EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000006344 (Gene tree)
Gene ID: 101438302
Gene Symbol: CPSF4
Alias: CPSF30|NAR
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 12570 bases
Position: chrJH568787.1:168448-181017
Accession: 101438302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000004912	zf-CCCH	PF00642.24	3e-20	1	2
ENSDNOP00000004912	zf-CCCH	PF00642.24	3e-20	2	2
ENSDNOP00000004912	zf-CCHC	PF00098.23	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000006342	CPSF4-201	1127	-	ENSDNOP00000004912	269 (aa)	XP_004462726	UPI000328B204

Gene Model

Click here to download ENSDNOG00000006344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000006344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000006344	CPSF4	63	65.882	ENSDNOG00000014458	CPSF4L	89	65.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000006344	CPSF4	100	99.628	ENSG00000160917	CPSF4	100	100.000	Homo_sapiens
ENSDNOG00000006344	CPSF4	67	74.725	ENSAPOG00000004921	cpsf4	100	74.725	Acanthochromis_polyacanthus
ENSDNOG00000006344	CPSF4	100	99.628	ENSAMEG00000006252	CPSF4	100	99.628	Ailuropoda_melanoleuca
ENSDNOG00000006344	CPSF4	100	79.554	ENSACIG00000009248	cpsf4	100	77.695	Amphilophus_citrinellus
ENSDNOG00000006344	CPSF4	100	85.185	ENSAOCG00000019616	cpsf4	100	85.185	Amphiprion_ocellaris
ENSDNOG00000006344	CPSF4	100	85.185	ENSAPEG00000011679	cpsf4	100	85.185	Amphiprion_percula
ENSDNOG00000006344	CPSF4	100	84.559	ENSATEG00000007010	cpsf4	100	84.559	Anabas_testudineus
ENSDNOG00000006344	CPSF4	100	93.680	ENSACAG00000012941	CPSF4	89	93.680	Anolis_carolinensis
ENSDNOG00000006344	CPSF4	100	99.628	ENSANAG00000021360	CPSF4	100	99.628	Aotus_nancymaae
ENSDNOG00000006344	CPSF4	100	83.704	ENSACLG00000010374	cpsf4	100	83.704	Astatotilapia_calliptera
ENSDNOG00000006344	CPSF4	100	85.240	ENSAMXG00000031647	cpsf4	100	85.978	Astyanax_mexicanus
ENSDNOG00000006344	CPSF4	100	89.963	ENSBTAG00000002090	CPSF4	100	89.963	Bos_taurus
ENSDNOG00000006344	CPSF4	100	99.628	ENSCJAG00000015826	CPSF4	100	99.628	Callithrix_jacchus
ENSDNOG00000006344	CPSF4	100	99.257	ENSCAFG00000015036	CPSF4	100	99.257	Canis_familiaris
ENSDNOG00000006344	CPSF4	100	92.937	ENSCAFG00020014462	CPSF4	100	92.937	Canis_lupus_dingo
ENSDNOG00000006344	CPSF4	100	99.628	ENSCHIG00000014313	CPSF4	100	99.628	Capra_hircus
ENSDNOG00000006344	CPSF4	89	82.988	ENSTSYG00000008195	-	99	79.600	Carlito_syrichta
ENSDNOG00000006344	CPSF4	100	90.335	ENSTSYG00000005712	-	100	90.335	Carlito_syrichta
ENSDNOG00000006344	CPSF4	100	82.222	ENSTSYG00000014604	-	100	79.259	Carlito_syrichta
ENSDNOG00000006344	CPSF4	81	99.541	ENSCAPG00000013881	CPSF4	87	99.541	Cavia_aperea
ENSDNOG00000006344	CPSF4	100	90.335	ENSCPOG00000001783	CPSF4	100	90.335	Cavia_porcellus
ENSDNOG00000006344	CPSF4	100	99.628	ENSCCAG00000028291	CPSF4	100	99.628	Cebus_capucinus
ENSDNOG00000006344	CPSF4	100	99.628	ENSCATG00000038440	CPSF4	100	99.628	Cercocebus_atys
ENSDNOG00000006344	CPSF4	100	99.257	ENSCLAG00000007050	CPSF4	100	99.257	Chinchilla_lanigera
ENSDNOG00000006344	CPSF4	100	99.628	ENSCSAG00000017795	CPSF4	100	99.628	Chlorocebus_sabaeus
ENSDNOG00000006344	CPSF4	80	95.833	ENSCPBG00000020869	CPSF4	100	95.833	Chrysemys_picta_bellii
ENSDNOG00000006344	CPSF4	61	81.212	ENSCPBG00000010269	-	100	80.723	Chrysemys_picta_bellii
ENSDNOG00000006344	CPSF4	97	55.939	ENSCING00000021080	-	97	55.939	Ciona_intestinalis
ENSDNOG00000006344	CPSF4	96	53.357	ENSCSAVG00000011469	-	97	53.546	Ciona_savignyi
ENSDNOG00000006344	CPSF4	100	99.628	ENSCANG00000019384	CPSF4	100	99.628	Colobus_angolensis_palliatus
ENSDNOG00000006344	CPSF4	100	90.335	ENSCGRG00001024184	Cpsf4	100	90.335	Cricetulus_griseus_chok1gshd
ENSDNOG00000006344	CPSF4	100	99.628	ENSCGRG00000013892	Cpsf4	100	99.628	Cricetulus_griseus_crigri
ENSDNOG00000006344	CPSF4	100	84.074	ENSCSEG00000019055	cpsf4	100	84.074	Cynoglossus_semilaevis
ENSDNOG00000006344	CPSF4	100	83.333	ENSCVAG00000016528	cpsf4	100	83.333	Cyprinodon_variegatus
ENSDNOG00000006344	CPSF4	100	85.240	ENSDARG00000020217	cpsf4	100	85.240	Danio_rerio
ENSDNOG00000006344	CPSF4	81	99.078	ENSDORG00000000742	Cpsf4	100	99.078	Dipodomys_ordii
ENSDNOG00000006344	CPSF4	100	54.422	FBgn0015621	Clp	99	54.110	Drosophila_melanogaster
ENSDNOG00000006344	CPSF4	70	100.000	ENSETEG00000002608	CPSF4	70	100.000	Echinops_telfairi
ENSDNOG00000006344	CPSF4	99	65.169	ENSEBUG00000012552	cpsf4	98	65.169	Eptatretus_burgeri
ENSDNOG00000006344	CPSF4	100	90.335	ENSEASG00005002487	CPSF4	100	90.335	Equus_asinus_asinus
ENSDNOG00000006344	CPSF4	100	99.628	ENSECAG00000007525	CPSF4	100	99.628	Equus_caballus
ENSDNOG00000006344	CPSF4	63	100.000	ENSEEUG00000002158	CPSF4	73	100.000	Erinaceus_europaeus
ENSDNOG00000006344	CPSF4	100	82.847	ENSELUG00000011481	cpsf4	100	80.657	Esox_lucius
ENSDNOG00000006344	CPSF4	100	99.628	ENSFCAG00000015070	CPSF4	100	99.628	Felis_catus
ENSDNOG00000006344	CPSF4	61	56.977	ENSFALG00000012906	-	100	56.977	Ficedula_albicollis
ENSDNOG00000006344	CPSF4	100	86.245	ENSFALG00000013799	CPSF4	100	86.245	Ficedula_albicollis
ENSDNOG00000006344	CPSF4	90	98.765	ENSFDAG00000014092	CPSF4	100	98.765	Fukomys_damarensis
ENSDNOG00000006344	CPSF4	100	83.333	ENSFHEG00000010880	cpsf4	100	83.333	Fundulus_heteroclitus
ENSDNOG00000006344	CPSF4	100	77.491	ENSGMOG00000002330	cpsf4	100	76.015	Gadus_morhua
ENSDNOG00000006344	CPSF4	100	86.245	ENSGALG00000004714	CPSF4	100	85.130	Gallus_gallus
ENSDNOG00000006344	CPSF4	99	38.421	ENSGALG00000004441	-	92	36.842	Gallus_gallus
ENSDNOG00000006344	CPSF4	100	82.593	ENSGAFG00000010580	cpsf4	100	82.593	Gambusia_affinis
ENSDNOG00000006344	CPSF4	100	77.491	ENSGACG00000007792	cpsf4	100	76.384	Gasterosteus_aculeatus
ENSDNOG00000006344	CPSF4	68	76.923	ENSGAGG00000020579	-	92	81.212	Gopherus_agassizii
ENSDNOG00000006344	CPSF4	100	95.911	ENSGAGG00000021835	CPSF4	100	95.911	Gopherus_agassizii
ENSDNOG00000006344	CPSF4	100	99.628	ENSGGOG00000015131	CPSF4	100	99.628	Gorilla_gorilla
ENSDNOG00000006344	CPSF4	100	83.704	ENSHBUG00000013699	cpsf4	100	83.704	Haplochromis_burtoni
ENSDNOG00000006344	CPSF4	100	97.786	ENSHGLG00000017150	CPSF4	100	97.786	Heterocephalus_glaber_female
ENSDNOG00000006344	CPSF4	78	66.507	ENSHGLG00100017302	-	100	53.903	Heterocephalus_glaber_male
ENSDNOG00000006344	CPSF4	87	95.763	ENSHGLG00100009215	-	100	95.763	Heterocephalus_glaber_male
ENSDNOG00000006344	CPSF4	100	81.111	ENSHCOG00000004397	cpsf4	100	78.519	Hippocampus_comes
ENSDNOG00000006344	CPSF4	100	84.133	ENSIPUG00000017147	cpsf4	100	85.294	Ictalurus_punctatus
ENSDNOG00000006344	CPSF4	100	99.628	ENSSTOG00000001688	CPSF4	100	99.628	Ictidomys_tridecemlineatus
ENSDNOG00000006344	CPSF4	100	99.257	ENSJJAG00000019426	Cpsf4	100	99.257	Jaculus_jaculus
ENSDNOG00000006344	CPSF4	100	82.222	ENSKMAG00000015642	cpsf4	100	82.222	Kryptolebias_marmoratus
ENSDNOG00000006344	CPSF4	100	89.259	ENSLACG00000010938	CPSF4	100	89.259	Latimeria_chalumnae
ENSDNOG00000006344	CPSF4	100	60.741	ENSLACG00000018470	-	100	60.741	Latimeria_chalumnae
ENSDNOG00000006344	CPSF4	100	89.219	ENSLOCG00000004814	cpsf4	100	89.219	Lepisosteus_oculatus
ENSDNOG00000006344	CPSF4	100	99.257	ENSLAFG00000000159	CPSF4	100	99.257	Loxodonta_africana
ENSDNOG00000006344	CPSF4	100	99.628	ENSMFAG00000001462	CPSF4	100	99.628	Macaca_fascicularis
ENSDNOG00000006344	CPSF4	100	99.628	ENSMMUG00000019191	CPSF4	100	99.628	Macaca_mulatta
ENSDNOG00000006344	CPSF4	100	99.628	ENSMNEG00000032306	CPSF4	100	99.628	Macaca_nemestrina
ENSDNOG00000006344	CPSF4	100	99.628	ENSMLEG00000034721	CPSF4	100	99.628	Mandrillus_leucophaeus
ENSDNOG00000006344	CPSF4	100	84.074	ENSMAMG00000006244	cpsf4	100	83.516	Mastacembelus_armatus
ENSDNOG00000006344	CPSF4	100	83.704	ENSMZEG00005007515	cpsf4	100	83.704	Maylandia_zebra
ENSDNOG00000006344	CPSF4	87	84.681	ENSMGAG00000004235	CPSF4	100	83.404	Meleagris_gallopavo
ENSDNOG00000006344	CPSF4	100	99.628	ENSMAUG00000021253	Cpsf4	100	99.628	Mesocricetus_auratus
ENSDNOG00000006344	CPSF4	100	99.257	ENSMICG00000017429	CPSF4	100	99.257	Microcebus_murinus
ENSDNOG00000006344	CPSF4	100	99.628	ENSMOCG00000014901	Cpsf4	100	99.628	Microtus_ochrogaster
ENSDNOG00000006344	CPSF4	100	83.704	ENSMMOG00000001813	cpsf4	100	83.704	Mola_mola
ENSDNOG00000006344	CPSF4	100	97.398	ENSMODG00000001367	CPSF4	100	97.398	Monodelphis_domestica
ENSDNOG00000006344	CPSF4	100	82.963	ENSMALG00000012611	cpsf4	100	82.963	Monopterus_albus
ENSDNOG00000006344	CPSF4	100	99.628	MGP_CAROLIEiJ_G0028012	Cpsf4	100	99.628	Mus_caroli
ENSDNOG00000006344	CPSF4	100	99.628	ENSMUSG00000029625	Cpsf4	100	99.628	Mus_musculus
ENSDNOG00000006344	CPSF4	100	99.628	MGP_PahariEiJ_G0024581	Cpsf4	100	99.628	Mus_pahari
ENSDNOG00000006344	CPSF4	100	99.257	MGP_SPRETEiJ_G0029013	Cpsf4	100	99.257	Mus_spretus
ENSDNOG00000006344	CPSF4	100	99.628	ENSMPUG00000016508	CPSF4	100	99.628	Mustela_putorius_furo
ENSDNOG00000006344	CPSF4	87	87.660	ENSMLUG00000010980	CPSF4	100	87.660	Myotis_lucifugus
ENSDNOG00000006344	CPSF4	100	99.257	ENSNGAG00000001567	Cpsf4	100	99.257	Nannospalax_galili
ENSDNOG00000006344	CPSF4	91	83.333	ENSNBRG00000003943	cpsf4	98	83.333	Neolamprologus_brichardi
ENSDNOG00000006344	CPSF4	100	96.654	ENSNLEG00000011074	CPSF4	100	96.654	Nomascus_leucogenys
ENSDNOG00000006344	CPSF4	100	97.398	ENSMEUG00000006955	CPSF4	100	97.398	Notamacropus_eugenii
ENSDNOG00000006344	CPSF4	100	98.885	ENSOPRG00000013663	CPSF4	100	98.885	Ochotona_princeps
ENSDNOG00000006344	CPSF4	100	99.628	ENSODEG00000011181	-	100	99.628	Octodon_degus
ENSDNOG00000006344	CPSF4	100	74.725	ENSODEG00000009779	-	100	74.725	Octodon_degus
ENSDNOG00000006344	CPSF4	99	76.226	ENSODEG00000018283	-	91	73.962	Octodon_degus
ENSDNOG00000006344	CPSF4	100	83.704	ENSONIG00000008495	cpsf4	100	83.704	Oreochromis_niloticus
ENSDNOG00000006344	CPSF4	87	95.745	ENSOANG00000007729	CPSF4	100	95.745	Ornithorhynchus_anatinus
ENSDNOG00000006344	CPSF4	100	54.317	ENSOANG00000009568	-	100	52.518	Ornithorhynchus_anatinus
ENSDNOG00000006344	CPSF4	100	98.885	ENSOCUG00000002437	CPSF4	70	98.885	Oryctolagus_cuniculus
ENSDNOG00000006344	CPSF4	100	83.271	ENSORLG00000022798	cpsf4	100	83.271	Oryzias_latipes
ENSDNOG00000006344	CPSF4	100	83.271	ENSORLG00020008548	cpsf4	100	83.271	Oryzias_latipes_hni
ENSDNOG00000006344	CPSF4	100	82.900	ENSORLG00015019575	cpsf4	100	82.900	Oryzias_latipes_hsok
ENSDNOG00000006344	CPSF4	100	81.784	ENSOMEG00000005176	cpsf4	100	81.784	Oryzias_melastigma
ENSDNOG00000006344	CPSF4	100	99.257	ENSOGAG00000010884	CPSF4	100	99.257	Otolemur_garnettii
ENSDNOG00000006344	CPSF4	100	88.278	ENSOARG00000018668	CPSF4	100	87.912	Ovis_aries
ENSDNOG00000006344	CPSF4	100	99.257	ENSPPAG00000043355	CPSF4	100	99.257	Pan_paniscus
ENSDNOG00000006344	CPSF4	100	99.628	ENSPPRG00000003134	CPSF4	100	99.628	Panthera_pardus
ENSDNOG00000006344	CPSF4	90	99.174	ENSPTIG00000005604	CPSF4	90	99.174	Panthera_tigris_altaica
ENSDNOG00000006344	CPSF4	100	99.257	ENSPTRG00000019453	CPSF4	100	99.257	Pan_troglodytes
ENSDNOG00000006344	CPSF4	100	99.628	ENSPANG00000023123	CPSF4	100	99.628	Papio_anubis
ENSDNOG00000006344	CPSF4	100	84.307	ENSPKIG00000014278	cpsf4	100	84.307	Paramormyrops_kingsleyae
ENSDNOG00000006344	CPSF4	80	95.370	ENSPSIG00000011229	CPSF4	100	95.370	Pelodiscus_sinensis
ENSDNOG00000006344	CPSF4	81	58.904	ENSPSIG00000018198	-	100	57.798	Pelodiscus_sinensis
ENSDNOG00000006344	CPSF4	100	72.862	ENSPMGG00000017735	cpsf4	100	71.747	Periophthalmus_magnuspinnatus
ENSDNOG00000006344	CPSF4	100	99.628	ENSPEMG00000004508	Cpsf4	100	99.628	Peromyscus_maniculatus_bairdii
ENSDNOG00000006344	CPSF4	100	97.398	ENSPCIG00000024776	CPSF4	100	97.398	Phascolarctos_cinereus
ENSDNOG00000006344	CPSF4	100	82.593	ENSPFOG00000014912	cpsf4	100	82.593	Poecilia_formosa
ENSDNOG00000006344	CPSF4	100	75.093	ENSPLAG00000009599	cpsf4	100	75.093	Poecilia_latipinna
ENSDNOG00000006344	CPSF4	100	82.593	ENSPMEG00000009790	cpsf4	100	82.593	Poecilia_mexicana
ENSDNOG00000006344	CPSF4	100	81.852	ENSPREG00000018166	cpsf4	100	78.889	Poecilia_reticulata
ENSDNOG00000006344	CPSF4	87	98.718	ENSPPYG00000017378	CPSF4	100	98.718	Pongo_abelii
ENSDNOG00000006344	CPSF4	100	98.513	ENSPCAG00000001892	CPSF4	100	98.513	Procavia_capensis
ENSDNOG00000006344	CPSF4	100	99.628	ENSPCOG00000012771	CPSF4	100	99.628	Propithecus_coquereli
ENSDNOG00000006344	CPSF4	100	92.937	ENSPVAG00000007531	CPSF4	100	92.937	Pteropus_vampyrus
ENSDNOG00000006344	CPSF4	100	83.704	ENSPNYG00000018559	cpsf4	100	83.704	Pundamilia_nyererei
ENSDNOG00000006344	CPSF4	100	86.347	ENSPNAG00000003736	cpsf4	100	87.085	Pygocentrus_nattereri
ENSDNOG00000006344	CPSF4	100	89.963	ENSRNOG00000000985	Cpsf4	100	89.963	Rattus_norvegicus
ENSDNOG00000006344	CPSF4	87	99.573	ENSRBIG00000033886	CPSF4	100	99.573	Rhinopithecus_bieti
ENSDNOG00000006344	CPSF4	100	90.335	ENSRROG00000040431	CPSF4	100	90.335	Rhinopithecus_roxellana
ENSDNOG00000006344	CPSF4	100	99.628	ENSSBOG00000020493	CPSF4	100	99.628	Saimiri_boliviensis_boliviensis
ENSDNOG00000006344	CPSF4	100	97.398	ENSSHAG00000011533	CPSF4	100	97.398	Sarcophilus_harrisii
ENSDNOG00000006344	CPSF4	100	85.507	ENSSFOG00015007883	cpsf4	100	86.232	Scleropages_formosus
ENSDNOG00000006344	CPSF4	100	79.554	ENSSMAG00000006374	cpsf4	100	77.695	Scophthalmus_maximus
ENSDNOG00000006344	CPSF4	100	83.704	ENSSDUG00000018887	cpsf4	100	83.704	Seriola_dumerili
ENSDNOG00000006344	CPSF4	100	84.444	ENSSLDG00000019078	cpsf4	100	84.444	Seriola_lalandi_dorsalis
ENSDNOG00000006344	CPSF4	87	99.145	ENSSARG00000012416	CPSF4	100	99.145	Sorex_araneus
ENSDNOG00000006344	CPSF4	100	94.424	ENSSPUG00000003549	CPSF4	100	94.424	Sphenodon_punctatus
ENSDNOG00000006344	CPSF4	96	58.915	ENSSPUG00000014803	-	97	59.690	Sphenodon_punctatus
ENSDNOG00000006344	CPSF4	100	79.926	ENSSPAG00000006174	cpsf4	100	76.952	Stegastes_partitus
ENSDNOG00000006344	CPSF4	100	89.963	ENSSSCG00000026896	CPSF4	100	89.963	Sus_scrofa
ENSDNOG00000006344	CPSF4	100	85.240	ENSTGUG00000007552	CPSF4	100	83.764	Taeniopygia_guttata
ENSDNOG00000006344	CPSF4	100	81.111	ENSTRUG00000024220	cpsf4	100	81.111	Takifugu_rubripes
ENSDNOG00000006344	CPSF4	100	80.000	ENSTNIG00000006265	cpsf4	100	81.481	Tetraodon_nigroviridis
ENSDNOG00000006344	CPSF4	87	89.744	ENSTBEG00000011406	CPSF4	100	89.744	Tupaia_belangeri
ENSDNOG00000006344	CPSF4	100	78.439	ENSTTRG00000003007	CPSF4	100	78.439	Tursiops_truncatus
ENSDNOG00000006344	CPSF4	92	89.069	ENSUAMG00000008051	CPSF4	85	89.069	Ursus_americanus
ENSDNOG00000006344	CPSF4	100	89.963	ENSUMAG00000009474	CPSF4	100	89.963	Ursus_maritimus
ENSDNOG00000006344	CPSF4	100	89.963	ENSVVUG00000008824	CPSF4	100	89.963	Vulpes_vulpes
ENSDNOG00000006344	CPSF4	100	88.172	ENSXETG00000009892	cpsf4	100	88.172	Xenopus_tropicalis
ENSDNOG00000006344	CPSF4	99	60.821	ENSXETG00000004641	cpsf4l	99	60.821	Xenopus_tropicalis
ENSDNOG00000006344	CPSF4	100	82.222	ENSXCOG00000016040	cpsf4	100	82.222	Xiphophorus_couchianus
ENSDNOG00000006344	CPSF4	100	82.593	ENSXMAG00000024670	cpsf4	100	82.593	Xiphophorus_maculatus