTCA	100	71.858	ENSAOCG00000014979	rtca	99	71.858	Amphiprion_ocellaris
ENSDNOG00000000456	RTCA	100	71.858	ENSAPEG00000006945	rtca	99	71.858	Amphiprion_percula
ENSDNOG00000000456	RTCA	100	70.765	ENSATEG00000006315	rtca	100	70.765	Anabas_testudineus
ENSDNOG00000000456	RTCA	96	79.661	ENSAPLG00000015430	RTCA	100	79.661	Anas_platyrhynchos
ENSDNOG00000000456	RTCA	50	68.500	ENSACAG00000003290	RTCA	94	83.030	Anolis_carolinensis
ENSDNOG00000000456	RTCA	100	93.169	ENSANAG00000025446	RTCA	100	93.169	Aotus_nancymaae
ENSDNOG00000000456	RTCA	100	70.765	ENSACLG00000020770	rtca	99	70.765	Astatotilapia_calliptera
ENSDNOG00000000456	RTCA	100	72.131	ENSAMXG00000043271	rtca	100	72.131	Astyanax_mexicanus
ENSDNOG00000000456	RTCA	100	95.082	ENSBTAG00000006321	RTCA	100	95.082	Bos_taurus
ENSDNOG00000000456	RTCA	100	93.716	ENSCJAG00000003398	RTCA	100	93.716	Callithrix_jacchus
ENSDNOG00000000456	RTCA	99	95.055	ENSCAFG00000020010	RTCA	67	95.055	Canis_familiaris
ENSDNOG00000000456	RTCA	99	95.055	ENSCAFG00020011528	RTCA	57	95.055	Canis_lupus_dingo
ENSDNOG00000000456	RTCA	100	94.809	ENSCHIG00000018937	RTCA	100	94.809	Capra_hircus
ENSDNOG00000000456	RTCA	100	93.716	ENSTSYG00000011305	RTCA	100	93.716	Carlito_syrichta
ENSDNOG00000000456	RTCA	100	93.443	ENSCCAG00000021844	RTCA	100	93.443	Cebus_capucinus
ENSDNOG00000000456	RTCA	100	90.765	ENSCATG00000019364	RTCA	100	93.851	Cercocebus_atys
ENSDNOG00000000456	RTCA	87	94.322	ENSCLAG00000006125	RTCA	100	94.322	Chinchilla_lanigera
ENSDNOG00000000456	RTCA	100	94.262	ENSCSAG00000001509	RTCA	100	94.262	Chlorocebus_sabaeus
ENSDNOG00000000456	RTCA	100	96.175	ENSCHOG00000005211	RTCA	100	96.175	Choloepus_hoffmanni
ENSDNOG00000000456	RTCA	100	83.607	ENSCPBG00000026658	RTCA	100	83.607	Chrysemys_picta_bellii
ENSDNOG00000000456	RTCA	98	55.307	ENSCING00000007875	-	98	55.307	Ciona_intestinalis
ENSDNOG00000000456	RTCA	98	54.596	ENSCSAVG00000007269	-	98	54.596	Ciona_savignyi
ENSDNOG00000000456	RTCA	100	93.989	ENSCANG00000040106	RTCA	100	93.989	Colobus_angolensis_palliatus
ENSDNOG00000000456	RTCA	73	91.450	ENSCGRG00001013163	Rtca	85	91.450	Cricetulus_griseus_chok1gshd
ENSDNOG00000000456	RTCA	99	69.613	ENSCSEG00000000530	rtca	97	69.613	Cynoglossus_semilaevis
ENSDNOG00000000456	RTCA	100	58.743	ENSCVAG00000021809	rtca	100	58.743	Cyprinodon_variegatus
ENSDNOG00000000456	RTCA	100	73.224	ENSDARG00000002215	rtca	100	73.224	Danio_rerio
ENSDNOG00000000456	RTCA	99	92.857	ENSDORG00000005448	Rtca	99	92.857	Dipodomys_ordii
ENSDNOG00000000456	RTCA	98	39.106	FBgn0025630	Rtca	98	39.106	Drosophila_melanogaster
ENSDNOG00000000456	RTCA	95	55.650	ENSEBUG00000008556	rtca	97	55.650	Eptatretus_burgeri
ENSDNOG00000000456	RTCA	100	94.809	ENSEASG00005015926	RTCA	100	94.809	Equus_asinus_asinus
ENSDNOG00000000456	RTCA	100	94.809	ENSECAG00000019831	RTCA	100	94.809	Equus_caballus
ENSDNOG00000000456	RTCA	91	83.526	ENSEEUG00000001165	RTCA	100	83.526	Erinaceus_europaeus
ENSDNOG00000000456	RTCA	98	71.944	ENSELUG00000003741	rtca	99	71.944	Esox_lucius
ENSDNOG00000000456	RTCA	99	95.330	ENSFCAG00000024460	RTCA	99	95.330	Felis_catus
ENSDNOG00000000456	RTCA	93	80.588	ENSFALG00000002443	RTCA	91	80.588	Ficedula_albicollis
ENSDNOG00000000456	RTCA	100	95.082	ENSFDAG00000012070	-	100	95.082	Fukomys_damarensis
ENSDNOG00000000456	RTCA	98	73.204	ENSFDAG00000016084	-	100	73.204	Fukomys_damarensis
ENSDNOG00000000456	RTCA	59	70.233	ENSFHEG00000002868	rtca	96	68.142	Fundulus_heteroclitus
ENSDNOG00000000456	RTCA	100	68.852	ENSGMOG00000013264	rtca	100	68.852	Gadus_morhua
ENSDNOG00000000456	RTCA	100	82.240	ENSGALG00000005277	RTCA	100	82.240	Gallus_gallus
ENSDNOG00000000456	RTCA	100	71.858	ENSGAFG00000011853	rtca	99	71.858	Gambusia_affinis
ENSDNOG00000000456	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSDNOG00000000456	RTCA	80	83.276	ENSGAGG00000023306	RTCA	100	83.276	Gopherus_agassizii
ENSDNOG00000000456	RTCA	100	93.169	ENSGGOG00000044018	-	100	93.169	Gorilla_gorilla
ENSDNOG00000000456	RTCA	100	93.989	ENSGGOG00000009546	-	100	93.989	Gorilla_gorilla
ENSDNOG00000000456	RTCA	100	70.492	ENSHBUG00000002114	rtca	99	70.492	Haplochromis_burtoni
ENSDNOG00000000456	RTCA	100	93.989	ENSHGLG00000002617	RTCA	100	93.989	Heterocephalus_glaber_female
ENSDNOG00000000456	RTCA	100	93.989	ENSHGLG00100006056	RTCA	100	93.989	Heterocephalus_glaber_male
ENSDNOG00000000456	RTCA	100	63.934	ENSHCOG00000020628	rtca	89	63.934	Hippocampus_comes
ENSDNOG00000000456	RTCA	100	71.858	ENSIPUG00000024803	rtca	100	71.858	Ictalurus_punctatus
ENSDNOG00000000456	RTCA	100	82.289	ENSSTOG00000033099	-	100	82.289	Ictidomys_tridecemlineatus
ENSDNOG00000000456	RTCA	100	87.978	ENSSTOG00000013528	-	100	87.978	Ictidomys_tridecemlineatus
ENSDNOG00000000456	RTCA	100	67.486	ENSJJAG00000016178	Rtca	100	67.486	Jaculus_jaculus
ENSDNOG00000000456	RTCA	99	72.853	ENSKMAG00000006651	rtca	98	72.853	Kryptolebias_marmoratus
ENSDNOG00000000456	RTCA	88	69.782	ENSLBEG00000002448	-	99	69.782	Labrus_bergylta
ENSDNOG00000000456	RTCA	99	69.806	ENSLBEG00000028971	rtca	99	69.806	Labrus_bergylta
ENSDNOG00000000456	RTCA	100	77.049	ENSLACG00000013666	RTCA	100	77.049	Latimeria_chalumnae
ENSDNOG00000000456	RTCA	99	73.425	ENSLOCG00000000093	rtca	99	73.425	Lepisosteus_oculatus
ENSDNOG00000000456	RTCA	100	94.809	ENSLAFG00000001473	RTCA	100	94.809	Loxodonta_africana
ENSDNOG00000000456	RTCA	100	94.262	ENSMFAG00000034132	RTCA	100	94.262	Macaca_fascicularis
ENSDNOG00000000456	RTCA	100	93.716	ENSMMUG00000019105	RTCA	100	93.716	Macaca_mulatta
ENSDNOG00000000456	RTCA	84	94.175	ENSMNEG00000037163	RTCA	100	94.175	Macaca_nemestrina
ENSDNOG00000000456	RTCA	100	77.322	ENSMLEG00000042151	RTCA	100	77.322	Mandrillus_leucophaeus
ENSDNOG00000000456	RTCA	100	73.224	ENSMAMG00000016536	rtca	100	73.224	Mastacembelus_armatus
ENSDNOG00000000456	RTCA	100	70.765	ENSMZEG00005017945	rtca	99	70.765	Maylandia_zebra
ENSDNOG00000000456	RTCA	87	80.878	ENSMGAG00000006892	RTCA	99	80.878	Meleagris_gallopavo
ENSDNOG00000000456	RTCA	100	91.257	ENSMAUG00000008488	Rtca	100	91.257	Mesocricetus_auratus
ENSDNOG00000000456	RTCA	84	95.469	ENSMICG00000008643	RTCA	100	95.469	Microcebus_murinus
ENSDNOG00000000456	RTCA	100	92.077	ENSMOCG00000016660	Rtca	100	92.077	Microtus_ochrogaster
ENSDNOG00000000456	RTCA	84	73.139	ENSMMOG00000007750	rtca	100	73.139	Mola_mola
ENSDNOG00000000456	RTCA	99	90.959	ENSMODG00000003557	RTCA	99	90.959	Monodelphis_domestica
ENSDNOG00000000456	RTCA	100	72.951	ENSMALG00000020844	rtca	100	72.951	Monopterus_albus
ENSDNOG00000000456	RTCA	100	90.437	MGP_CAROLIEiJ_G0025565	Rtca	100	90.437	Mus_caroli
ENSDNOG00000000456	RTCA	100	89.891	ENSMUSG00000000339	Rtca	100	89.891	Mus_musculus
ENSDNOG00000000456	RTCA	100	90.164	MGP_PahariEiJ_G0027011	Rtca	100	90.164	Mus_pahari
ENSDNOG00000000456	RTCA	100	90.164	MGP_SPRETEiJ_G0026515	Rtca	100	90.164	Mus_spretus
ENSDNOG00000000456	RTCA	99	95.604	ENSMPUG00000012119	RTCA	99	95.604	Mustela_putorius_furo
ENSDNOG00000000456	RTCA	100	87.738	ENSMLUG00000009922	RTCA	100	87.738	Myotis_lucifugus
ENSDNOG00000000456	RTCA	100	91.530	ENSNGAG00000011540	Rtca	99	91.530	Nannospalax_galili
ENSDNOG00000000456	RTCA	100	70.765	ENSNBRG00000003062	rtca	99	70.765	Neolamprologus_brichardi
ENSDNOG00000000456	RTCA	100	94.262	ENSNLEG00000031426	RTCA	100	94.262	Nomascus_leucogenys
ENSDNOG00000000456	RTCA	62	93.902	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSDNOG00000000456	RTCA	73	87.361	ENSOPRG00000012092	RTCA	71	87.361	Ochotona_princeps
ENSDNOG00000000456	RTCA	95	94.540	ENSODEG00000006990	RTCA	97	94.602	Octodon_degus
ENSDNOG00000000456	RTCA	100	70.765	ENSONIG00000007753	rtca	99	70.765	Oreochromis_niloticus
ENSDNOG00000000456	RTCA	87	87.697	ENSOANG00000012055	RTCA	98	87.697	Ornithorhynchus_anatinus
ENSDNOG00000000456	RTCA	100	94.809	ENSOCUG00000014247	RTCA	100	94.809	Oryctolagus_cuniculus
ENSDNOG00000000456	RTCA	100	71.311	ENSORLG00000013605	rtca	100	71.311	Oryzias_latipes
ENSDNOG00000000456	RTCA	100	71.038	ENSORLG00020001904	rtca	100	71.038	Oryzias_latipes_hni
ENSDNOG00000000456	RTCA	100	71.038	ENSORLG00015021064	rtca	100	71.038	Oryzias_latipes_hsok
ENSDNOG00000000456	RTCA	100	71.858	ENSOMEG00000000756	rtca	100	71.858	Oryzias_melastigma
ENSDNOG00000000456	RTCA	100	84.973	ENSOGAG00000005627	RTCA	100	84.973	Otolemur_garnettii
ENSDNOG00000000456	RTCA	87	94.025	ENSOARG00000018122	RTCA	100	94.025	Ovis_aries
ENSDNOG00000000456	RTCA	100	90.237	ENSPPAG00000035119	RTCA	100	93.528	Pan_paniscus
ENSDNOG00000000456	RTCA	99	95.055	ENSPPRG00000000350	RTCA	99	95.055	Panthera_pardus
ENSDNOG00000000456	RTCA	99	95.330	ENSPTIG00000012816	RTCA	99	95.330	Panthera_tigris_altaica
ENSDNOG00000000456	RTCA	100	90.237	ENSPTRG00000001004	RTCA	100	93.528	Pan_troglodytes
ENSDNOG00000000456	RTCA	100	93.989	ENSPANG00000000346	RTCA	100	93.989	Papio_anubis
ENSDNOG00000000456	RTCA	100	74.044	ENSPKIG00000001653	rtca	100	74.044	Paramormyrops_kingsleyae
ENSDNOG00000000456	RTCA	100	84.153	ENSPSIG00000011408	RTCA	100	84.153	Pelodiscus_sinensis
ENSDNOG00000000456	RTCA	100	91.530	ENSPEMG00000018582	Rtca	100	91.530	Peromyscus_maniculatus_bairdii
ENSDNOG00000000456	RTCA	99	59.116	ENSPMAG00000009110	rtca	99	58.630	Petromyzon_marinus
ENSDNOG00000000456	RTCA	99	91.460	ENSPCIG00000007684	RTCA	99	91.460	Phascolarctos_cinereus
ENSDNOG00000000456	RTCA	100	72.207	ENSPFOG00000004824	rtca	100	72.207	Poecilia_formosa
ENSDNOG00000000456	RTCA	100	72.404	ENSPLAG00000011753	rtca	99	72.404	Poecilia_latipinna
ENSDNOG00000000456	RTCA	100	72.404	ENSPMEG00000020469	rtca	99	72.404	Poecilia_mexicana
ENSDNOG00000000456	RTCA	100	73.224	ENSPREG00000001365	rtca	99	73.224	Poecilia_reticulata
ENSDNOG00000000456	RTCA	100	93.989	ENSPPYG00000001115	RTCA	100	93.989	Pongo_abelii
ENSDNOG00000000456	RTCA	100	90.984	ENSPCAG00000005076	RTCA	100	90.984	Procavia_capensis
ENSDNOG00000000456	RTCA	100	95.355	ENSPCOG00000005603	RTCA	100	95.355	Propithecus_coquereli
ENSDNOG00000000456	RTCA	100	89.710	ENSPVAG00000009478	RTCA	100	89.710	Pteropus_vampyrus
ENSDNOG00000000456	RTCA	100	70.765	ENSPNYG00000004722	rtca	99	70.765	Pundamilia_nyererei
ENSDNOG00000000456	RTCA	100	72.131	ENSPNAG00000022270	rtca	100	72.131	Pygocentrus_nattereri
ENSDNOG00000000456	RTCA	100	90.437	ENSRNOG00000014575	Rtca	100	90.437	Rattus_norvegicus
ENSDNOG00000000456	RTCA	100	90.765	ENSRBIG00000041180	RTCA	100	93.851	Rhinopithecus_bieti
ENSDNOG00000000456	RTCA	100	93.989	ENSRROG00000024929	RTCA	100	93.989	Rhinopithecus_roxellana
ENSDNOG00000000456	RTCA	100	92.896	ENSSBOG00000028626	RTCA	100	92.896	Saimiri_boliviensis_boliviensis
ENSDNOG00000000456	RTCA	100	90.984	ENSSHAG00000001758	RTCA	100	90.984	Sarcophilus_harrisii
ENSDNOG00000000456	RTCA	98	70.278	ENSSMAG00000014680	rtca	97	70.278	Scophthalmus_maximus
ENSDNOG00000000456	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSDNOG00000000456	RTCA	96	72.365	ENSSLDG00000018985	rtca	95	72.443	Seriola_lalandi_dorsalis
ENSDNOG00000000456	RTCA	87	85.489	ENSSARG00000013993	RTCA	100	85.489	Sorex_araneus
ENSDNOG00000000456	RTCA	100	70.765	ENSSPAG00000011938	rtca	99	70.765	Stegastes_partitus
ENSDNOG00000000456	RTCA	100	95.082	ENSSSCG00000006865	RTCA	100	95.082	Sus_scrofa
ENSDNOG00000000456	RTCA	100	81.967	ENSTGUG00000005154	RTCA	100	81.967	Taeniopygia_guttata
ENSDNOG00000000456	RTCA	100	71.311	ENSTRUG00000008799	rtca	100	71.311	Takifugu_rubripes
ENSDNOG00000000456	RTCA	99	72.802	ENSTNIG00000004725	rtca	99	72.802	Tetraodon_nigroviridis
ENSDNOG00000000456	RTCA	59	80.000	ENSTBEG00000000943	RTCA	82	65.546	Tupaia_belangeri
ENSDNOG00000000456	RTCA	100	90.765	ENSTTRG00000015327	RTCA	100	90.765	Tursiops_truncatus
ENSDNOG00000000456	RTCA	94	92.420	ENSUAMG00000017265	RTCA	96	92.420	Ursus_americanus
ENSDNOG00000000456	RTCA	99	94.505	ENSUMAG00000007881	RTCA	99	94.505	Ursus_maritimus
ENSDNOG00000000456	RTCA	87	84.543	ENSVPAG00000001039	RTCA	84	84.543	Vicugna_pacos
ENSDNOG00000000456	RTCA	99	94.780	ENSVVUG00000022041	RTCA	67	94.780	Vulpes_vulpes
ENSDNOG00000000456	RTCA	99	64.305	ENSXETG00000031661	RTCA	99	64.305	Xenopus_tropicalis
ENSDNOG00000000456	RTCA	100	63.115	ENSXCOG00000008002	rtca	100	63.115	Xiphophorus_couchianus
ENSDNOG00000000456	RTCA	100	72.131	ENSXMAG00000005482	rtca	99	72.131	Xiphophorus_maculatus