EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000002418 (Gene tree)
Gene ID: 101423812
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 21333 bases
Position: chrJH564260.1:1160269-1181601
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000001878	AD	PF09793.9	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000002417	LSM12-201	675	-	ENSDNOP00000001878	214 (aa)	-	UPI0003CBE6E5

Gene Model

Click here to download ENSDNOG00000002418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000002418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000002418	LSM12	91	99.487	ENSG00000161654	LSM12	100	99.487	Homo_sapiens
ENSDNOG00000002418	LSM12	91	86.224	ENSAPOG00000007907	lsm12b	100	86.224	Acanthochromis_polyacanthus
ENSDNOG00000002418	LSM12	91	97.475	ENSAMEG00000018321	LSM12	100	97.475	Ailuropoda_melanoleuca
ENSDNOG00000002418	LSM12	91	84.184	ENSACIG00000008538	lsm12b	100	84.184	Amphilophus_citrinellus
ENSDNOG00000002418	LSM12	94	83.902	ENSAOCG00000021847	lsm12b	92	83.902	Amphiprion_ocellaris
ENSDNOG00000002418	LSM12	91	85.714	ENSAPEG00000002252	lsm12b	100	85.714	Amphiprion_percula
ENSDNOG00000002418	LSM12	91	85.204	ENSATEG00000005705	lsm12b	100	85.204	Anabas_testudineus
ENSDNOG00000002418	LSM12	90	94.301	ENSACAG00000004618	LSM12	99	94.301	Anolis_carolinensis
ENSDNOG00000002418	LSM12	91	99.487	ENSANAG00000029011	LSM12	100	99.487	Aotus_nancymaae
ENSDNOG00000002418	LSM12	91	84.694	ENSACLG00000026332	lsm12b	100	84.694	Astatotilapia_calliptera
ENSDNOG00000002418	LSM12	100	74.884	ENSAMXG00000036117	lsm12a	92	78.680	Astyanax_mexicanus
ENSDNOG00000002418	LSM12	91	84.694	ENSAMXG00000032952	lsm12b	100	84.694	Astyanax_mexicanus
ENSDNOG00000002418	LSM12	91	99.487	ENSBTAG00000016252	LSM12	100	99.487	Bos_taurus
ENSDNOG00000002418	LSM12	91	99.487	ENSCJAG00000048480	LSM12	100	99.487	Callithrix_jacchus
ENSDNOG00000002418	LSM12	100	98.598	ENSCAFG00000014379	LSM12	100	98.598	Canis_familiaris
ENSDNOG00000002418	LSM12	91	99.487	ENSCAFG00020012173	LSM12	100	99.487	Canis_lupus_dingo
ENSDNOG00000002418	LSM12	91	99.487	ENSCHIG00000018175	LSM12	100	99.487	Capra_hircus
ENSDNOG00000002418	LSM12	91	99.487	ENSTSYG00000036361	LSM12	100	99.487	Carlito_syrichta
ENSDNOG00000002418	LSM12	76	93.827	ENSCAPG00000009647	LSM12	89	93.827	Cavia_aperea
ENSDNOG00000002418	LSM12	91	97.436	ENSCPOG00000012860	LSM12	100	97.436	Cavia_porcellus
ENSDNOG00000002418	LSM12	91	99.487	ENSCCAG00000032905	LSM12	100	99.487	Cebus_capucinus
ENSDNOG00000002418	LSM12	91	99.487	ENSCATG00000030577	-	100	99.487	Cercocebus_atys
ENSDNOG00000002418	LSM12	91	98.462	ENSCLAG00000015759	LSM12	100	98.462	Chinchilla_lanigera
ENSDNOG00000002418	LSM12	91	98.974	ENSCSAG00000003486	LSM12	100	98.974	Chlorocebus_sabaeus
ENSDNOG00000002418	LSM12	51	98.165	ENSCHOG00000001198	LSM12	100	98.165	Choloepus_hoffmanni
ENSDNOG00000002418	LSM12	90	93.782	ENSCPBG00000027105	LSM12	99	93.782	Chrysemys_picta_bellii
ENSDNOG00000002418	LSM12	91	99.487	ENSCANG00000043328	LSM12	100	99.487	Colobus_angolensis_palliatus
ENSDNOG00000002418	LSM12	91	99.487	ENSCGRG00001002094	Lsm12	100	99.487	Cricetulus_griseus_chok1gshd
ENSDNOG00000002418	LSM12	72	99.351	ENSCGRG00000004316	Lsm12	95	92.262	Cricetulus_griseus_crigri
ENSDNOG00000002418	LSM12	91	84.694	ENSCSEG00000008434	lsm12b	100	84.694	Cynoglossus_semilaevis
ENSDNOG00000002418	LSM12	91	84.694	ENSCVAG00000008755	lsm12b	100	84.694	Cyprinodon_variegatus
ENSDNOG00000002418	LSM12	91	77.041	ENSDARG00000028848	lsm12a	100	77.041	Danio_rerio
ENSDNOG00000002418	LSM12	91	85.204	ENSDARG00000109510	lsm12b	100	85.204	Danio_rerio
ENSDNOG00000002418	LSM12	91	99.487	ENSDORG00000016381	Lsm12	100	99.487	Dipodomys_ordii
ENSDNOG00000002418	LSM12	76	33.133	FBgn0030364	Lsm12	76	32.934	Drosophila_melanogaster
ENSDNOG00000002418	LSM12	67	31.646	FBgn0036057	CG14164	83	31.646	Drosophila_melanogaster
ENSDNOG00000002418	LSM12	82	87.429	ENSETEG00000011012	-	100	87.429	Echinops_telfairi
ENSDNOG00000002418	LSM12	91	98.974	ENSETEG00000008374	LSM12	100	98.974	Echinops_telfairi
ENSDNOG00000002418	LSM12	77	63.415	ENSEBUG00000016299	lsm12a	92	63.415	Eptatretus_burgeri
ENSDNOG00000002418	LSM12	91	99.487	ENSEASG00005010155	LSM12	100	99.487	Equus_asinus_asinus
ENSDNOG00000002418	LSM12	91	99.487	ENSECAG00000009071	LSM12	100	99.487	Equus_caballus
ENSDNOG00000002418	LSM12	71	98.039	ENSEEUG00000002419	-	100	98.039	Erinaceus_europaeus
ENSDNOG00000002418	LSM12	92	83.756	ENSELUG00000015538	lsm12b	100	79.082	Esox_lucius
ENSDNOG00000002418	LSM12	91	82.653	ENSELUG00000000256	-	100	82.653	Esox_lucius
ENSDNOG00000002418	LSM12	91	99.487	ENSFCAG00000037021	LSM12	100	99.487	Felis_catus
ENSDNOG00000002418	LSM12	69	98.649	ENSFDAG00000008954	LSM12	87	98.649	Fukomys_damarensis
ENSDNOG00000002418	LSM12	91	83.673	ENSFHEG00000019913	lsm12b	100	83.673	Fundulus_heteroclitus
ENSDNOG00000002418	LSM12	74	84.177	ENSGMOG00000015449	lsm12b	100	84.177	Gadus_morhua
ENSDNOG00000002418	LSM12	71	94.771	ENSGALG00000039803	LSM12	100	94.771	Gallus_gallus
ENSDNOG00000002418	LSM12	91	84.184	ENSGAFG00000011829	lsm12b	100	84.184	Gambusia_affinis
ENSDNOG00000002418	LSM12	74	84.810	ENSGACG00000003428	lsm12b	100	84.810	Gasterosteus_aculeatus
ENSDNOG00000002418	LSM12	90	94.819	ENSGAGG00000021965	LSM12	99	94.819	Gopherus_agassizii
ENSDNOG00000002418	LSM12	91	99.487	ENSGGOG00000010589	-	100	99.487	Gorilla_gorilla
ENSDNOG00000002418	LSM12	78	85.629	ENSHBUG00000007667	lsm12b	74	85.629	Haplochromis_burtoni
ENSDNOG00000002418	LSM12	91	99.487	ENSHGLG00000011411	LSM12	100	99.487	Heterocephalus_glaber_female
ENSDNOG00000002418	LSM12	83	86.740	ENSHGLG00100000241	LSM12	96	86.740	Heterocephalus_glaber_male
ENSDNOG00000002418	LSM12	91	84.184	ENSHCOG00000002094	lsm12b	100	84.184	Hippocampus_comes
ENSDNOG00000002418	LSM12	90	75.258	ENSIPUG00000008936	lsm12a	99	75.258	Ictalurus_punctatus
ENSDNOG00000002418	LSM12	91	85.204	ENSIPUG00000014800	lsm12	100	85.204	Ictalurus_punctatus
ENSDNOG00000002418	LSM12	91	99.487	ENSSTOG00000007403	LSM12	100	99.487	Ictidomys_tridecemlineatus
ENSDNOG00000002418	LSM12	91	98.462	ENSJJAG00000004364	-	100	98.462	Jaculus_jaculus
ENSDNOG00000002418	LSM12	73	84.277	ENSJJAG00000014652	-	95	84.277	Jaculus_jaculus
ENSDNOG00000002418	LSM12	88	87.368	ENSJJAG00000011793	-	100	87.368	Jaculus_jaculus
ENSDNOG00000002418	LSM12	78	86.310	ENSKMAG00000007704	lsm12b	57	86.310	Kryptolebias_marmoratus
ENSDNOG00000002418	LSM12	91	85.714	ENSLBEG00000027999	lsm12b	100	85.714	Labrus_bergylta
ENSDNOG00000002418	LSM12	90	90.674	ENSLACG00000015981	LSM12	99	90.674	Latimeria_chalumnae
ENSDNOG00000002418	LSM12	92	84.264	ENSLOCG00000013079	lsm12b	100	84.264	Lepisosteus_oculatus
ENSDNOG00000002418	LSM12	91	99.487	ENSLAFG00000005202	LSM12	100	99.487	Loxodonta_africana
ENSDNOG00000002418	LSM12	91	99.487	ENSMFAG00000031376	LSM12	100	99.487	Macaca_fascicularis
ENSDNOG00000002418	LSM12	59	85.057	ENSMMUG00000038408	-	100	85.057	Macaca_mulatta
ENSDNOG00000002418	LSM12	59	85.057	ENSMMUG00000042106	-	100	85.057	Macaca_mulatta
ENSDNOG00000002418	LSM12	91	99.487	ENSMMUG00000006804	LSM12	100	99.487	Macaca_mulatta
ENSDNOG00000002418	LSM12	91	99.487	ENSMNEG00000030594	-	100	99.487	Macaca_nemestrina
ENSDNOG00000002418	LSM12	91	99.487	ENSMLEG00000039934	LSM12	100	99.487	Mandrillus_leucophaeus
ENSDNOG00000002418	LSM12	91	85.204	ENSMAMG00000004279	lsm12b	100	85.204	Mastacembelus_armatus
ENSDNOG00000002418	LSM12	91	84.694	ENSMZEG00005005754	lsm12b	100	84.694	Maylandia_zebra
ENSDNOG00000002418	LSM12	91	98.974	ENSMICG00000037219	LSM12	100	98.974	Microcebus_murinus
ENSDNOG00000002418	LSM12	99	81.043	ENSMOCG00000017015	-	88	83.920	Microtus_ochrogaster
ENSDNOG00000002418	LSM12	91	99.487	ENSMOCG00000019878	-	100	99.487	Microtus_ochrogaster
ENSDNOG00000002418	LSM12	91	85.204	ENSMMOG00000020848	lsm12b	100	85.204	Mola_mola
ENSDNOG00000002418	LSM12	91	85.204	ENSMALG00000007578	lsm12b	100	85.204	Monopterus_albus
ENSDNOG00000002418	LSM12	91	98.974	MGP_CAROLIEiJ_G0017241	Lsm12	100	98.974	Mus_caroli
ENSDNOG00000002418	LSM12	91	99.487	ENSMUSG00000020922	Lsm12	100	99.487	Mus_musculus
ENSDNOG00000002418	LSM12	91	91.509	MGP_PahariEiJ_G0018371	Lsm12	100	91.509	Mus_pahari
ENSDNOG00000002418	LSM12	91	98.974	MGP_SPRETEiJ_G0018084	Lsm12	100	98.974	Mus_spretus
ENSDNOG00000002418	LSM12	91	98.974	ENSMLUG00000006391	LSM12	100	98.974	Myotis_lucifugus
ENSDNOG00000002418	LSM12	91	99.487	ENSNGAG00000001870	Lsm12	100	99.487	Nannospalax_galili
ENSDNOG00000002418	LSM12	91	66.832	ENSNGAG00000015429	-	100	66.832	Nannospalax_galili
ENSDNOG00000002418	LSM12	91	84.694	ENSNBRG00000006266	lsm12b	100	84.694	Neolamprologus_brichardi
ENSDNOG00000002418	LSM12	91	99.487	ENSNLEG00000005580	-	100	99.487	Nomascus_leucogenys
ENSDNOG00000002418	LSM12	77	98.788	ENSMEUG00000007501	-	100	98.788	Notamacropus_eugenii
ENSDNOG00000002418	LSM12	91	99.487	ENSOPRG00000008552	LSM12	100	99.487	Ochotona_princeps
ENSDNOG00000002418	LSM12	91	97.949	ENSODEG00000017998	-	100	97.949	Octodon_degus
ENSDNOG00000002418	LSM12	91	88.205	ENSODEG00000007886	-	74	88.205	Octodon_degus
ENSDNOG00000002418	LSM12	91	84.694	ENSONIG00000007933	lsm12b	100	84.694	Oreochromis_niloticus
ENSDNOG00000002418	LSM12	91	91.753	ENSOCUG00000024823	-	100	91.753	Oryctolagus_cuniculus
ENSDNOG00000002418	LSM12	91	92.784	ENSOCUG00000027889	-	100	92.784	Oryctolagus_cuniculus
ENSDNOG00000002418	LSM12	91	97.475	ENSOCUG00000008566	-	100	97.475	Oryctolagus_cuniculus
ENSDNOG00000002418	LSM12	91	92.784	ENSOCUG00000021254	-	100	92.784	Oryctolagus_cuniculus
ENSDNOG00000002418	LSM12	91	85.204	ENSORLG00000011310	lsm12b	100	85.204	Oryzias_latipes
ENSDNOG00000002418	LSM12	99	79.630	ENSORLG00020002060	lsm12b	96	83.415	Oryzias_latipes_hni
ENSDNOG00000002418	LSM12	99	79.630	ENSORLG00015001647	lsm12b	96	83.415	Oryzias_latipes_hsok
ENSDNOG00000002418	LSM12	92	85.279	ENSOMEG00000006184	lsm12b	92	85.279	Oryzias_melastigma
ENSDNOG00000002418	LSM12	91	98.974	ENSOGAG00000010489	LSM12	100	98.974	Otolemur_garnettii
ENSDNOG00000002418	LSM12	91	96.020	ENSOARG00000006589	LSM12	100	96.020	Ovis_aries
ENSDNOG00000002418	LSM12	91	89.231	ENSPPAG00000034974	-	92	100.000	Pan_paniscus
ENSDNOG00000002418	LSM12	91	99.487	ENSPPRG00000023420	LSM12	100	99.487	Panthera_pardus
ENSDNOG00000002418	LSM12	66	96.364	ENSPTIG00000014850	-	100	96.364	Panthera_tigris_altaica
ENSDNOG00000002418	LSM12	71	99.346	ENSPTIG00000012704	-	82	99.346	Panthera_tigris_altaica
ENSDNOG00000002418	LSM12	91	99.487	ENSPTRG00000009261	LSM12	100	99.487	Pan_troglodytes
ENSDNOG00000002418	LSM12	91	99.487	ENSPANG00000021315	-	100	99.487	Papio_anubis
ENSDNOG00000002418	LSM12	91	86.224	ENSPKIG00000021058	lsm12b	100	86.224	Paramormyrops_kingsleyae
ENSDNOG00000002418	LSM12	91	76.804	ENSPKIG00000017932	-	99	76.804	Paramormyrops_kingsleyae
ENSDNOG00000002418	LSM12	91	84.694	ENSPMGG00000021344	lsm12b	100	84.694	Periophthalmus_magnuspinnatus
ENSDNOG00000002418	LSM12	91	99.487	ENSPEMG00000012199	Lsm12	100	99.487	Peromyscus_maniculatus_bairdii
ENSDNOG00000002418	LSM12	80	66.279	ENSPMAG00000005461	lsm12a	99	66.279	Petromyzon_marinus
ENSDNOG00000002418	LSM12	91	97.436	ENSPCIG00000020244	LSM12	100	97.436	Phascolarctos_cinereus
ENSDNOG00000002418	LSM12	91	83.163	ENSPFOG00000015930	lsm12b	100	83.163	Poecilia_formosa
ENSDNOG00000002418	LSM12	91	83.163	ENSPLAG00000021089	lsm12b	100	83.163	Poecilia_latipinna
ENSDNOG00000002418	LSM12	91	83.163	ENSPMEG00000012961	lsm12b	100	83.163	Poecilia_mexicana
ENSDNOG00000002418	LSM12	80	85.380	ENSPREG00000010236	lsm12b	95	85.380	Poecilia_reticulata
ENSDNOG00000002418	LSM12	91	99.487	ENSPPYG00000008344	LSM12	100	99.487	Pongo_abelii
ENSDNOG00000002418	LSM12	74	98.742	ENSPCAG00000008790	LSM12	100	98.742	Procavia_capensis
ENSDNOG00000002418	LSM12	91	99.487	ENSPCOG00000027951	LSM12	100	99.487	Propithecus_coquereli
ENSDNOG00000002418	LSM12	91	98.974	ENSPVAG00000013706	LSM12	100	98.974	Pteropus_vampyrus
ENSDNOG00000002418	LSM12	91	84.694	ENSPNYG00000003386	lsm12b	100	84.694	Pundamilia_nyererei
ENSDNOG00000002418	LSM12	91	77.041	ENSPNAG00000018435	lsm12a	100	77.041	Pygocentrus_nattereri
ENSDNOG00000002418	LSM12	91	83.163	ENSPNAG00000004186	lsm12b	100	83.163	Pygocentrus_nattereri
ENSDNOG00000002418	LSM12	91	99.487	ENSRNOG00000020894	Lsm12	100	99.487	Rattus_norvegicus
ENSDNOG00000002418	LSM12	91	99.487	ENSRBIG00000027910	LSM12	100	99.487	Rhinopithecus_bieti
ENSDNOG00000002418	LSM12	91	99.487	ENSRROG00000045530	-	100	99.487	Rhinopithecus_roxellana
ENSDNOG00000002418	LSM12	91	60.000	ENSRROG00000000537	-	100	60.000	Rhinopithecus_roxellana
ENSDNOG00000002418	LSM12	91	99.487	ENSSBOG00000025310	LSM12	100	99.487	Saimiri_boliviensis_boliviensis
ENSDNOG00000002418	LSM12	74	94.937	ENSSHAG00000014914	LSM12	100	94.937	Sarcophilus_harrisii
ENSDNOG00000002418	LSM12	91	86.224	ENSSFOG00015009612	lsm12	100	86.224	Scleropages_formosus
ENSDNOG00000002418	LSM12	91	83.163	ENSSFOG00015020392	lsm12a	100	83.163	Scleropages_formosus
ENSDNOG00000002418	LSM12	91	85.204	ENSSMAG00000008089	lsm12b	100	85.204	Scophthalmus_maximus
ENSDNOG00000002418	LSM12	91	86.224	ENSSDUG00000012711	lsm12b	100	86.224	Seriola_dumerili
ENSDNOG00000002418	LSM12	91	86.224	ENSSLDG00000007404	lsm12b	100	86.224	Seriola_lalandi_dorsalis
ENSDNOG00000002418	LSM12	71	98.693	ENSSARG00000005537	LSM12	100	98.693	Sorex_araneus
ENSDNOG00000002418	LSM12	90	95.337	ENSSPUG00000011984	LSM12	99	95.337	Sphenodon_punctatus
ENSDNOG00000002418	LSM12	91	85.714	ENSSPAG00000017058	lsm12b	100	85.714	Stegastes_partitus
ENSDNOG00000002418	LSM12	91	99.487	ENSSSCG00000032394	LSM12	100	99.487	Sus_scrofa
ENSDNOG00000002418	LSM12	91	84.184	ENSTRUG00000007121	lsm12b	100	84.184	Takifugu_rubripes
ENSDNOG00000002418	LSM12	91	84.694	ENSTNIG00000014436	lsm12b	100	84.694	Tetraodon_nigroviridis
ENSDNOG00000002418	LSM12	91	95.897	ENSTBEG00000012392	-	100	95.897	Tupaia_belangeri
ENSDNOG00000002418	LSM12	91	98.974	ENSTBEG00000012523	-	100	98.974	Tupaia_belangeri
ENSDNOG00000002418	LSM12	91	99.487	ENSTTRG00000010433	LSM12	100	99.487	Tursiops_truncatus
ENSDNOG00000002418	LSM12	91	99.487	ENSUAMG00000006313	LSM12	100	99.487	Ursus_americanus
ENSDNOG00000002418	LSM12	74	96.203	ENSUMAG00000012987	LSM12	90	96.203	Ursus_maritimus
ENSDNOG00000002418	LSM12	91	93.846	ENSVPAG00000011145	LSM12	100	93.846	Vicugna_pacos
ENSDNOG00000002418	LSM12	91	99.487	ENSVVUG00000017581	LSM12	100	99.487	Vulpes_vulpes
ENSDNOG00000002418	LSM12	75	65.000	ENSXETG00000003371	lsm12	77	65.000	Xenopus_tropicalis
ENSDNOG00000002418	LSM12	91	84.184	ENSXCOG00000003994	lsm12b	100	84.184	Xiphophorus_couchianus
ENSDNOG00000002418	LSM12	91	84.184	ENSXMAG00000020950	lsm12b	100	84.184	Xiphophorus_maculatus