EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000004776 (Gene tree)
Gene ID: 101413469
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 162508 bases
Position: chrJH571701.1:543646-706153
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000003687	ResIII	PF04851.15	7.8e-11	1	1
ENSDNOP00000003687	DEAD	PF00270.29	1.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000004776	HFM1-201	4452	-	ENSDNOP00000003687	1483 (aa)	-	UPI0003CC24F0

Gene Model

Click here to download ENSDNOG00000004776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000004776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000004776	HFM1	55	31.526	ENSDNOG00000011227	SNRNP200	73	31.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000004776	HFM1	100	81.402	ENSG00000162669	HFM1	100	86.957	Homo_sapiens
ENSDNOG00000004776	HFM1	60	64.713	ENSAPOG00000005304	hfm1	100	64.713	Acanthochromis_polyacanthus
ENSDNOG00000004776	HFM1	100	80.930	ENSAMEG00000000432	HFM1	100	80.930	Ailuropoda_melanoleuca
ENSDNOG00000004776	HFM1	72	57.618	ENSACIG00000021553	hfm1	93	57.618	Amphilophus_citrinellus
ENSDNOG00000004776	HFM1	61	64.061	ENSAOCG00000022839	hfm1	97	68.664	Amphiprion_ocellaris
ENSDNOG00000004776	HFM1	61	63.827	ENSAPEG00000014316	hfm1	97	68.836	Amphiprion_percula
ENSDNOG00000004776	HFM1	81	52.590	ENSATEG00000019181	hfm1	91	58.142	Anabas_testudineus
ENSDNOG00000004776	HFM1	100	57.465	ENSAPLG00000013639	HFM1	100	57.465	Anas_platyrhynchos
ENSDNOG00000004776	HFM1	100	77.995	ENSANAG00000029513	HFM1	100	77.995	Aotus_nancymaae
ENSDNOG00000004776	HFM1	62	62.971	ENSACLG00000009033	hfm1	98	63.412	Astatotilapia_calliptera
ENSDNOG00000004776	HFM1	83	54.213	ENSAMXG00000006108	hfm1	92	51.227	Astyanax_mexicanus
ENSDNOG00000004776	HFM1	100	79.852	ENSBTAG00000020856	HFM1	100	79.852	Bos_taurus
ENSDNOG00000004776	HFM1	100	79.852	ENSCJAG00000001843	HFM1	100	79.852	Callithrix_jacchus
ENSDNOG00000004776	HFM1	99	82.148	ENSCAFG00000020187	HFM1	99	82.148	Canis_familiaris
ENSDNOG00000004776	HFM1	100	79.071	ENSTSYG00000014250	HFM1	100	79.071	Carlito_syrichta
ENSDNOG00000004776	HFM1	99	74.039	ENSCPOG00000007421	HFM1	99	74.039	Cavia_porcellus
ENSDNOG00000004776	HFM1	100	79.919	ENSCCAG00000033206	HFM1	100	79.919	Cebus_capucinus
ENSDNOG00000004776	HFM1	100	80.863	ENSCATG00000030987	HFM1	100	80.863	Cercocebus_atys
ENSDNOG00000004776	HFM1	100	79.043	ENSCLAG00000005173	HFM1	99	79.043	Chinchilla_lanigera
ENSDNOG00000004776	HFM1	64	96.053	ENSCHOG00000011824	-	74	96.053	Choloepus_hoffmanni
ENSDNOG00000004776	HFM1	100	69.571	ENSCGRG00001016995	Hfm1	100	69.571	Cricetulus_griseus_chok1gshd
ENSDNOG00000004776	HFM1	100	72.391	ENSCGRG00000017181	Hfm1	100	72.391	Cricetulus_griseus_crigri
ENSDNOG00000004776	HFM1	62	62.818	ENSCSEG00000017659	hfm1	91	60.790	Cynoglossus_semilaevis
ENSDNOG00000004776	HFM1	56	64.994	ENSDARG00000104288	hfm1	76	64.994	Danio_rerio
ENSDNOG00000004776	HFM1	100	72.370	ENSDORG00000014661	Hfm1	100	72.370	Dipodomys_ordii
ENSDNOG00000004776	HFM1	71	83.871	ENSEASG00005015424	HFM1	97	83.871	Equus_asinus_asinus
ENSDNOG00000004776	HFM1	100	84.781	ENSECAG00000024039	HFM1	100	84.781	Equus_caballus
ENSDNOG00000004776	HFM1	60	66.186	ENSELUG00000018944	hfm1	97	66.186	Esox_lucius
ENSDNOG00000004776	HFM1	100	80.728	ENSFCAG00000029116	HFM1	100	80.728	Felis_catus
ENSDNOG00000004776	HFM1	100	57.437	ENSFALG00000001781	HFM1	100	57.877	Ficedula_albicollis
ENSDNOG00000004776	HFM1	100	78.270	ENSFDAG00000020816	HFM1	100	78.270	Fukomys_damarensis
ENSDNOG00000004776	HFM1	64	60.000	ENSGMOG00000017436	hfm1	99	60.000	Gadus_morhua
ENSDNOG00000004776	HFM1	62	64.725	ENSGAFG00000018093	hfm1	94	65.394	Gambusia_affinis
ENSDNOG00000004776	HFM1	64	60.838	ENSGACG00000015686	hfm1	99	60.838	Gasterosteus_aculeatus
ENSDNOG00000004776	HFM1	100	81.065	ENSGGOG00000038524	HFM1	100	81.065	Gorilla_gorilla
ENSDNOG00000004776	HFM1	62	64.263	ENSHBUG00000007309	hfm1	96	57.972	Haplochromis_burtoni
ENSDNOG00000004776	HFM1	54	63.379	ENSHCOG00000019632	hfm1	96	63.379	Hippocampus_comes
ENSDNOG00000004776	HFM1	62	64.492	ENSIPUG00000017020	hfm1	97	62.373	Ictalurus_punctatus
ENSDNOG00000004776	HFM1	99	77.193	ENSJJAG00000017198	Hfm1	100	77.193	Jaculus_jaculus
ENSDNOG00000004776	HFM1	60	62.542	ENSKMAG00000002282	hfm1	99	57.831	Kryptolebias_marmoratus
ENSDNOG00000004776	HFM1	62	62.971	ENSLBEG00000006759	hfm1	96	64.601	Labrus_bergylta
ENSDNOG00000004776	HFM1	63	69.279	ENSLACG00000010698	HFM1	99	64.345	Latimeria_chalumnae
ENSDNOG00000004776	HFM1	73	60.529	ENSLOCG00000004931	hfm1	97	60.747	Lepisosteus_oculatus
ENSDNOG00000004776	HFM1	50	89.098	ENSLAFG00000015903	-	99	89.098	Loxodonta_africana
ENSDNOG00000004776	HFM1	100	78.240	ENSMFAG00000003649	HFM1	100	78.240	Macaca_fascicularis
ENSDNOG00000004776	HFM1	100	80.593	ENSMMUG00000006819	HFM1	100	80.593	Macaca_mulatta
ENSDNOG00000004776	HFM1	52	69.806	ENSMAMG00000004623	hfm1	97	65.777	Mastacembelus_armatus
ENSDNOG00000004776	HFM1	62	62.971	ENSMZEG00005004679	hfm1	98	63.412	Maylandia_zebra
ENSDNOG00000004776	HFM1	53	77.041	ENSMGAG00000008437	HFM1	98	77.041	Meleagris_gallopavo
ENSDNOG00000004776	HFM1	100	72.776	ENSMAUG00000018858	Hfm1	100	72.776	Mesocricetus_auratus
ENSDNOG00000004776	HFM1	100	80.673	ENSMICG00000037935	HFM1	100	80.673	Microcebus_murinus
ENSDNOG00000004776	HFM1	100	70.620	ENSMOCG00000014812	Hfm1	100	70.620	Microtus_ochrogaster
ENSDNOG00000004776	HFM1	60	63.811	ENSMMOG00000006148	hfm1	96	63.457	Mola_mola
ENSDNOG00000004776	HFM1	62	63.023	ENSMALG00000002401	hfm1	93	65.614	Monopterus_albus
ENSDNOG00000004776	HFM1	95	72.343	MGP_CAROLIEiJ_G0027496	Hfm1	100	72.343	Mus_caroli
ENSDNOG00000004776	HFM1	100	71.496	ENSMUSG00000043410	Hfm1	100	71.496	Mus_musculus
ENSDNOG00000004776	HFM1	100	72.102	MGP_PahariEiJ_G0017268	Hfm1	100	72.102	Mus_pahari
ENSDNOG00000004776	HFM1	100	71.024	MGP_SPRETEiJ_G0028495	Hfm1	100	71.024	Mus_spretus
ENSDNOG00000004776	HFM1	100	81.886	ENSMPUG00000004594	HFM1	100	81.886	Mustela_putorius_furo
ENSDNOG00000004776	HFM1	100	79.111	ENSMLUG00000010200	HFM1	100	79.111	Myotis_lucifugus
ENSDNOG00000004776	HFM1	70	55.100	ENSNBRG00000002910	hfm1	97	64.677	Neolamprologus_brichardi
ENSDNOG00000004776	HFM1	100	77.435	ENSNLEG00000010285	HFM1	100	77.435	Nomascus_leucogenys
ENSDNOG00000004776	HFM1	84	61.298	ENSMEUG00000015788	HFM1	84	61.298	Notamacropus_eugenii
ENSDNOG00000004776	HFM1	84	75.595	ENSOPRG00000013916	HFM1	84	75.595	Ochotona_princeps
ENSDNOG00000004776	HFM1	67	62.038	ENSONIG00000010590	hfm1	100	58.668	Oreochromis_niloticus
ENSDNOG00000004776	HFM1	54	64.648	ENSORLG00000026844	hfm1	99	64.648	Oryzias_latipes
ENSDNOG00000004776	HFM1	82	48.312	ENSORLG00020002951	hfm1	96	48.312	Oryzias_latipes_hni
ENSDNOG00000004776	HFM1	90	50.661	ENSOMEG00000016474	hfm1	100	47.355	Oryzias_melastigma
ENSDNOG00000004776	HFM1	83	84.146	ENSOGAG00000032369	HFM1	100	84.146	Otolemur_garnettii
ENSDNOG00000004776	HFM1	100	79.731	ENSOARG00000015812	HFM1	100	79.731	Ovis_aries
ENSDNOG00000004776	HFM1	92	82.216	ENSPPAG00000024582	HFM1	100	82.216	Pan_paniscus
ENSDNOG00000004776	HFM1	100	80.863	ENSPPRG00000003270	HFM1	100	80.863	Panthera_pardus
ENSDNOG00000004776	HFM1	100	80.660	ENSPTIG00000018881	HFM1	100	80.660	Panthera_tigris_altaica
ENSDNOG00000004776	HFM1	100	81.334	ENSPTRG00000000948	HFM1	100	81.334	Pan_troglodytes
ENSDNOG00000004776	HFM1	100	80.863	ENSPANG00000009838	HFM1	100	80.863	Papio_anubis
ENSDNOG00000004776	HFM1	60	66.328	ENSPKIG00000003810	hfm1	95	66.787	Paramormyrops_kingsleyae
ENSDNOG00000004776	HFM1	55	65.249	ENSPMGG00000011059	hfm1	99	65.249	Periophthalmus_magnuspinnatus
ENSDNOG00000004776	HFM1	100	74.057	ENSPEMG00000022852	Hfm1	100	74.057	Peromyscus_maniculatus_bairdii
ENSDNOG00000004776	HFM1	100	66.332	ENSPCIG00000014233	HFM1	100	66.332	Phascolarctos_cinereus
ENSDNOG00000004776	HFM1	71	60.808	ENSPFOG00000017194	hfm1	99	60.808	Poecilia_formosa
ENSDNOG00000004776	HFM1	63	65.778	ENSPLAG00000000571	hfm1	85	65.778	Poecilia_latipinna
ENSDNOG00000004776	HFM1	63	65.672	ENSPMEG00000019475	hfm1	86	65.672	Poecilia_mexicana
ENSDNOG00000004776	HFM1	62	65.405	ENSPREG00000007803	hfm1	94	64.994	Poecilia_reticulata
ENSDNOG00000004776	HFM1	100	80.795	ENSPPYG00000001163	HFM1	100	80.795	Pongo_abelii
ENSDNOG00000004776	HFM1	68	77.966	ENSPCAG00000004289	-	70	77.966	Procavia_capensis
ENSDNOG00000004776	HFM1	100	72.574	ENSPVAG00000009713	HFM1	100	72.574	Pteropus_vampyrus
ENSDNOG00000004776	HFM1	62	62.863	ENSPNYG00000001795	hfm1	98	63.412	Pundamilia_nyererei
ENSDNOG00000004776	HFM1	58	65.283	ENSPNAG00000010865	hfm1	86	65.283	Pygocentrus_nattereri
ENSDNOG00000004776	HFM1	100	71.361	ENSRNOG00000023299	Hfm1	100	71.361	Rattus_norvegicus
ENSDNOG00000004776	HFM1	100	80.728	ENSRROG00000045569	HFM1	100	80.728	Rhinopithecus_roxellana
ENSDNOG00000004776	HFM1	100	75.135	ENSSBOG00000027456	HFM1	100	75.135	Saimiri_boliviensis_boliviensis
ENSDNOG00000004776	HFM1	58	70.208	ENSSHAG00000014616	-	98	70.208	Sarcophilus_harrisii
ENSDNOG00000004776	HFM1	100	49.679	ENSSFOG00015020129	hfm1	100	49.679	Scleropages_formosus
ENSDNOG00000004776	HFM1	60	64.422	ENSSMAG00000006907	hfm1	86	64.422	Scophthalmus_maximus
ENSDNOG00000004776	HFM1	55	65.450	ENSSDUG00000011424	hfm1	92	65.450	Seriola_dumerili
ENSDNOG00000004776	HFM1	55	65.614	ENSSLDG00000016386	hfm1	91	65.614	Seriola_lalandi_dorsalis
ENSDNOG00000004776	HFM1	61	61.111	ENSSPAG00000001023	hfm1	100	65.468	Stegastes_partitus
ENSDNOG00000004776	HFM1	100	80.943	ENSSSCG00000006912	HFM1	100	80.943	Sus_scrofa
ENSDNOG00000004776	HFM1	64	74.502	ENSTGUG00000006172	HFM1	99	74.502	Taeniopygia_guttata
ENSDNOG00000004776	HFM1	100	75.758	ENSTTRG00000013933	HFM1	100	75.758	Tursiops_truncatus
ENSDNOG00000004776	HFM1	93	79.394	ENSVPAG00000011331	HFM1	93	79.394	Vicugna_pacos
ENSDNOG00000004776	HFM1	71	81.552	ENSVVUG00000020760	HFM1	99	81.552	Vulpes_vulpes
ENSDNOG00000004776	HFM1	55	66.910	ENSXMAG00000004178	hfm1	91	66.910	Xiphophorus_maculatus