EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000000513 (Gene tree)
Gene ID: 101430467
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 2739 bases
Position: chrJH570429.1:113654-116392
Accession: 101430467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000027120	RNA_ligase	PF09414.10	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000000513	LIG4-201	2739	-	ENSDNOP00000027120	912 (aa)	XP_004471260	UPI000328E8A9

Gene Model

Click here to download ENSDNOG00000000513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000000513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000000513	LIG4	100	90.132	ENSG00000174405	LIG4	100	90.132	Homo_sapiens
ENSDNOG00000000513	LIG4	99	64.764	ENSAPOG00000000866	lig4	99	65.093	Acanthochromis_polyacanthus
ENSDNOG00000000513	LIG4	100	87.171	ENSAMEG00000019685	LIG4	99	87.171	Ailuropoda_melanoleuca
ENSDNOG00000000513	LIG4	99	65.495	ENSACIG00000018309	lig4	99	65.824	Amphilophus_citrinellus
ENSDNOG00000000513	LIG4	99	64.764	ENSAOCG00000011768	lig4	99	65.093	Amphiprion_ocellaris
ENSDNOG00000000513	LIG4	99	64.984	ENSAPEG00000017815	lig4	99	65.313	Amphiprion_percula
ENSDNOG00000000513	LIG4	99	64.764	ENSATEG00000005583	lig4	99	64.984	Anabas_testudineus
ENSDNOG00000000513	LIG4	97	75.369	ENSAPLG00000001673	LIG4	99	75.369	Anas_platyrhynchos
ENSDNOG00000000513	LIG4	99	75.221	ENSACAG00000014566	LIG4	99	75.221	Anolis_carolinensis
ENSDNOG00000000513	LIG4	100	89.254	ENSANAG00000012446	LIG4	100	89.254	Aotus_nancymaae
ENSDNOG00000000513	LIG4	99	65.495	ENSACLG00000027051	lig4	99	65.495	Astatotilapia_calliptera
ENSDNOG00000000513	LIG4	99	64.262	ENSAMXG00000008192	lig4	94	64.262	Astyanax_mexicanus
ENSDNOG00000000513	LIG4	100	87.500	ENSBTAG00000015868	LIG4	100	87.500	Bos_taurus
ENSDNOG00000000513	LIG4	100	88.377	ENSCJAG00000014689	LIG4	100	88.377	Callithrix_jacchus
ENSDNOG00000000513	LIG4	100	88.377	ENSCAFG00000006031	LIG4	100	88.377	Canis_familiaris
ENSDNOG00000000513	LIG4	100	88.377	ENSCAFG00020021230	LIG4	100	88.377	Canis_lupus_dingo
ENSDNOG00000000513	LIG4	100	86.952	ENSCHIG00000001019	LIG4	100	86.952	Capra_hircus
ENSDNOG00000000513	LIG4	99	86.394	ENSCAPG00000006284	LIG4	99	86.394	Cavia_aperea
ENSDNOG00000000513	LIG4	100	86.404	ENSCPOG00000014266	LIG4	100	86.404	Cavia_porcellus
ENSDNOG00000000513	LIG4	100	89.254	ENSCCAG00000019971	LIG4	100	89.254	Cebus_capucinus
ENSDNOG00000000513	LIG4	100	89.803	ENSCATG00000021075	LIG4	100	89.803	Cercocebus_atys
ENSDNOG00000000513	LIG4	100	86.732	ENSCLAG00000003376	LIG4	100	86.732	Chinchilla_lanigera
ENSDNOG00000000513	LIG4	100	90.022	ENSCSAG00000000211	LIG4	100	90.022	Chlorocebus_sabaeus
ENSDNOG00000000513	LIG4	99	78.698	ENSCPBG00000023291	LIG4	100	78.105	Chrysemys_picta_bellii
ENSDNOG00000000513	LIG4	69	45.611	ENSCING00000009536	-	94	45.645	Ciona_intestinalis
ENSDNOG00000000513	LIG4	83	45.550	ENSCSAVG00000010336	-	98	45.478	Ciona_savignyi
ENSDNOG00000000513	LIG4	100	89.803	ENSCANG00000005805	LIG4	100	89.803	Colobus_angolensis_palliatus
ENSDNOG00000000513	LIG4	100	85.104	ENSCGRG00001012072	Lig4	100	85.104	Cricetulus_griseus_chok1gshd
ENSDNOG00000000513	LIG4	100	85.104	ENSCGRG00000013417	Lig4	100	85.104	Cricetulus_griseus_crigri
ENSDNOG00000000513	LIG4	97	65.646	ENSCSEG00000013905	lig4	95	65.646	Cynoglossus_semilaevis
ENSDNOG00000000513	LIG4	99	65.708	ENSCVAG00000007896	lig4	99	65.708	Cyprinodon_variegatus
ENSDNOG00000000513	LIG4	99	64.452	ENSDARG00000060620	lig4	98	64.452	Danio_rerio
ENSDNOG00000000513	LIG4	100	85.636	ENSDORG00000027303	Lig4	100	85.636	Dipodomys_ordii
ENSDNOG00000000513	LIG4	89	30.607	FBgn0030506	Lig4	91	30.607	Drosophila_melanogaster
ENSDNOG00000000513	LIG4	99	84.164	ENSETEG00000015563	LIG4	100	84.164	Echinops_telfairi
ENSDNOG00000000513	LIG4	99	42.932	ENSEBUG00000014243	lig4	99	42.932	Eptatretus_burgeri
ENSDNOG00000000513	LIG4	100	89.693	ENSEASG00005022073	LIG4	100	89.693	Equus_asinus_asinus
ENSDNOG00000000513	LIG4	100	89.254	ENSECAG00000003257	LIG4	100	89.254	Equus_caballus
ENSDNOG00000000513	LIG4	99	65.969	ENSELUG00000006787	lig4	99	65.859	Esox_lucius
ENSDNOG00000000513	LIG4	100	87.610	ENSFCAG00000031985	LIG4	100	87.610	Felis_catus
ENSDNOG00000000513	LIG4	89	75.184	ENSFALG00000004214	LIG4	98	75.184	Ficedula_albicollis
ENSDNOG00000000513	LIG4	100	87.939	ENSFDAG00000008973	LIG4	100	87.939	Fukomys_damarensis
ENSDNOG00000000513	LIG4	99	64.934	ENSFHEG00000007398	lig4	89	64.934	Fundulus_heteroclitus
ENSDNOG00000000513	LIG4	85	63.871	ENSGMOG00000012843	lig4	99	63.871	Gadus_morhua
ENSDNOG00000000513	LIG4	100	74.700	ENSGALG00000016854	LIG4	100	74.700	Gallus_gallus
ENSDNOG00000000513	LIG4	99	64.850	ENSGAFG00000019779	lig4	95	64.764	Gambusia_affinis
ENSDNOG00000000513	LIG4	99	62.611	ENSGACG00000014135	lig4	99	62.611	Gasterosteus_aculeatus
ENSDNOG00000000513	LIG4	100	90.022	ENSGGOG00000027771	LIG4	100	90.022	Gorilla_gorilla
ENSDNOG00000000513	LIG4	99	65.275	ENSHBUG00000006245	lig4	99	65.275	Haplochromis_burtoni
ENSDNOG00000000513	LIG4	100	87.171	ENSHGLG00000000718	LIG4	100	87.171	Heterocephalus_glaber_female
ENSDNOG00000000513	LIG4	100	87.171	ENSHGLG00100003265	LIG4	100	87.171	Heterocephalus_glaber_male
ENSDNOG00000000513	LIG4	99	63.447	ENSHCOG00000012010	lig4	99	63.447	Hippocampus_comes
ENSDNOG00000000513	LIG4	99	64.764	ENSIPUG00000013748	lig4	99	64.764	Ictalurus_punctatus
ENSDNOG00000000513	LIG4	100	87.171	ENSSTOG00000024303	LIG4	100	87.171	Ictidomys_tridecemlineatus
ENSDNOG00000000513	LIG4	100	84.978	ENSJJAG00000006750	Lig4	100	84.978	Jaculus_jaculus
ENSDNOG00000000513	LIG4	99	64.049	ENSKMAG00000001149	lig4	99	64.049	Kryptolebias_marmoratus
ENSDNOG00000000513	LIG4	91	65.030	ENSLBEG00000014578	lig4	100	65.269	Labrus_bergylta
ENSDNOG00000000513	LIG4	99	72.265	ENSLACG00000003282	LIG4	99	71.934	Latimeria_chalumnae
ENSDNOG00000000513	LIG4	99	70.472	ENSLOCG00000008901	lig4	98	70.472	Lepisosteus_oculatus
ENSDNOG00000000513	LIG4	100	87.637	ENSLAFG00000031152	LIG4	100	87.418	Loxodonta_africana
ENSDNOG00000000513	LIG4	100	90.022	ENSMFAG00000037235	LIG4	100	90.022	Macaca_fascicularis
ENSDNOG00000000513	LIG4	100	90.022	ENSMMUG00000008874	LIG4	100	90.022	Macaca_mulatta
ENSDNOG00000000513	LIG4	100	90.022	ENSMNEG00000023575	LIG4	100	90.022	Macaca_nemestrina
ENSDNOG00000000513	LIG4	100	89.912	ENSMLEG00000026720	LIG4	100	89.912	Mandrillus_leucophaeus
ENSDNOG00000000513	LIG4	99	65.203	ENSMAMG00000008472	lig4	99	65.423	Mastacembelus_armatus
ENSDNOG00000000513	LIG4	99	65.495	ENSMZEG00005001855	lig4	99	65.495	Maylandia_zebra
ENSDNOG00000000513	LIG4	100	75.136	ENSMGAG00000015532	LIG4	100	75.136	Meleagris_gallopavo
ENSDNOG00000000513	LIG4	100	82.675	ENSMOCG00000019000	Lig4	100	82.675	Microtus_ochrogaster
ENSDNOG00000000513	LIG4	99	64.823	ENSMMOG00000004390	lig4	99	63.938	Mola_mola
ENSDNOG00000000513	LIG4	100	84.320	ENSMODG00000025064	LIG4	100	84.320	Monodelphis_domestica
ENSDNOG00000000513	LIG4	99	65.044	ENSMALG00000008555	lig4	99	65.044	Monopterus_albus
ENSDNOG00000000513	LIG4	100	84.649	MGP_CAROLIEiJ_G0030809	Lig4	100	84.649	Mus_caroli
ENSDNOG00000000513	LIG4	100	84.539	ENSMUSG00000049717	Lig4	100	84.539	Mus_musculus
ENSDNOG00000000513	LIG4	100	84.649	MGP_PahariEiJ_G0021270	Lig4	100	84.649	Mus_pahari
ENSDNOG00000000513	LIG4	100	84.649	MGP_SPRETEiJ_G0031917	Lig4	100	84.649	Mus_spretus
ENSDNOG00000000513	LIG4	100	86.404	ENSMPUG00000018675	LIG4	100	86.404	Mustela_putorius_furo
ENSDNOG00000000513	LIG4	100	88.596	ENSMLUG00000001267	LIG4	100	88.596	Myotis_lucifugus
ENSDNOG00000000513	LIG4	100	84.978	ENSNGAG00000013258	Lig4	100	84.978	Nannospalax_galili
ENSDNOG00000000513	LIG4	99	65.495	ENSNBRG00000021252	lig4	99	65.495	Neolamprologus_brichardi
ENSDNOG00000000513	LIG4	100	89.803	ENSNLEG00000007888	LIG4	100	89.803	Nomascus_leucogenys
ENSDNOG00000000513	LIG4	100	86.513	ENSOPRG00000005765	LIG4	100	86.513	Ochotona_princeps
ENSDNOG00000000513	LIG4	100	85.965	ENSODEG00000019683	LIG4	100	85.965	Octodon_degus
ENSDNOG00000000513	LIG4	99	64.956	ENSONIG00000011969	lig4	98	65.284	Oreochromis_niloticus
ENSDNOG00000000513	LIG4	100	89.254	ENSOCUG00000015734	LIG4	100	89.254	Oryctolagus_cuniculus
ENSDNOG00000000513	LIG4	99	63.666	ENSORLG00000004041	lig4	99	63.557	Oryzias_latipes
ENSDNOG00000000513	LIG4	99	64.105	ENSORLG00020019607	lig4	99	63.996	Oryzias_latipes_hni
ENSDNOG00000000513	LIG4	99	63.557	ENSORLG00015017754	lig4	99	63.447	Oryzias_latipes_hsok
ENSDNOG00000000513	LIG4	74	69.424	ENSOMEG00000003459	lig4	98	69.424	Oryzias_melastigma
ENSDNOG00000000513	LIG4	100	87.952	ENSOGAG00000032120	LIG4	99	87.952	Otolemur_garnettii
ENSDNOG00000000513	LIG4	82	88.472	ENSOARG00000005590	LIG4	98	88.472	Ovis_aries
ENSDNOG00000000513	LIG4	100	90.132	ENSPPAG00000032998	LIG4	100	90.132	Pan_paniscus
ENSDNOG00000000513	LIG4	100	88.048	ENSPPRG00000017804	LIG4	100	88.048	Panthera_pardus
ENSDNOG00000000513	LIG4	100	87.939	ENSPTIG00000010051	LIG4	100	87.939	Panthera_tigris_altaica
ENSDNOG00000000513	LIG4	100	90.022	ENSPTRG00000006025	LIG4	100	90.022	Pan_troglodytes
ENSDNOG00000000513	LIG4	100	89.912	ENSPANG00000007562	LIG4	100	89.912	Papio_anubis
ENSDNOG00000000513	LIG4	99	66.338	ENSPKIG00000011645	lig4	98	66.338	Paramormyrops_kingsleyae
ENSDNOG00000000513	LIG4	99	78.289	ENSPSIG00000001504	LIG4	99	78.289	Pelodiscus_sinensis
ENSDNOG00000000513	LIG4	99	62.930	ENSPMGG00000013486	lig4	99	62.500	Periophthalmus_magnuspinnatus
ENSDNOG00000000513	LIG4	100	84.447	ENSPEMG00000000076	Lig4	100	84.447	Peromyscus_maniculatus_bairdii
ENSDNOG00000000513	LIG4	100	84.775	ENSPCIG00000021882	LIG4	100	84.320	Phascolarctos_cinereus
ENSDNOG00000000513	LIG4	99	64.889	ENSPFOG00000000797	lig4	99	64.764	Poecilia_formosa
ENSDNOG00000000513	LIG4	99	64.778	ENSPLAG00000001196	lig4	99	64.654	Poecilia_latipinna
ENSDNOG00000000513	LIG4	99	65.000	ENSPMEG00000021353	lig4	99	64.874	Poecilia_mexicana
ENSDNOG00000000513	LIG4	99	64.889	ENSPREG00000007323	lig4	99	64.654	Poecilia_reticulata
ENSDNOG00000000513	LIG4	100	89.912	ENSPPYG00000005540	LIG4	100	89.912	Pongo_abelii
ENSDNOG00000000513	LIG4	100	88.487	ENSPVAG00000016403	LIG4	100	88.487	Pteropus_vampyrus
ENSDNOG00000000513	LIG4	99	65.385	ENSPNYG00000009660	lig4	99	65.385	Pundamilia_nyererei
ENSDNOG00000000513	LIG4	100	64.184	ENSPNAG00000028056	lig4	100	64.184	Pygocentrus_nattereri
ENSDNOG00000000513	LIG4	100	64.184	ENSPNAG00000028069	LIG4	100	64.184	Pygocentrus_nattereri
ENSDNOG00000000513	LIG4	100	84.101	ENSRNOG00000014605	Lig4	100	84.101	Rattus_norvegicus
ENSDNOG00000000513	LIG4	100	88.268	ENSRBIG00000039962	LIG4	100	88.268	Rhinopithecus_bieti
ENSDNOG00000000513	LIG4	100	89.474	ENSRROG00000006040	LIG4	100	89.474	Rhinopithecus_roxellana
ENSDNOG00000000513	LIG4	100	89.145	ENSSBOG00000019029	LIG4	100	89.145	Saimiri_boliviensis_boliviensis
ENSDNOG00000000513	LIG4	100	80.702	ENSSHAG00000009525	LIG4	100	80.702	Sarcophilus_harrisii
ENSDNOG00000000513	LIG4	100	65.322	ENSSFOG00015012835	lig4	100	65.322	Scleropages_formosus
ENSDNOG00000000513	LIG4	99	62.500	ENSSMAG00000011267	lig4	99	62.500	Scophthalmus_maximus
ENSDNOG00000000513	LIG4	99	65.338	ENSSDUG00000010343	lig4	98	65.338	Seriola_dumerili
ENSDNOG00000000513	LIG4	99	63.557	ENSSLDG00000003239	lig4	99	63.557	Seriola_lalandi_dorsalis
ENSDNOG00000000513	LIG4	100	80.765	ENSSARG00000006573	LIG4	100	80.765	Sorex_araneus
ENSDNOG00000000513	LIG4	93	76.596	ENSSPUG00000002444	LIG4	100	76.596	Sphenodon_punctatus
ENSDNOG00000000513	LIG4	99	64.984	ENSSPAG00000001609	lig4	99	64.984	Stegastes_partitus
ENSDNOG00000000513	LIG4	100	86.952	ENSSSCG00000009540	LIG4	100	86.952	Sus_scrofa
ENSDNOG00000000513	LIG4	99	74.807	ENSTGUG00000010795	LIG4	99	74.807	Taeniopygia_guttata
ENSDNOG00000000513	LIG4	99	64.403	ENSTRUG00000009984	lig4	99	64.403	Takifugu_rubripes
ENSDNOG00000000513	LIG4	99	64.874	ENSTNIG00000010348	lig4	99	65.093	Tetraodon_nigroviridis
ENSDNOG00000000513	LIG4	100	88.706	ENSTBEG00000017741	LIG4	100	88.706	Tupaia_belangeri
ENSDNOG00000000513	LIG4	100	87.610	ENSTTRG00000012660	LIG4	100	87.610	Tursiops_truncatus
ENSDNOG00000000513	LIG4	100	87.281	ENSUAMG00000003773	LIG4	100	87.281	Ursus_americanus
ENSDNOG00000000513	LIG4	99	72.057	ENSXETG00000002654	lig4	99	72.057	Xenopus_tropicalis
ENSDNOG00000000513	LIG4	99	64.889	ENSXCOG00000017401	lig4	99	64.435	Xiphophorus_couchianus
ENSDNOG00000000513	LIG4	99	65.150	ENSXMAG00000015142	lig4	99	64.693	Xiphophorus_maculatus