EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000006224 (Gene tree)
Gene ID: 101442942
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 40303 bases
Position: chrJH578779.1:1743518-1783820
Accession: 101442942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000004825	MMR_HSR1	PF01926.23	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000006227	LSG1-201	2917	-	ENSDNOP00000004825	657 (aa)	XP_004479692	UPI000328D04D

Gene Model

Click here to download ENSDNOG00000006224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000006224's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000006224	LSG1	100	84.441	ENSG00000041802	LSG1	98	91.379	Homo_sapiens
ENSDNOG00000006224	LSG1	99	63.733	ENSAPOG00000009694	lsg1	99	63.885	Acanthochromis_polyacanthus
ENSDNOG00000006224	LSG1	99	81.269	ENSAMEG00000009343	LSG1	99	81.571	Ailuropoda_melanoleuca
ENSDNOG00000006224	LSG1	98	63.400	ENSACIG00000012406	lsg1	99	63.623	Amphilophus_citrinellus
ENSDNOG00000006224	LSG1	99	63.278	ENSAOCG00000016066	lsg1	99	63.733	Amphiprion_ocellaris
ENSDNOG00000006224	LSG1	99	63.581	ENSAPEG00000003252	lsg1	99	63.733	Amphiprion_percula
ENSDNOG00000006224	LSG1	98	64.806	ENSATEG00000011794	lsg1	99	64.590	Anabas_testudineus
ENSDNOG00000006224	LSG1	95	64.490	ENSACAG00000004222	LSG1	99	64.444	Anolis_carolinensis
ENSDNOG00000006224	LSG1	100	83.988	ENSANAG00000021153	LSG1	100	84.290	Aotus_nancymaae
ENSDNOG00000006224	LSG1	99	62.593	ENSACLG00000000520	lsg1	99	63.040	Astatotilapia_calliptera
ENSDNOG00000006224	LSG1	99	62.353	ENSAMXG00000008271	lsg1	99	62.575	Astyanax_mexicanus
ENSDNOG00000006224	LSG1	100	83.409	ENSBTAG00000008461	LSG1	100	83.714	Bos_taurus
ENSDNOG00000006224	LSG1	68	48.357	WBGene00016907	C53H9.2	90	45.494	Caenorhabditis_elegans
ENSDNOG00000006224	LSG1	100	83.384	ENSCJAG00000013962	LSG1	100	83.686	Callithrix_jacchus
ENSDNOG00000006224	LSG1	95	81.369	ENSCAFG00000013445	LSG1	99	81.688	Canis_familiaris
ENSDNOG00000006224	LSG1	99	80.271	ENSCAFG00020002216	LSG1	99	81.789	Canis_lupus_dingo
ENSDNOG00000006224	LSG1	99	82.012	ENSCHIG00000015769	LSG1	99	82.317	Capra_hircus
ENSDNOG00000006224	LSG1	100	84.441	ENSTSYG00000001447	LSG1	100	84.743	Carlito_syrichta
ENSDNOG00000006224	LSG1	95	75.962	ENSCAPG00000009856	LSG1	100	76.282	Cavia_aperea
ENSDNOG00000006224	LSG1	100	82.779	ENSCCAG00000035744	LSG1	100	83.082	Cebus_capucinus
ENSDNOG00000006224	LSG1	100	84.743	ENSCATG00000042060	LSG1	100	83.384	Cercocebus_atys
ENSDNOG00000006224	LSG1	100	85.196	ENSCSAG00000008796	LSG1	92	85.498	Chlorocebus_sabaeus
ENSDNOG00000006224	LSG1	99	66.568	ENSCPBG00000015941	LSG1	83	68.722	Chrysemys_picta_bellii
ENSDNOG00000006224	LSG1	67	62.827	ENSCING00000007079	-	93	62.827	Ciona_intestinalis
ENSDNOG00000006224	LSG1	68	63.265	ENSCSAVG00000002514	-	89	63.265	Ciona_savignyi
ENSDNOG00000006224	LSG1	100	84.894	ENSCANG00000030709	LSG1	100	85.196	Colobus_angolensis_palliatus
ENSDNOG00000006224	LSG1	100	80.851	ENSCGRG00001019846	Lsg1	100	81.307	Cricetulus_griseus_chok1gshd
ENSDNOG00000006224	LSG1	100	80.851	ENSCGRG00000014617	Lsg1	100	81.307	Cricetulus_griseus_crigri
ENSDNOG00000006224	LSG1	98	62.963	ENSCSEG00000008522	lsg1	99	62.481	Cynoglossus_semilaevis
ENSDNOG00000006224	LSG1	97	65.469	ENSCVAG00000002484	lsg1	99	65.549	Cyprinodon_variegatus
ENSDNOG00000006224	LSG1	99	64.643	ENSDARG00000015352	lsg1	99	65.449	Danio_rerio
ENSDNOG00000006224	LSG1	84	59.091	FBgn0266284	Ns3	99	47.130	Drosophila_melanogaster
ENSDNOG00000006224	LSG1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSDNOG00000006224	LSG1	88	57.458	ENSEBUG00000003119	lsg1	85	57.458	Eptatretus_burgeri
ENSDNOG00000006224	LSG1	100	85.801	ENSEASG00005000678	LSG1	100	86.103	Equus_asinus_asinus
ENSDNOG00000006224	LSG1	100	85.801	ENSECAG00000017659	LSG1	100	86.103	Equus_caballus
ENSDNOG00000006224	LSG1	87	81.034	ENSEEUG00000015217	LSG1	87	81.034	Erinaceus_europaeus
ENSDNOG00000006224	LSG1	99	61.212	ENSELUG00000023973	lsg1	99	61.145	Esox_lucius
ENSDNOG00000006224	LSG1	99	83.359	ENSFCAG00000024957	LSG1	99	83.661	Felis_catus
ENSDNOG00000006224	LSG1	92	66.016	ENSFALG00000007210	LSG1	94	65.964	Ficedula_albicollis
ENSDNOG00000006224	LSG1	100	76.712	ENSFDAG00000017373	LSG1	100	77.017	Fukomys_damarensis
ENSDNOG00000006224	LSG1	97	63.174	ENSFHEG00000003680	lsg1	99	64.091	Fundulus_heteroclitus
ENSDNOG00000006224	LSG1	81	70.333	ENSGMOG00000015834	lsg1	87	70.333	Gadus_morhua
ENSDNOG00000006224	LSG1	99	62.874	ENSGALG00000007058	LSG1	87	63.568	Gallus_gallus
ENSDNOG00000006224	LSG1	97	64.330	ENSGAFG00000015831	lsg1	99	64.742	Gambusia_affinis
ENSDNOG00000006224	LSG1	98	61.832	ENSGACG00000009323	lsg1	99	62.142	Gasterosteus_aculeatus
ENSDNOG00000006224	LSG1	100	85.045	ENSGGOG00000000520	LSG1	100	85.347	Gorilla_gorilla
ENSDNOG00000006224	LSG1	99	63.348	ENSHBUG00000005659	lsg1	99	63.801	Haplochromis_burtoni
ENSDNOG00000006224	LSG1	100	74.320	ENSHGLG00000017390	LSG1	100	75.716	Heterocephalus_glaber_female
ENSDNOG00000006224	LSG1	100	74.169	ENSHGLG00100018587	LSG1	100	75.566	Heterocephalus_glaber_male
ENSDNOG00000006224	LSG1	97	63.142	ENSHCOG00000016848	lsg1	99	63.126	Hippocampus_comes
ENSDNOG00000006224	LSG1	99	64.536	ENSIPUG00000008631	lsg1	99	64.536	Ictalurus_punctatus
ENSDNOG00000006224	LSG1	81	78.788	ENSSTOG00000010234	LSG1	99	78.788	Ictidomys_tridecemlineatus
ENSDNOG00000006224	LSG1	100	77.879	ENSJJAG00000015513	Lsg1	100	78.182	Jaculus_jaculus
ENSDNOG00000006224	LSG1	98	62.733	ENSKMAG00000009681	lsg1	99	62.709	Kryptolebias_marmoratus
ENSDNOG00000006224	LSG1	98	61.742	ENSLBEG00000024261	lsg1	99	62.652	Labrus_bergylta
ENSDNOG00000006224	LSG1	99	65.476	ENSLACG00000013399	LSG1	99	65.436	Latimeria_chalumnae
ENSDNOG00000006224	LSG1	98	65.284	ENSLOCG00000004918	lsg1	99	65.714	Lepisosteus_oculatus
ENSDNOG00000006224	LSG1	100	83.409	ENSLAFG00000012919	-	100	83.714	Loxodonta_africana
ENSDNOG00000006224	LSG1	100	84.743	ENSMFAG00000039903	LSG1	100	83.384	Macaca_fascicularis
ENSDNOG00000006224	LSG1	100	84.894	ENSMMUG00000010708	LSG1	100	85.196	Macaca_mulatta
ENSDNOG00000006224	LSG1	100	84.743	ENSMNEG00000031538	LSG1	100	83.082	Macaca_nemestrina
ENSDNOG00000006224	LSG1	100	84.592	ENSMLEG00000041184	LSG1	100	84.894	Mandrillus_leucophaeus
ENSDNOG00000006224	LSG1	99	62.991	ENSMAMG00000000470	lsg1	99	62.840	Mastacembelus_armatus
ENSDNOG00000006224	LSG1	99	63.499	ENSMZEG00005017865	lsg1	99	63.952	Maylandia_zebra
ENSDNOG00000006224	LSG1	89	64.310	ENSMGAG00000007050	LSG1	99	65.254	Meleagris_gallopavo
ENSDNOG00000006224	LSG1	95	77.033	ENSMAUG00000016976	Lsg1	96	77.990	Mesocricetus_auratus
ENSDNOG00000006224	LSG1	100	83.612	ENSMICG00000049087	LSG1	100	83.915	Microcebus_murinus
ENSDNOG00000006224	LSG1	100	78.788	ENSMOCG00000022136	Lsg1	100	79.394	Microtus_ochrogaster
ENSDNOG00000006224	LSG1	84	71.845	ENSMMOG00000008884	lsg1	98	70.370	Mola_mola
ENSDNOG00000006224	LSG1	99	58.699	ENSMODG00000019828	LSG1	99	58.974	Monodelphis_domestica
ENSDNOG00000006224	LSG1	100	79.148	MGP_CAROLIEiJ_G0020648	Lsg1	100	79.604	Mus_caroli
ENSDNOG00000006224	LSG1	100	78.995	ENSMUSG00000022538	Lsg1	100	79.452	Mus_musculus
ENSDNOG00000006224	LSG1	98	79.444	MGP_PahariEiJ_G0016352	Lsg1	100	79.787	Mus_pahari
ENSDNOG00000006224	LSG1	100	79.148	MGP_SPRETEiJ_G0021544	Lsg1	100	79.604	Mus_spretus
ENSDNOG00000006224	LSG1	99	82.148	ENSMPUG00000003734	LSG1	99	82.451	Mustela_putorius_furo
ENSDNOG00000006224	LSG1	99	85.388	ENSMLUG00000012548	LSG1	99	85.693	Myotis_lucifugus
ENSDNOG00000006224	LSG1	100	79.148	ENSNGAG00000021872	Lsg1	100	79.452	Nannospalax_galili
ENSDNOG00000006224	LSG1	100	85.196	ENSNLEG00000008293	LSG1	100	85.498	Nomascus_leucogenys
ENSDNOG00000006224	LSG1	69	67.318	ENSMEUG00000009041	-	84	67.318	Notamacropus_eugenii
ENSDNOG00000006224	LSG1	99	63.363	ENSONIG00000002635	lsg1	99	63.554	Oreochromis_niloticus
ENSDNOG00000006224	LSG1	95	71.520	ENSOANG00000012742	LSG1	99	71.520	Ornithorhynchus_anatinus
ENSDNOG00000006224	LSG1	100	81.089	ENSOCUG00000004817	LSG1	100	82.175	Oryctolagus_cuniculus
ENSDNOG00000006224	LSG1	98	63.932	ENSORLG00000007695	lsg1	99	63.182	Oryzias_latipes
ENSDNOG00000006224	LSG1	98	63.256	ENSORLG00020016286	lsg1	99	62.462	Oryzias_latipes_hni
ENSDNOG00000006224	LSG1	98	62.791	ENSORLG00015012025	lsg1	99	62.918	Oryzias_latipes_hsok
ENSDNOG00000006224	LSG1	98	62.693	ENSOMEG00000022379	lsg1	99	62.367	Oryzias_melastigma
ENSDNOG00000006224	LSG1	100	82.583	ENSOGAG00000003475	LSG1	100	82.883	Otolemur_garnettii
ENSDNOG00000006224	LSG1	99	82.040	ENSOARG00000020403	LSG1	99	82.344	Ovis_aries
ENSDNOG00000006224	LSG1	100	84.894	ENSPPAG00000029271	LSG1	100	84.894	Pan_paniscus
ENSDNOG00000006224	LSG1	99	82.335	ENSPPRG00000010281	LSG1	99	82.635	Panthera_pardus
ENSDNOG00000006224	LSG1	99	83.207	ENSPTIG00000010789	LSG1	99	83.510	Panthera_tigris_altaica
ENSDNOG00000006224	LSG1	100	84.743	ENSPTRG00000015760	LSG1	100	84.743	Pan_troglodytes
ENSDNOG00000006224	LSG1	100	84.743	ENSPANG00000018249	LSG1	100	83.384	Papio_anubis
ENSDNOG00000006224	LSG1	98	63.608	ENSPKIG00000002895	lsg1	100	64.492	Paramormyrops_kingsleyae
ENSDNOG00000006224	LSG1	96	64.241	ENSPSIG00000009821	LSG1	99	64.241	Pelodiscus_sinensis
ENSDNOG00000006224	LSG1	95	63.955	ENSPMGG00000000931	lsg1	99	63.796	Periophthalmus_magnuspinnatus
ENSDNOG00000006224	LSG1	100	81.155	ENSPEMG00000012082	-	100	81.155	Peromyscus_maniculatus_bairdii
ENSDNOG00000006224	LSG1	99	59.104	ENSPMAG00000007451	lsg1	99	58.990	Petromyzon_marinus
ENSDNOG00000006224	LSG1	99	67.188	ENSPCIG00000013890	LSG1	82	67.188	Phascolarctos_cinereus
ENSDNOG00000006224	LSG1	97	64.596	ENSPFOG00000021882	lsg1	99	65.152	Poecilia_formosa
ENSDNOG00000006224	LSG1	97	64.286	ENSPLAG00000019536	lsg1	99	64.242	Poecilia_latipinna
ENSDNOG00000006224	LSG1	97	63.820	ENSPMEG00000017281	lsg1	99	64.394	Poecilia_mexicana
ENSDNOG00000006224	LSG1	97	54.421	ENSPREG00000006048	lsg1	99	54.519	Poecilia_reticulata
ENSDNOG00000006224	LSG1	92	83.633	ENSPPYG00000014425	LSG1	100	83.633	Pongo_abelii
ENSDNOG00000006224	LSG1	90	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSDNOG00000006224	LSG1	100	84.592	ENSPCOG00000012360	LSG1	100	84.894	Propithecus_coquereli
ENSDNOG00000006224	LSG1	99	62.444	ENSPNYG00000021994	lsg1	99	62.891	Pundamilia_nyererei
ENSDNOG00000006224	LSG1	99	64.060	ENSPNAG00000015533	lsg1	99	64.060	Pygocentrus_nattereri
ENSDNOG00000006224	LSG1	100	79.728	ENSRNOG00000001727	Lsg1	100	80.030	Rattus_norvegicus
ENSDNOG00000006224	LSG1	100	84.290	ENSRBIG00000029053	LSG1	100	84.592	Rhinopithecus_bieti
ENSDNOG00000006224	LSG1	100	84.290	ENSRROG00000037702	LSG1	100	84.592	Rhinopithecus_roxellana
ENSDNOG00000006224	LSG1	62	59.281	YGL099W	LSG1	67	59.281	Saccharomyces_cerevisiae
ENSDNOG00000006224	LSG1	100	83.988	ENSSBOG00000034938	LSG1	100	84.290	Saimiri_boliviensis_boliviensis
ENSDNOG00000006224	LSG1	78	64.981	ENSSHAG00000003487	LSG1	99	65.725	Sarcophilus_harrisii
ENSDNOG00000006224	LSG1	98	64.031	ENSSFOG00015008955	lsg1	99	63.733	Scleropages_formosus
ENSDNOG00000006224	LSG1	98	63.441	ENSSDUG00000004622	lsg1	99	63.348	Seriola_dumerili
ENSDNOG00000006224	LSG1	98	62.712	ENSSLDG00000010869	lsg1	99	63.110	Seriola_lalandi_dorsalis
ENSDNOG00000006224	LSG1	81	81.818	ENSSARG00000012981	LSG1	83	81.337	Sorex_araneus
ENSDNOG00000006224	LSG1	99	67.064	ENSSPUG00000016347	LSG1	99	67.064	Sphenodon_punctatus
ENSDNOG00000006224	LSG1	99	62.671	ENSSPAG00000005508	lsg1	99	62.367	Stegastes_partitus
ENSDNOG00000006224	LSG1	99	81.915	ENSSSCG00000011827	LSG1	99	82.219	Sus_scrofa
ENSDNOG00000006224	LSG1	89	63.149	ENSTGUG00000009068	LSG1	99	63.682	Taeniopygia_guttata
ENSDNOG00000006224	LSG1	97	60.998	ENSTRUG00000017380	lsg1	99	60.030	Takifugu_rubripes
ENSDNOG00000006224	LSG1	97	65.163	ENSTNIG00000015570	lsg1	99	65.303	Tetraodon_nigroviridis
ENSDNOG00000006224	LSG1	99	76.256	ENSTTRG00000000559	LSG1	99	76.256	Tursiops_truncatus
ENSDNOG00000006224	LSG1	99	82.300	ENSUAMG00000012454	LSG1	99	82.602	Ursus_americanus
ENSDNOG00000006224	LSG1	99	82.300	ENSUMAG00000000855	LSG1	99	82.602	Ursus_maritimus
ENSDNOG00000006224	LSG1	95	78.185	ENSVPAG00000012400	LSG1	99	78.185	Vicugna_pacos
ENSDNOG00000006224	LSG1	99	77.727	ENSVVUG00000008956	LSG1	97	80.892	Vulpes_vulpes
ENSDNOG00000006224	LSG1	99	65.211	ENSXETG00000003451	lsg1	99	65.745	Xenopus_tropicalis
ENSDNOG00000006224	LSG1	97	64.297	ENSXCOG00000003239	lsg1	99	63.650	Xiphophorus_couchianus
ENSDNOG00000006224	LSG1	97	62.935	ENSXMAG00000005536	lsg1	99	64.435	Xiphophorus_maculatus