EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000004315 (Gene tree)
Gene ID: 101428598
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 134619 bases
Position: chrJH576138.1:104890-239508
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000003340	ResIII	PF04851.15	1.8e-11	1	1
ENSDNOP00000003340	DEAD	PF00270.29	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000004325	SMARCA1-201	4057	-	ENSDNOP00000003340	1036 (aa)	-	UPI0003CBDD8E

Gene Model

Click here to download ENSDNOG00000004315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000004315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000004315	SMARCA1	91	84.305	ENSDNOG00000009158	SMARCA5	91	84.046
ENSDNOG00000004315	SMARCA1	55	43.783	ENSDNOG00000019504	CHD1L	61	43.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000004315	SMARCA1	99	96.232	ENSG00000102038	SMARCA1	98	96.232	Homo_sapiens
ENSDNOG00000004315	SMARCA1	90	84.632	ENSAPOG00000016035	smarca5	96	84.831	Acanthochromis_polyacanthus
ENSDNOG00000004315	SMARCA1	99	94.556	ENSAMEG00000015218	SMARCA1	98	94.556	Ailuropoda_melanoleuca
ENSDNOG00000004315	SMARCA1	83	85.185	ENSACIG00000016982	smarca5	97	85.092	Amphilophus_citrinellus
ENSDNOG00000004315	SMARCA1	90	84.632	ENSAOCG00000015578	smarca5	93	83.540	Amphiprion_ocellaris
ENSDNOG00000004315	SMARCA1	90	84.632	ENSAPEG00000011117	smarca5	97	85.073	Amphiprion_percula
ENSDNOG00000004315	SMARCA1	94	81.828	ENSATEG00000012894	smarca5	95	82.551	Anabas_testudineus
ENSDNOG00000004315	SMARCA1	91	93.418	ENSAPLG00000013149	SMARCA1	97	93.103	Anas_platyrhynchos
ENSDNOG00000004315	SMARCA1	97	89.364	ENSACAG00000011376	SMARCA1	93	91.402	Anolis_carolinensis
ENSDNOG00000004315	SMARCA1	98	90.936	ENSANAG00000023098	SMARCA1	96	90.936	Aotus_nancymaae
ENSDNOG00000004315	SMARCA1	94	81.939	ENSACLG00000025356	smarca5	93	84.194	Astatotilapia_calliptera
ENSDNOG00000004315	SMARCA1	86	88.629	ENSAMXG00000011227	smarca1	99	89.455	Astyanax_mexicanus
ENSDNOG00000004315	SMARCA1	96	81.344	ENSAMXG00000005709	smarca5	92	84.963	Astyanax_mexicanus
ENSDNOG00000004315	SMARCA1	99	94.798	ENSBTAG00000002292	SMARCA1	100	94.101	Bos_taurus
ENSDNOG00000004315	SMARCA1	92	63.674	WBGene00002169	isw-1	95	63.120	Caenorhabditis_elegans
ENSDNOG00000004315	SMARCA1	98	96.059	ENSCJAG00000002868	SMARCA1	96	96.059	Callithrix_jacchus
ENSDNOG00000004315	SMARCA1	99	86.122	ENSCAFG00000018673	SMARCA1	98	86.122	Canis_familiaris
ENSDNOG00000004315	SMARCA1	99	96.329	ENSCAFG00020001751	SMARCA1	98	96.329	Canis_lupus_dingo
ENSDNOG00000004315	SMARCA1	99	94.798	ENSCHIG00000009837	SMARCA1	98	95.279	Capra_hircus
ENSDNOG00000004315	SMARCA1	94	96.520	ENSTSYG00000004240	SMARCA1	98	95.829	Carlito_syrichta
ENSDNOG00000004315	SMARCA1	100	92.748	ENSCPOG00000013601	SMARCA1	95	94.689	Cavia_porcellus
ENSDNOG00000004315	SMARCA1	98	93.005	ENSCCAG00000030817	SMARCA1	96	93.005	Cebus_capucinus
ENSDNOG00000004315	SMARCA1	100	96.139	ENSCATG00000015921	SMARCA1	99	96.139	Cercocebus_atys
ENSDNOG00000004315	SMARCA1	98	94.778	ENSCLAG00000002171	SMARCA1	98	93.580	Chinchilla_lanigera
ENSDNOG00000004315	SMARCA1	99	96.232	ENSCSAG00000008460	SMARCA1	98	96.232	Chlorocebus_sabaeus
ENSDNOG00000004315	SMARCA1	94	92.016	ENSCPBG00000001146	SMARCA1	92	92.016	Chrysemys_picta_bellii
ENSDNOG00000004315	SMARCA1	92	74.402	ENSCING00000004110	swi/snf	95	74.402	Ciona_intestinalis
ENSDNOG00000004315	SMARCA1	92	74.190	ENSCSAVG00000004620	-	99	74.609	Ciona_savignyi
ENSDNOG00000004315	SMARCA1	99	96.135	ENSCANG00000007183	SMARCA1	98	96.135	Colobus_angolensis_palliatus
ENSDNOG00000004315	SMARCA1	99	93.147	ENSCGRG00001010776	Smarca1	98	93.003	Cricetulus_griseus_chok1gshd
ENSDNOG00000004315	SMARCA1	95	93.933	ENSCGRG00000015301	Smarca1	99	93.933	Cricetulus_griseus_crigri
ENSDNOG00000004315	SMARCA1	90	84.418	ENSCSEG00000000328	smarca5	93	83.540	Cynoglossus_semilaevis
ENSDNOG00000004315	SMARCA1	91	83.987	ENSCVAG00000008668	smarca5	97	84.485	Cyprinodon_variegatus
ENSDNOG00000004315	SMARCA1	96	80.661	ENSDARG00000052348	smarca5	93	83.420	Danio_rerio
ENSDNOG00000004315	SMARCA1	94	85.513	ENSDARG00000012776	smarca1	96	85.185	Danio_rerio
ENSDNOG00000004315	SMARCA1	100	94.208	ENSDORG00000009270	Smarca1	98	94.390	Dipodomys_ordii
ENSDNOG00000004315	SMARCA1	94	73.081	FBgn0011604	Iswi	94	74.150	Drosophila_melanogaster
ENSDNOG00000004315	SMARCA1	79	92.727	ENSETEG00000017426	SMARCA1	85	92.727	Echinops_telfairi
ENSDNOG00000004315	SMARCA1	90	82.403	ENSEBUG00000001239	smarca5	94	81.952	Eptatretus_burgeri
ENSDNOG00000004315	SMARCA1	94	92.316	ENSEASG00005008218	SMARCA1	98	92.792	Equus_asinus_asinus
ENSDNOG00000004315	SMARCA1	99	95.954	ENSECAG00000012106	SMARCA1	98	95.954	Equus_caballus
ENSDNOG00000004315	SMARCA1	77	96.358	ENSEEUG00000014927	SMARCA1	82	96.358	Erinaceus_europaeus
ENSDNOG00000004315	SMARCA1	92	87.292	ENSELUG00000010515	smarca1	96	87.001	Esox_lucius
ENSDNOG00000004315	SMARCA1	99	96.329	ENSFCAG00000018496	SMARCA1	98	96.329	Felis_catus
ENSDNOG00000004315	SMARCA1	88	92.990	ENSFALG00000000209	SMARCA1	98	92.990	Ficedula_albicollis
ENSDNOG00000004315	SMARCA1	95	94.960	ENSFDAG00000009818	SMARCA1	97	94.960	Fukomys_damarensis
ENSDNOG00000004315	SMARCA1	97	79.881	ENSFHEG00000007687	smarca5	91	85.029	Fundulus_heteroclitus
ENSDNOG00000004315	SMARCA1	95	90.625	ENSGALG00000008431	SMARCA1	99	89.713	Gallus_gallus
ENSDNOG00000004315	SMARCA1	91	84.411	ENSGAFG00000017731	smarca5	93	83.644	Gambusia_affinis
ENSDNOG00000004315	SMARCA1	92	92.827	ENSGAGG00000023575	SMARCA1	98	92.827	Gopherus_agassizii
ENSDNOG00000004315	SMARCA1	71	100.000	ENSGGOG00000012841	-	95	100.000	Gorilla_gorilla
ENSDNOG00000004315	SMARCA1	99	94.879	ENSHGLG00000003080	SMARCA1	98	94.879	Heterocephalus_glaber_female
ENSDNOG00000004315	SMARCA1	94	95.092	ENSHGLG00100001102	SMARCA1	98	95.092	Heterocephalus_glaber_male
ENSDNOG00000004315	SMARCA1	91	84.452	ENSHCOG00000005458	smarca5	95	82.653	Hippocampus_comes
ENSDNOG00000004315	SMARCA1	95	81.568	ENSIPUG00000005229	SMARCA5	97	82.197	Ictalurus_punctatus
ENSDNOG00000004315	SMARCA1	95	85.455	ENSIPUG00000016905	Smarca1	98	87.188	Ictalurus_punctatus
ENSDNOG00000004315	SMARCA1	99	95.942	ENSSTOG00000014524	SMARCA1	98	95.942	Ictidomys_tridecemlineatus
ENSDNOG00000004315	SMARCA1	100	94.305	ENSJJAG00000002593	Smarca1	99	94.305	Jaculus_jaculus
ENSDNOG00000004315	SMARCA1	91	84.665	ENSKMAG00000003777	smarca5	95	82.790	Kryptolebias_marmoratus
ENSDNOG00000004315	SMARCA1	90	83.351	ENSLBEG00000013295	SMARCA1	100	84.450	Labrus_bergylta
ENSDNOG00000004315	SMARCA1	92	83.281	ENSLBEG00000018112	smarca5	93	83.230	Labrus_bergylta
ENSDNOG00000004315	SMARCA1	94	89.969	ENSLACG00000016697	SMARCA1	96	89.969	Latimeria_chalumnae
ENSDNOG00000004315	SMARCA1	93	89.386	ENSLOCG00000014591	smarca1	95	89.242	Lepisosteus_oculatus
ENSDNOG00000004315	SMARCA1	94	95.727	ENSLAFG00000000896	SMARCA1	99	95.228	Loxodonta_africana
ENSDNOG00000004315	SMARCA1	100	96.139	ENSMFAG00000002117	SMARCA1	99	96.139	Macaca_fascicularis
ENSDNOG00000004315	SMARCA1	100	96.139	ENSMMUG00000008818	SMARCA1	99	96.757	Macaca_mulatta
ENSDNOG00000004315	SMARCA1	100	96.139	ENSMNEG00000041768	SMARCA1	99	96.139	Macaca_nemestrina
ENSDNOG00000004315	SMARCA1	99	96.232	ENSMLEG00000043198	SMARCA1	98	96.232	Mandrillus_leucophaeus
ENSDNOG00000004315	SMARCA1	91	84.624	ENSMAMG00000014294	smarca5	93	83.954	Mastacembelus_armatus
ENSDNOG00000004315	SMARCA1	94	81.939	ENSMZEG00005009369	smarca5	93	84.194	Maylandia_zebra
ENSDNOG00000004315	SMARCA1	93	91.282	ENSMGAG00000007042	SMARCA1	98	91.010	Meleagris_gallopavo
ENSDNOG00000004315	SMARCA1	100	93.852	ENSMAUG00000008133	Smarca1	99	93.852	Mesocricetus_auratus
ENSDNOG00000004315	SMARCA1	99	95.942	ENSMICG00000015768	SMARCA1	98	95.942	Microcebus_murinus
ENSDNOG00000004315	SMARCA1	100	92.939	ENSMOCG00000009464	Smarca1	99	92.939	Microtus_ochrogaster
ENSDNOG00000004315	SMARCA1	92	82.019	ENSMMOG00000005547	smarca5	97	81.988	Mola_mola
ENSDNOG00000004315	SMARCA1	97	89.505	ENSMODG00000013187	-	97	89.219	Monodelphis_domestica
ENSDNOG00000004315	SMARCA1	91	84.239	ENSMALG00000002081	smarca5	98	81.809	Monopterus_albus
ENSDNOG00000004315	SMARCA1	100	93.660	MGP_CAROLIEiJ_G0033034	Smarca1	99	93.660	Mus_caroli
ENSDNOG00000004315	SMARCA1	100	93.660	ENSMUSG00000031099	Smarca1	99	93.660	Mus_musculus
ENSDNOG00000004315	SMARCA1	100	93.660	MGP_PahariEiJ_G0031579	Smarca1	99	93.660	Mus_pahari
ENSDNOG00000004315	SMARCA1	100	93.756	MGP_SPRETEiJ_G0034192	Smarca1	99	93.756	Mus_spretus
ENSDNOG00000004315	SMARCA1	99	94.938	ENSMPUG00000017423	SMARCA1	92	94.938	Mustela_putorius_furo
ENSDNOG00000004315	SMARCA1	98	92.913	ENSMLUG00000029614	SMARCA1	96	92.906	Myotis_lucifugus
ENSDNOG00000004315	SMARCA1	100	94.044	ENSNGAG00000006492	Smarca1	99	94.044	Nannospalax_galili
ENSDNOG00000004315	SMARCA1	91	84.836	ENSNBRG00000004463	smarca5	97	84.298	Neolamprologus_brichardi
ENSDNOG00000004315	SMARCA1	98	94.255	ENSNLEG00000015179	SMARCA1	98	95.821	Nomascus_leucogenys
ENSDNOG00000004315	SMARCA1	91	81.303	ENSMEUG00000008819	SMARCA1	100	81.303	Notamacropus_eugenii
ENSDNOG00000004315	SMARCA1	98	93.191	ENSODEG00000012163	SMARCA1	98	93.191	Octodon_degus
ENSDNOG00000004315	SMARCA1	94	82.041	ENSONIG00000009993	smarca5	93	84.298	Oreochromis_niloticus
ENSDNOG00000004315	SMARCA1	92	93.361	ENSOANG00000002862	SMARCA1	98	93.361	Ornithorhynchus_anatinus
ENSDNOG00000004315	SMARCA1	99	94.203	ENSOCUG00000001047	SMARCA1	98	94.396	Oryctolagus_cuniculus
ENSDNOG00000004315	SMARCA1	91	84.452	ENSORLG00000021998	smarca5	94	82.653	Oryzias_latipes
ENSDNOG00000004315	SMARCA1	91	84.558	ENSORLG00020017679	smarca5	94	82.755	Oryzias_latipes_hni
ENSDNOG00000004315	SMARCA1	91	84.452	ENSORLG00015017210	smarca5	94	82.551	Oryzias_latipes_hsok
ENSDNOG00000004315	SMARCA1	91	84.452	ENSOMEG00000000086	smarca5	94	82.551	Oryzias_melastigma
ENSDNOG00000004315	SMARCA1	100	94.752	ENSOGAG00000004399	SMARCA1	99	94.752	Otolemur_garnettii
ENSDNOG00000004315	SMARCA1	94	95.556	ENSOARG00000014638	SMARCA1	98	97.179	Ovis_aries
ENSDNOG00000004315	SMARCA1	99	96.232	ENSPPAG00000034647	SMARCA1	98	96.232	Pan_paniscus
ENSDNOG00000004315	SMARCA1	99	96.425	ENSPPRG00000008929	SMARCA1	98	96.425	Panthera_pardus
ENSDNOG00000004315	SMARCA1	94	95.070	ENSPTIG00000000915	SMARCA1	96	95.070	Panthera_tigris_altaica
ENSDNOG00000004315	SMARCA1	100	96.139	ENSPTRG00000049876	SMARCA1	99	96.139	Pan_troglodytes
ENSDNOG00000004315	SMARCA1	99	96.232	ENSPANG00000003871	SMARCA1	98	96.232	Papio_anubis
ENSDNOG00000004315	SMARCA1	91	86.814	ENSPKIG00000013411	smarca1	98	86.364	Paramormyrops_kingsleyae
ENSDNOG00000004315	SMARCA1	94	90.799	ENSPSIG00000010101	SMARCA1	98	92.616	Pelodiscus_sinensis
ENSDNOG00000004315	SMARCA1	100	94.236	ENSPEMG00000017503	Smarca1	99	94.236	Peromyscus_maniculatus_bairdii
ENSDNOG00000004315	SMARCA1	98	89.515	ENSPCIG00000015460	SMARCA1	97	91.522	Phascolarctos_cinereus
ENSDNOG00000004315	SMARCA1	91	84.665	ENSPFOG00000007649	smarca5	93	83.644	Poecilia_formosa
ENSDNOG00000004315	SMARCA1	91	84.665	ENSPLAG00000003363	smarca5	93	83.644	Poecilia_latipinna
ENSDNOG00000004315	SMARCA1	91	84.558	ENSPMEG00000019849	smarca5	93	83.540	Poecilia_mexicana
ENSDNOG00000004315	SMARCA1	91	84.558	ENSPREG00000023250	smarca5	93	83.540	Poecilia_reticulata
ENSDNOG00000004315	SMARCA1	98	93.399	ENSPPYG00000020703	SMARCA1	96	93.399	Pongo_abelii
ENSDNOG00000004315	SMARCA1	78	86.842	ENSPCOG00000020722	SMARCA1	94	92.444	Propithecus_coquereli
ENSDNOG00000004315	SMARCA1	92	94.730	ENSPVAG00000003805	SMARCA1	92	94.730	Pteropus_vampyrus
ENSDNOG00000004315	SMARCA1	57	84.658	ENSPNYG00000012299	smarca5	91	83.467	Pundamilia_nyererei
ENSDNOG00000004315	SMARCA1	99	94.493	ENSRNOG00000003762	Smarca1	98	94.493	Rattus_norvegicus
ENSDNOG00000004315	SMARCA1	99	96.135	ENSRROG00000034167	SMARCA1	98	96.135	Rhinopithecus_roxellana
ENSDNOG00000004315	SMARCA1	94	95.753	ENSSBOG00000020641	SMARCA1	98	97.388	Saimiri_boliviensis_boliviensis
ENSDNOG00000004315	SMARCA1	90	86.681	ENSSHAG00000013518	SMARCA1	97	86.211	Sarcophilus_harrisii
ENSDNOG00000004315	SMARCA1	92	83.753	ENSSFOG00015016794	smarca5	98	84.688	Scleropages_formosus
ENSDNOG00000004315	SMARCA1	95	86.842	ENSSFOG00015009043	smarca1	98	86.640	Scleropages_formosus
ENSDNOG00000004315	SMARCA1	91	83.333	ENSSMAG00000004801	smarca5	93	83.281	Scophthalmus_maximus
ENSDNOG00000004315	SMARCA1	91	84.093	ENSSDUG00000020690	smarca5	95	82.822	Seriola_dumerili
ENSDNOG00000004315	SMARCA1	91	84.093	ENSSLDG00000025190	smarca5	95	82.822	Seriola_lalandi_dorsalis
ENSDNOG00000004315	SMARCA1	87	87.363	ENSSARG00000000842	SMARCA1	92	87.363	Sorex_araneus
ENSDNOG00000004315	SMARCA1	94	91.420	ENSSPUG00000000590	SMARCA1	97	89.772	Sphenodon_punctatus
ENSDNOG00000004315	SMARCA1	91	84.305	ENSSPAG00000002894	smarca5	94	84.831	Stegastes_partitus
ENSDNOG00000004315	SMARCA1	100	95.958	ENSSSCG00000012649	SMARCA1	100	95.958	Sus_scrofa
ENSDNOG00000004315	SMARCA1	91	93.312	ENSTGUG00000003899	-	97	92.999	Taeniopygia_guttata
ENSDNOG00000004315	SMARCA1	91	84.199	ENSTRUG00000014094	smarca5	95	82.383	Takifugu_rubripes
ENSDNOG00000004315	SMARCA1	90	83.351	ENSTNIG00000017717	smarca5	92	82.402	Tetraodon_nigroviridis
ENSDNOG00000004315	SMARCA1	94	88.283	ENSTBEG00000014973	SMARCA1	99	88.283	Tupaia_belangeri
ENSDNOG00000004315	SMARCA1	94	92.581	ENSTTRG00000006168	SMARCA1	99	92.480	Tursiops_truncatus
ENSDNOG00000004315	SMARCA1	99	95.942	ENSUAMG00000020201	SMARCA1	98	95.942	Ursus_americanus
ENSDNOG00000004315	SMARCA1	94	92.245	ENSUMAG00000004073	SMARCA1	97	97.567	Ursus_maritimus
ENSDNOG00000004315	SMARCA1	74	97.585	ENSVPAG00000010492	-	79	97.585	Vicugna_pacos
ENSDNOG00000004315	SMARCA1	94	97.134	ENSVVUG00000008878	SMARCA1	100	97.495	Vulpes_vulpes
ENSDNOG00000004315	SMARCA1	92	90.084	ENSXETG00000001526	smarca1	98	89.918	Xenopus_tropicalis
ENSDNOG00000004315	SMARCA1	91	84.305	ENSXCOG00000011170	smarca5	96	83.540	Xiphophorus_couchianus
ENSDNOG00000004315	SMARCA1	91	84.305	ENSXMAG00000009678	smarca5	98	84.262	Xiphophorus_maculatus