EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000003247 (Gene tree)
Gene ID: 101436853
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 178265 bases
Position: chrJH568325.1:342680-520944
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000030556	Ago_hook	PF10427.9	4.9e-23	1	1
ENSDNOP00000002521	Ago_hook	PF10427.9	5.4e-23	1	1
ENSDNOP00000027868	Ago_hook	PF10427.9	7.4e-23	1	1
ENSDNOP00000030556	RRM_1	PF00076.22	0.00022	1	1
ENSDNOP00000002521	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000003257	TNRC6C-202	5846	-	ENSDNOP00000002521	1891 (aa)	-	UPI0003CBFEFD
ENSDNOT00000033223	TNRC6C-201	6132	-	ENSDNOP00000027868	2040 (aa)	-	UPI0003CC164D
ENSDNOT00000031735	TNRC6C-203	5696	-	ENSDNOP00000030556	1841 (aa)	-	UPI0003CBEB17

Gene Model

Click here to download ENSDNOG00000003247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000003247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000003247	TNRC6C	98	35.700	ENSDNOG00000012744	TNRC6B	99	36.386
ENSDNOG00000003247	TNRC6C	99	41.983	ENSDNOG00000013989	TNRC6A	99	41.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000003247	TNRC6C	99	89.553	ENSG00000078687	TNRC6C	100	91.671	Homo_sapiens
ENSDNOG00000003247	TNRC6C	93	53.474	ENSAPOG00000019749	tnrc6c1	99	48.456	Acanthochromis_polyacanthus
ENSDNOG00000003247	TNRC6C	95	88.099	ENSAMEG00000013756	TNRC6C	99	88.029	Ailuropoda_melanoleuca
ENSDNOG00000003247	TNRC6C	95	47.800	ENSACIG00000008075	tnrc6c1	79	53.315	Amphilophus_citrinellus
ENSDNOG00000003247	TNRC6C	70	67.200	ENSAOCG00000023968	tnrc6c1	99	49.557	Amphiprion_ocellaris
ENSDNOG00000003247	TNRC6C	72	55.252	ENSAPEG00000009020	tnrc6c1	99	49.557	Amphiprion_percula
ENSDNOG00000003247	TNRC6C	99	85.062	ENSAPLG00000005456	TNRC6C	100	84.647	Anas_platyrhynchos
ENSDNOG00000003247	TNRC6C	99	84.576	ENSACAG00000016198	TNRC6C	98	85.251	Anolis_carolinensis
ENSDNOG00000003247	TNRC6C	99	88.773	ENSANAG00000021554	TNRC6C	100	88.453	Aotus_nancymaae
ENSDNOG00000003247	TNRC6C	95	47.594	ENSACLG00000000424	tnrc6c1	99	47.890	Astatotilapia_calliptera
ENSDNOG00000003247	TNRC6C	96	89.885	ENSBTAG00000018658	TNRC6C	100	86.979	Bos_taurus
ENSDNOG00000003247	TNRC6C	99	88.669	ENSCJAG00000019431	TNRC6C	100	88.337	Callithrix_jacchus
ENSDNOG00000003247	TNRC6C	99	88.401	ENSCAFG00000005224	TNRC6C	99	88.349	Canis_familiaris
ENSDNOG00000003247	TNRC6C	99	87.741	ENSCAFG00020006661	TNRC6C	100	87.203	Canis_lupus_dingo
ENSDNOG00000003247	TNRC6C	99	84.801	ENSCHIG00000026004	TNRC6C	100	86.575	Capra_hircus
ENSDNOG00000003247	TNRC6C	91	91.782	ENSTSYG00000005403	TNRC6C	100	91.725	Carlito_syrichta
ENSDNOG00000003247	TNRC6C	98	79.498	ENSCAPG00000007307	TNRC6C	99	79.634	Cavia_aperea
ENSDNOG00000003247	TNRC6C	99	84.475	ENSCPOG00000000467	TNRC6C	100	86.277	Cavia_porcellus
ENSDNOG00000003247	TNRC6C	99	89.085	ENSCCAG00000030524	TNRC6C	100	91.209	Cebus_capucinus
ENSDNOG00000003247	TNRC6C	99	88.981	ENSCATG00000033135	TNRC6C	100	91.151	Cercocebus_atys
ENSDNOG00000003247	TNRC6C	99	86.736	ENSCLAG00000011139	TNRC6C	99	86.762	Chinchilla_lanigera
ENSDNOG00000003247	TNRC6C	99	89.405	ENSCSAG00000005167	TNRC6C	99	89.405	Chlorocebus_sabaeus
ENSDNOG00000003247	TNRC6C	71	91.597	ENSCHOG00000000088	TNRC6C	75	91.597	Choloepus_hoffmanni
ENSDNOG00000003247	TNRC6C	95	86.551	ENSCPBG00000027960	TNRC6C	100	87.835	Chrysemys_picta_bellii
ENSDNOG00000003247	TNRC6C	99	88.825	ENSCANG00000041771	TNRC6C	100	91.093	Colobus_angolensis_palliatus
ENSDNOG00000003247	TNRC6C	99	83.933	ENSCGRG00001022686	Tnrc6c	100	84.456	Cricetulus_griseus_chok1gshd
ENSDNOG00000003247	TNRC6C	99	84.257	ENSCGRG00000018041	Tnrc6c	100	84.456	Cricetulus_griseus_crigri
ENSDNOG00000003247	TNRC6C	72	53.101	ENSCSEG00000012744	tnrc6c1	98	48.324	Cynoglossus_semilaevis
ENSDNOG00000003247	TNRC6C	99	50.296	ENSDARG00000076847	tnrc6c1	96	55.191	Danio_rerio
ENSDNOG00000003247	TNRC6C	98	81.178	ENSDORG00000004558	Tnrc6c	100	83.247	Dipodomys_ordii
ENSDNOG00000003247	TNRC6C	84	80.387	ENSETEG00000005527	TNRC6C	90	80.387	Echinops_telfairi
ENSDNOG00000003247	TNRC6C	91	88.535	ENSEASG00005004799	TNRC6C	100	88.477	Equus_asinus_asinus
ENSDNOG00000003247	TNRC6C	99	88.214	ENSECAG00000012486	TNRC6C	99	87.899	Equus_caballus
ENSDNOG00000003247	TNRC6C	90	91.371	ENSEEUG00000010008	TNRC6C	96	91.371	Erinaceus_europaeus
ENSDNOG00000003247	TNRC6C	99	85.952	ENSFCAG00000028358	TNRC6C	100	86.532	Felis_catus
ENSDNOG00000003247	TNRC6C	91	86.451	ENSFALG00000000848	TNRC6C	100	85.828	Ficedula_albicollis
ENSDNOG00000003247	TNRC6C	94	87.852	ENSFDAG00000010368	TNRC6C	100	88.076	Fukomys_damarensis
ENSDNOG00000003247	TNRC6C	94	70.233	ENSFHEG00000002936	tnrc6c1	100	48.889	Fundulus_heteroclitus
ENSDNOG00000003247	TNRC6C	95	88.199	ENSGALG00000001725	TNRC6C	100	87.657	Gallus_gallus
ENSDNOG00000003247	TNRC6C	99	48.860	ENSGAFG00000019019	tnrc6c1	100	48.517	Gambusia_affinis
ENSDNOG00000003247	TNRC6C	87	51.507	ENSGACG00000012320	tnrc6c1	99	45.848	Gasterosteus_aculeatus
ENSDNOG00000003247	TNRC6C	95	88.009	ENSGAGG00000022043	TNRC6C	99	88.137	Gopherus_agassizii
ENSDNOG00000003247	TNRC6C	99	88.883	ENSGGOG00000011304	TNRC6C	100	90.809	Gorilla_gorilla
ENSDNOG00000003247	TNRC6C	97	46.181	ENSHBUG00000010846	tnrc6c1	99	48.091	Haplochromis_burtoni
ENSDNOG00000003247	TNRC6C	99	86.290	ENSHGLG00000004809	TNRC6C	99	86.342	Heterocephalus_glaber_female
ENSDNOG00000003247	TNRC6C	99	85.409	ENSHGLG00100012597	TNRC6C	99	85.774	Heterocephalus_glaber_male
ENSDNOG00000003247	TNRC6C	99	51.022	ENSIPUG00000000818	tnrc6c1	98	51.164	Ictalurus_punctatus
ENSDNOG00000003247	TNRC6C	99	84.528	ENSSTOG00000009101	TNRC6C	100	86.581	Ictidomys_tridecemlineatus
ENSDNOG00000003247	TNRC6C	99	82.814	ENSJJAG00000017055	Tnrc6c	99	82.503	Jaculus_jaculus
ENSDNOG00000003247	TNRC6C	98	49.888	ENSKMAG00000021023	tnrc6c1	97	50.269	Kryptolebias_marmoratus
ENSDNOG00000003247	TNRC6C	94	73.884	ENSLACG00000015283	TNRC6C	100	73.564	Latimeria_chalumnae
ENSDNOG00000003247	TNRC6C	99	76.391	ENSLOCG00000013377	tnrc6c1	99	69.758	Lepisosteus_oculatus
ENSDNOG00000003247	TNRC6C	99	86.383	ENSLAFG00000011122	TNRC6C	99	88.122	Loxodonta_africana
ENSDNOG00000003247	TNRC6C	99	88.958	ENSMFAG00000043943	TNRC6C	100	91.209	Macaca_fascicularis
ENSDNOG00000003247	TNRC6C	99	89.416	ENSMMUG00000011924	TNRC6C	100	88.915	Macaca_mulatta
ENSDNOG00000003247	TNRC6C	99	89.033	ENSMNEG00000030405	TNRC6C	100	88.915	Macaca_nemestrina
ENSDNOG00000003247	TNRC6C	99	88.981	ENSMLEG00000033436	TNRC6C	100	91.151	Mandrillus_leucophaeus
ENSDNOG00000003247	TNRC6C	95	54.787	ENSMAMG00000023613	tnrc6c1	97	52.289	Mastacembelus_armatus
ENSDNOG00000003247	TNRC6C	97	47.110	ENSMZEG00005010920	tnrc6c1	99	47.890	Maylandia_zebra
ENSDNOG00000003247	TNRC6C	99	78.734	ENSMGAG00000003906	TNRC6C	100	78.557	Meleagris_gallopavo
ENSDNOG00000003247	TNRC6C	91	85.435	ENSMAUG00000021618	Tnrc6c	100	85.204	Mesocricetus_auratus
ENSDNOG00000003247	TNRC6C	99	89.080	ENSMICG00000003952	TNRC6C	100	91.035	Microcebus_murinus
ENSDNOG00000003247	TNRC6C	99	85.239	ENSMOCG00000015879	Tnrc6c	100	87.184	Microtus_ochrogaster
ENSDNOG00000003247	TNRC6C	72	53.647	ENSMMOG00000005203	tnrc6c1	97	49.477	Mola_mola
ENSDNOG00000003247	TNRC6C	99	83.221	ENSMODG00000001785	TNRC6C	99	82.909	Monodelphis_domestica
ENSDNOG00000003247	TNRC6C	99	84.823	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	86.903	Mus_caroli
ENSDNOG00000003247	TNRC6C	99	84.563	ENSMUSG00000025571	Tnrc6c	100	86.622	Mus_musculus
ENSDNOG00000003247	TNRC6C	99	84.719	MGP_PahariEiJ_G0018593	Tnrc6c	100	86.790	Mus_pahari
ENSDNOG00000003247	TNRC6C	99	84.651	MGP_SPRETEiJ_G0018309	Tnrc6c	100	86.678	Mus_spretus
ENSDNOG00000003247	TNRC6C	99	85.752	ENSMPUG00000013348	TNRC6C	99	85.729	Mustela_putorius_furo
ENSDNOG00000003247	TNRC6C	99	79.526	ENSMLUG00000014431	TNRC6C	99	79.524	Myotis_lucifugus
ENSDNOG00000003247	TNRC6C	99	84.659	ENSNGAG00000012203	Tnrc6c	99	84.451	Nannospalax_galili
ENSDNOG00000003247	TNRC6C	95	48.329	ENSNBRG00000005344	tnrc6c1	99	48.278	Neolamprologus_brichardi
ENSDNOG00000003247	TNRC6C	98	86.959	ENSNLEG00000000047	TNRC6C	99	86.802	Nomascus_leucogenys
ENSDNOG00000003247	TNRC6C	92	79.207	ENSMEUG00000005104	TNRC6C	99	89.583	Notamacropus_eugenii
ENSDNOG00000003247	TNRC6C	91	88.079	ENSODEG00000012499	TNRC6C	100	88.252	Octodon_degus
ENSDNOG00000003247	TNRC6C	89	48.678	ENSONIG00000002210	tnrc6c1	96	53.506	Oreochromis_niloticus
ENSDNOG00000003247	TNRC6C	99	58.715	ENSOANG00000009758	-	100	58.633	Ornithorhynchus_anatinus
ENSDNOG00000003247	TNRC6C	80	86.926	ENSOCUG00000006122	TNRC6C	94	72.644	Oryctolagus_cuniculus
ENSDNOG00000003247	TNRC6C	95	47.917	ENSORLG00000009837	tnrc6c1	100	67.658	Oryzias_latipes
ENSDNOG00000003247	TNRC6C	95	48.879	ENSORLG00020016510	tnrc6c1	100	49.526	Oryzias_latipes_hni
ENSDNOG00000003247	TNRC6C	75	44.227	ENSORLG00015000171	tnrc6c1	98	44.864	Oryzias_latipes_hsok
ENSDNOG00000003247	TNRC6C	95	48.667	ENSOMEG00000000357	tnrc6c1	99	49.151	Oryzias_melastigma
ENSDNOG00000003247	TNRC6C	91	89.931	ENSOGAG00000007197	TNRC6C	100	90.162	Otolemur_garnettii
ENSDNOG00000003247	TNRC6C	95	81.651	ENSOARG00000006041	TNRC6C	98	82.097	Ovis_aries
ENSDNOG00000003247	TNRC6C	99	89.213	ENSPPAG00000027160	TNRC6C	100	91.324	Pan_paniscus
ENSDNOG00000003247	TNRC6C	99	86.004	ENSPPRG00000018881	TNRC6C	100	86.590	Panthera_pardus
ENSDNOG00000003247	TNRC6C	90	73.319	ENSPTIG00000008791	TNRC6C	91	75.946	Panthera_tigris_altaica
ENSDNOG00000003247	TNRC6C	99	89.293	ENSPTRG00000009699	TNRC6C	100	91.324	Pan_troglodytes
ENSDNOG00000003247	TNRC6C	99	89.033	ENSPANG00000019994	TNRC6C	100	89.069	Papio_anubis
ENSDNOG00000003247	TNRC6C	88	52.632	ENSPKIG00000005428	tnrc6c1	100	50.968	Paramormyrops_kingsleyae
ENSDNOG00000003247	TNRC6C	94	84.157	ENSPSIG00000018069	TNRC6C	100	84.045	Pelodiscus_sinensis
ENSDNOG00000003247	TNRC6C	89	57.325	ENSPMGG00000022911	tnrc6c1	96	64.876	Periophthalmus_magnuspinnatus
ENSDNOG00000003247	TNRC6C	99	84.615	ENSPEMG00000009785	Tnrc6c	100	84.226	Peromyscus_maniculatus_bairdii
ENSDNOG00000003247	TNRC6C	53	85.861	ENSPCIG00000017421	-	99	85.758	Phascolarctos_cinereus
ENSDNOG00000003247	TNRC6C	100	49.073	ENSPFOG00000012560	tnrc6c1	97	59.361	Poecilia_formosa
ENSDNOG00000003247	TNRC6C	88	51.745	ENSPLAG00000021055	tnrc6c1	97	51.095	Poecilia_latipinna
ENSDNOG00000003247	TNRC6C	99	89.833	ENSPPYG00000008679	TNRC6C	99	89.959	Pongo_abelii
ENSDNOG00000003247	TNRC6C	88	85.033	ENSPCAG00000012510	TNRC6C	94	84.816	Procavia_capensis
ENSDNOG00000003247	TNRC6C	91	91.845	ENSPCOG00000021451	TNRC6C	100	91.787	Propithecus_coquereli
ENSDNOG00000003247	TNRC6C	90	92.373	ENSPVAG00000002008	TNRC6C	95	92.373	Pteropus_vampyrus
ENSDNOG00000003247	TNRC6C	96	47.579	ENSPNYG00000014477	tnrc6c1	99	48.248	Pundamilia_nyererei
ENSDNOG00000003247	TNRC6C	91	86.308	ENSRNOG00000022395	Tnrc6c	100	86.308	Rattus_norvegicus
ENSDNOG00000003247	TNRC6C	99	88.953	ENSRBIG00000027777	TNRC6C	100	91.151	Rhinopithecus_bieti
ENSDNOG00000003247	TNRC6C	99	89.033	ENSRROG00000042912	TNRC6C	100	91.209	Rhinopithecus_roxellana
ENSDNOG00000003247	TNRC6C	99	88.410	ENSSBOG00000023981	TNRC6C	100	90.515	Saimiri_boliviensis_boliviensis
ENSDNOG00000003247	TNRC6C	81	59.713	ENSSFOG00015004735	-	99	59.750	Scleropages_formosus
ENSDNOG00000003247	TNRC6C	92	56.759	ENSSFOG00015006475	tnrc6c1	100	51.310	Scleropages_formosus
ENSDNOG00000003247	TNRC6C	96	47.534	ENSSMAG00000012761	tnrc6c1	99	49.309	Scophthalmus_maximus
ENSDNOG00000003247	TNRC6C	95	48.831	ENSSDUG00000002366	tnrc6c1	98	49.811	Seriola_dumerili
ENSDNOG00000003247	TNRC6C	85	49.703	ENSSLDG00000025613	tnrc6c1	97	50.115	Seriola_lalandi_dorsalis
ENSDNOG00000003247	TNRC6C	86	92.437	ENSSARG00000006816	TNRC6C	91	92.437	Sorex_araneus
ENSDNOG00000003247	TNRC6C	79	86.190	ENSSPUG00000007341	TNRC6C	95	85.843	Sphenodon_punctatus
ENSDNOG00000003247	TNRC6C	94	53.490	ENSSPAG00000014977	tnrc6c1	97	49.415	Stegastes_partitus
ENSDNOG00000003247	TNRC6C	88	89.437	ENSSSCG00000034373	TNRC6C	100	91.220	Sus_scrofa
ENSDNOG00000003247	TNRC6C	94	86.300	ENSTGUG00000007733	TNRC6C	100	86.075	Taeniopygia_guttata
ENSDNOG00000003247	TNRC6C	89	52.732	ENSTRUG00000011685	tnrc6c1	100	49.440	Takifugu_rubripes
ENSDNOG00000003247	TNRC6C	90	52.146	ENSTNIG00000005273	tnrc6c1	100	61.144	Tetraodon_nigroviridis
ENSDNOG00000003247	TNRC6C	59	82.346	ENSTBEG00000005046	TNRC6C	95	83.192	Tupaia_belangeri
ENSDNOG00000003247	TNRC6C	94	88.539	ENSTTRG00000010828	TNRC6C	99	88.315	Tursiops_truncatus
ENSDNOG00000003247	TNRC6C	99	85.796	ENSUMAG00000013614	TNRC6C	99	86.115	Ursus_maritimus
ENSDNOG00000003247	TNRC6C	91	90.221	ENSVVUG00000015268	TNRC6C	100	90.221	Vulpes_vulpes
ENSDNOG00000003247	TNRC6C	91	72.117	ENSXETG00000019470	tnrc6c	100	71.945	Xenopus_tropicalis
ENSDNOG00000003247	TNRC6C	99	47.418	ENSXMAG00000025971	tnrc6c1	99	49.445	Xiphophorus_maculatus