EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000004176 (Gene tree)
Gene ID: 101415440
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 140195 bases
Position: chrJH562036.1:556074-696268
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000003229	ResIII	PF04851.15	6.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000004191	CHD6-201	8807	-	ENSDNOP00000003229	2720 (aa)	-	UPI0003CC040F

Gene Model

Click here to download ENSDNOG00000004176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000004176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000004176	CHD6	74	67.059	ENSDNOG00000011674	CHD7	71	64.579
ENSDNOG00000004176	CHD6	77	64.615	ENSDNOG00000006045	CHD9	85	66.550
ENSDNOG00000004176	CHD6	58	61.932	ENSDNOG00000005838	CHD8	59	63.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000004176	CHD6	99	90.859	ENSG00000124177	CHD6	99	99.225	Homo_sapiens
ENSDNOG00000004176	CHD6	74	76.200	ENSAPOG00000013736	chd6	64	76.368	Acanthochromis_polyacanthus
ENSDNOG00000004176	CHD6	99	90.262	ENSAMEG00000009496	CHD6	99	90.262	Ailuropoda_melanoleuca
ENSDNOG00000004176	CHD6	74	76.035	ENSATEG00000005608	chd6	62	77.220	Anabas_testudineus
ENSDNOG00000004176	CHD6	68	78.911	ENSAPLG00000015592	CHD6	100	72.495	Anas_platyrhynchos
ENSDNOG00000004176	CHD6	99	67.568	ENSACAG00000006842	CHD6	99	68.425	Anolis_carolinensis
ENSDNOG00000004176	CHD6	99	90.269	ENSANAG00000037548	CHD6	99	92.844	Aotus_nancymaae
ENSDNOG00000004176	CHD6	79	71.230	ENSAMXG00000009576	chd6	74	72.085	Astyanax_mexicanus
ENSDNOG00000004176	CHD6	99	86.694	ENSBTAG00000005733	CHD6	99	86.694	Bos_taurus
ENSDNOG00000004176	CHD6	99	90.269	ENSCJAG00000017920	CHD6	99	92.661	Callithrix_jacchus
ENSDNOG00000004176	CHD6	99	90.077	ENSCAFG00000009236	CHD6	99	90.077	Canis_familiaris
ENSDNOG00000004176	CHD6	99	89.478	ENSCAFG00020012906	CHD6	99	96.078	Canis_lupus_dingo
ENSDNOG00000004176	CHD6	99	86.436	ENSCHIG00000017606	CHD6	100	85.777	Capra_hircus
ENSDNOG00000004176	CHD6	84	89.580	ENSTSYG00000014635	CHD6	100	89.580	Carlito_syrichta
ENSDNOG00000004176	CHD6	99	89.229	ENSCPOG00000015641	CHD6	99	89.229	Cavia_porcellus
ENSDNOG00000004176	CHD6	99	90.564	ENSCCAG00000036828	CHD6	99	92.844	Cebus_capucinus
ENSDNOG00000004176	CHD6	99	90.269	ENSCATG00000039248	CHD6	99	92.844	Cercocebus_atys
ENSDNOG00000004176	CHD6	99	89.142	ENSCLAG00000013743	CHD6	99	89.142	Chinchilla_lanigera
ENSDNOG00000004176	CHD6	99	90.638	ENSCSAG00000013997	CHD6	99	90.638	Chlorocebus_sabaeus
ENSDNOG00000004176	CHD6	91	91.224	ENSCHOG00000012647	CHD6	95	91.224	Choloepus_hoffmanni
ENSDNOG00000004176	CHD6	99	73.387	ENSCPBG00000019382	CHD6	99	73.830	Chrysemys_picta_bellii
ENSDNOG00000004176	CHD6	99	90.748	ENSCANG00000043435	CHD6	99	92.844	Colobus_angolensis_palliatus
ENSDNOG00000004176	CHD6	99	87.422	ENSCGRG00001002694	Chd6	99	87.422	Cricetulus_griseus_chok1gshd
ENSDNOG00000004176	CHD6	78	76.779	ENSDARG00000017244	chd6	76	76.478	Danio_rerio
ENSDNOG00000004176	CHD6	99	90.503	ENSEASG00005023433	CHD6	95	97.297	Equus_asinus_asinus
ENSDNOG00000004176	CHD6	99	91.110	ENSECAG00000011761	CHD6	99	91.110	Equus_caballus
ENSDNOG00000004176	CHD6	70	79.893	ENSELUG00000012309	chd6	89	79.985	Esox_lucius
ENSDNOG00000004176	CHD6	99	89.635	ENSFCAG00000003572	CHD6	99	89.635	Felis_catus
ENSDNOG00000004176	CHD6	93	77.713	ENSFALG00000012563	CHD6	93	78.032	Ficedula_albicollis
ENSDNOG00000004176	CHD6	99	89.130	ENSFDAG00000013791	CHD6	99	89.130	Fukomys_damarensis
ENSDNOG00000004176	CHD6	74	69.494	ENSGMOG00000011715	chd6	84	69.643	Gadus_morhua
ENSDNOG00000004176	CHD6	78	71.569	ENSGACG00000000037	chd6	86	69.911	Gasterosteus_aculeatus
ENSDNOG00000004176	CHD6	99	90.822	ENSGGOG00000013123	CHD6	99	92.844	Gorilla_gorilla
ENSDNOG00000004176	CHD6	78	72.180	ENSHBUG00000014701	chd6	63	75.685	Haplochromis_burtoni
ENSDNOG00000004176	CHD6	99	89.454	ENSHGLG00000004548	CHD6	99	89.491	Heterocephalus_glaber_female
ENSDNOG00000004176	CHD6	99	89.454	ENSHGLG00100006401	CHD6	99	89.491	Heterocephalus_glaber_male
ENSDNOG00000004176	CHD6	76	77.446	ENSIPUG00000003692	chd6	73	77.250	Ictalurus_punctatus
ENSDNOG00000004176	CHD6	99	89.819	ENSSTOG00000013382	CHD6	99	89.819	Ictidomys_tridecemlineatus
ENSDNOG00000004176	CHD6	82	78.593	ENSLACG00000010881	CHD6	81	78.450	Latimeria_chalumnae
ENSDNOG00000004176	CHD6	73	80.709	ENSLOCG00000007386	chd6	84	75.502	Lepisosteus_oculatus
ENSDNOG00000004176	CHD6	99	91.258	ENSLAFG00000012144	CHD6	100	90.926	Loxodonta_africana
ENSDNOG00000004176	CHD6	99	90.638	ENSMFAG00000032830	CHD6	99	92.844	Macaca_fascicularis
ENSDNOG00000004176	CHD6	99	90.638	ENSMMUG00000020458	CHD6	99	92.844	Macaca_mulatta
ENSDNOG00000004176	CHD6	99	90.638	ENSMNEG00000040847	CHD6	99	92.844	Macaca_nemestrina
ENSDNOG00000004176	CHD6	99	90.597	ENSMLEG00000031965	CHD6	99	92.844	Mandrillus_leucophaeus
ENSDNOG00000004176	CHD6	74	71.889	ENSMAMG00000013111	chd6	63	76.340	Mastacembelus_armatus
ENSDNOG00000004176	CHD6	99	71.633	ENSMGAG00000001121	CHD6	99	72.383	Meleagris_gallopavo
ENSDNOG00000004176	CHD6	99	90.004	ENSMICG00000016641	CHD6	99	92.110	Microcebus_murinus
ENSDNOG00000004176	CHD6	89	80.091	ENSMODG00000000720	-	100	80.091	Monodelphis_domestica
ENSDNOG00000004176	CHD6	99	85.799	MGP_CAROLIEiJ_G0024604	Chd6	99	93.957	Mus_caroli
ENSDNOG00000004176	CHD6	99	86.057	ENSMUSG00000057133	Chd6	99	93.872	Mus_musculus
ENSDNOG00000004176	CHD6	99	86.020	MGP_PahariEiJ_G0026048	Chd6	99	94.298	Mus_pahari
ENSDNOG00000004176	CHD6	99	86.020	MGP_SPRETEiJ_G0025526	Chd6	99	93.957	Mus_spretus
ENSDNOG00000004176	CHD6	99	88.631	ENSMPUG00000017695	CHD6	99	88.595	Mustela_putorius_furo
ENSDNOG00000004176	CHD6	99	89.450	ENSMLUG00000016247	CHD6	99	89.450	Myotis_lucifugus
ENSDNOG00000004176	CHD6	79	73.451	ENSNBRG00000013839	chd6	79	72.505	Neolamprologus_brichardi
ENSDNOG00000004176	CHD6	99	89.439	ENSNLEG00000006496	CHD6	99	89.392	Nomascus_leucogenys
ENSDNOG00000004176	CHD6	99	85.098	ENSOPRG00000013376	-	99	85.098	Ochotona_princeps
ENSDNOG00000004176	CHD6	84	75.032	ENSONIG00000000393	chd6	85	74.317	Oreochromis_niloticus
ENSDNOG00000004176	CHD6	99	69.723	ENSOANG00000014347	CHD6	99	69.476	Ornithorhynchus_anatinus
ENSDNOG00000004176	CHD6	99	87.274	ENSOCUG00000012394	CHD6	99	87.274	Oryctolagus_cuniculus
ENSDNOG00000004176	CHD6	76	72.768	ENSORLG00020021891	chd6	95	85.571	Oryzias_latipes_hni
ENSDNOG00000004176	CHD6	99	88.059	ENSOGAG00000002427	CHD6	99	88.012	Otolemur_garnettii
ENSDNOG00000004176	CHD6	99	84.267	ENSOARG00000002597	CHD6	99	84.267	Ovis_aries
ENSDNOG00000004176	CHD6	99	89.709	ENSPPRG00000014756	CHD6	99	89.709	Panthera_pardus
ENSDNOG00000004176	CHD6	99	89.598	ENSPTIG00000011094	CHD6	99	89.598	Panthera_tigris_altaica
ENSDNOG00000004176	CHD6	99	90.822	ENSPTRG00000013504	CHD6	99	92.844	Pan_troglodytes
ENSDNOG00000004176	CHD6	99	90.601	ENSPANG00000025554	CHD6	99	92.661	Papio_anubis
ENSDNOG00000004176	CHD6	77	76.794	ENSPKIG00000005578	chd6	79	72.793	Paramormyrops_kingsleyae
ENSDNOG00000004176	CHD6	77	76.655	ENSPMGG00000014877	chd6	88	76.600	Periophthalmus_magnuspinnatus
ENSDNOG00000004176	CHD6	99	79.279	ENSPCIG00000028037	CHD6	99	79.794	Phascolarctos_cinereus
ENSDNOG00000004176	CHD6	79	70.108	ENSPLAG00000003128	chd6	67	73.899	Poecilia_latipinna
ENSDNOG00000004176	CHD6	73	72.768	ENSPREG00000022653	chd6	99	86.264	Poecilia_reticulata
ENSDNOG00000004176	CHD6	99	90.973	ENSPPYG00000011016	CHD6	99	90.973	Pongo_abelii
ENSDNOG00000004176	CHD6	99	89.956	ENSPCOG00000001089	CHD6	99	92.661	Propithecus_coquereli
ENSDNOG00000004176	CHD6	79	74.774	ENSPNYG00000022516	chd6	78	74.515	Pundamilia_nyererei
ENSDNOG00000004176	CHD6	79	73.132	ENSPNAG00000012825	chd6	76	73.205	Pygocentrus_nattereri
ENSDNOG00000004176	CHD6	100	85.699	ENSRNOG00000016744	Chd6	99	85.551	Rattus_norvegicus
ENSDNOG00000004176	CHD6	99	90.158	ENSSBOG00000022089	CHD6	99	92.844	Saimiri_boliviensis_boliviensis
ENSDNOG00000004176	CHD6	99	79.245	ENSSHAG00000017072	CHD6	99	79.655	Sarcophilus_harrisii
ENSDNOG00000004176	CHD6	80	75.795	ENSSFOG00015012920	chd6	81	72.589	Scleropages_formosus
ENSDNOG00000004176	CHD6	58	100.000	ENSSARG00000002615	-	60	100.000	Sorex_araneus
ENSDNOG00000004176	CHD6	99	88.823	ENSSSCG00000007360	CHD6	99	89.818	Sus_scrofa
ENSDNOG00000004176	CHD6	90	79.989	ENSTGUG00000003179	CHD6	93	80.739	Taeniopygia_guttata
ENSDNOG00000004176	CHD6	73	77.373	ENSTNIG00000017487	chd6	82	77.373	Tetraodon_nigroviridis
ENSDNOG00000004176	CHD6	99	85.993	ENSTTRG00000013438	CHD6	99	85.993	Tursiops_truncatus
ENSDNOG00000004176	CHD6	99	89.077	ENSUAMG00000024036	CHD6	95	95.560	Ursus_americanus
ENSDNOG00000004176	CHD6	99	90.513	ENSUMAG00000002017	CHD6	95	95.560	Ursus_maritimus
ENSDNOG00000004176	CHD6	92	88.835	ENSVPAG00000007941	CHD6	93	88.904	Vicugna_pacos
ENSDNOG00000004176	CHD6	99	90.041	ENSVVUG00000029164	CHD6	99	90.041	Vulpes_vulpes
ENSDNOG00000004176	CHD6	99	60.561	ENSXETG00000021445	chd6	99	60.327	Xenopus_tropicalis