EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000006795 (Gene tree)
Gene ID: 101424869
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 453102 bases
Position: chrJH570472.1:119440-572541
Accession: 30646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000005285	TUDOR	PF00567.24	2.4e-26	1	1
ENSDNOP00000005285	SNase	PF00565.17	5.8e-66	1	5
ENSDNOP00000005285	SNase	PF00565.17	5.8e-66	2	5
ENSDNOP00000005285	SNase	PF00565.17	5.8e-66	3	5
ENSDNOP00000005285	SNase	PF00565.17	5.8e-66	4	5
ENSDNOP00000005285	SNase	PF00565.17	5.8e-66	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000006806	SND1-201	2979	-	ENSDNOP00000005285	887 (aa)	-	UPI0003CC01DA

Gene Model

Click here to download ENSDNOG00000006795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000006795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000006795	SND1	100	96.054	ENSG00000197157	SND1	97	96.054	Homo_sapiens
ENSDNOG00000006795	SND1	100	83.015	ENSAPOG00000017599	snd1	97	83.015	Acanthochromis_polyacanthus
ENSDNOG00000006795	SND1	100	96.167	ENSAMEG00000004664	SND1	92	96.167	Ailuropoda_melanoleuca
ENSDNOG00000006795	SND1	100	79.842	ENSACIG00000003551	snd1	97	79.842	Amphilophus_citrinellus
ENSDNOG00000006795	SND1	100	82.790	ENSAOCG00000014166	snd1	97	82.790	Amphiprion_ocellaris
ENSDNOG00000006795	SND1	100	82.790	ENSAPEG00000007067	snd1	97	82.790	Amphiprion_percula
ENSDNOG00000006795	SND1	98	81.995	ENSATEG00000018475	snd1	87	81.995	Anabas_testudineus
ENSDNOG00000006795	SND1	100	96.167	ENSANAG00000034463	SND1	99	96.163	Aotus_nancymaae
ENSDNOG00000006795	SND1	100	82.340	ENSACLG00000022897	snd1	97	82.340	Astatotilapia_calliptera
ENSDNOG00000006795	SND1	100	82.716	ENSAMXG00000016318	snd1	97	82.716	Astyanax_mexicanus
ENSDNOG00000006795	SND1	100	95.716	ENSBTAG00000010692	SND1	97	95.716	Bos_taurus
ENSDNOG00000006795	SND1	99	46.282	WBGene00006626	tsn-1	97	46.726	Caenorhabditis_elegans
ENSDNOG00000006795	SND1	100	95.941	ENSCJAG00000017668	SND1	99	95.937	Callithrix_jacchus
ENSDNOG00000006795	SND1	100	96.280	ENSCAFG00000001700	SND1	97	96.280	Canis_familiaris
ENSDNOG00000006795	SND1	100	96.280	ENSCAFG00020021639	SND1	97	96.280	Canis_lupus_dingo
ENSDNOG00000006795	SND1	100	96.054	ENSCHIG00000023390	SND1	98	96.050	Capra_hircus
ENSDNOG00000006795	SND1	75	94.737	ENSTSYG00000004979	SND1	96	94.737	Carlito_syrichta
ENSDNOG00000006795	SND1	99	82.545	ENSCAPG00000010677	SND1	97	82.545	Cavia_aperea
ENSDNOG00000006795	SND1	100	94.927	ENSCPOG00000006251	SND1	97	94.927	Cavia_porcellus
ENSDNOG00000006795	SND1	100	96.280	ENSCCAG00000036847	SND1	98	96.275	Cebus_capucinus
ENSDNOG00000006795	SND1	100	96.167	ENSCATG00000035214	SND1	99	96.163	Cercocebus_atys
ENSDNOG00000006795	SND1	100	95.265	ENSCLAG00000011796	SND1	97	95.265	Chinchilla_lanigera
ENSDNOG00000006795	SND1	100	96.167	ENSCSAG00000010182	SND1	97	96.167	Chlorocebus_sabaeus
ENSDNOG00000006795	SND1	80	91.176	ENSCHOG00000002218	SND1	86	91.176	Choloepus_hoffmanni
ENSDNOG00000006795	SND1	100	90.530	ENSCPBG00000018094	SND1	97	90.530	Chrysemys_picta_bellii
ENSDNOG00000006795	SND1	100	55.444	ENSCING00000000524	-	97	55.444	Ciona_intestinalis
ENSDNOG00000006795	SND1	100	56.439	ENSCSAVG00000008807	-	97	56.439	Ciona_savignyi
ENSDNOG00000006795	SND1	100	96.167	ENSCANG00000035119	SND1	97	96.167	Colobus_angolensis_palliatus
ENSDNOG00000006795	SND1	100	94.476	ENSCGRG00001022514	Snd1	97	94.476	Cricetulus_griseus_chok1gshd
ENSDNOG00000006795	SND1	99	94.470	ENSCGRG00000012277	Snd1	99	94.470	Cricetulus_griseus_crigri
ENSDNOG00000006795	SND1	100	81.777	ENSCSEG00000008661	snd1	97	81.777	Cynoglossus_semilaevis
ENSDNOG00000006795	SND1	100	82.790	ENSCVAG00000010316	snd1	100	81.193	Cyprinodon_variegatus
ENSDNOG00000006795	SND1	100	83.371	ENSDARG00000006766	snd1	97	83.371	Danio_rerio
ENSDNOG00000006795	SND1	100	95.603	ENSDORG00000000336	Snd1	97	95.603	Dipodomys_ordii
ENSDNOG00000006795	SND1	99	49.454	FBgn0035121	Tudor-SN	97	49.454	Drosophila_melanogaster
ENSDNOG00000006795	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSDNOG00000006795	SND1	62	64.865	ENSEBUG00000014201	-	81	74.432	Eptatretus_burgeri
ENSDNOG00000006795	SND1	100	94.574	ENSEASG00005008513	SND1	97	94.574	Equus_asinus_asinus
ENSDNOG00000006795	SND1	100	96.167	ENSECAG00000011451	SND1	97	96.167	Equus_caballus
ENSDNOG00000006795	SND1	100	84.104	ENSEEUG00000014737	SND1	97	84.104	Erinaceus_europaeus
ENSDNOG00000006795	SND1	99	81.102	ENSELUG00000001805	snd1	94	81.102	Esox_lucius
ENSDNOG00000006795	SND1	100	96.280	ENSFCAG00000008289	SND1	97	96.280	Felis_catus
ENSDNOG00000006795	SND1	100	95.603	ENSFDAG00000015881	SND1	97	95.603	Fukomys_damarensis
ENSDNOG00000006795	SND1	100	80.858	ENSFHEG00000004093	snd1	96	82.532	Fundulus_heteroclitus
ENSDNOG00000006795	SND1	63	74.294	ENSGMOG00000018932	snd1	63	74.294	Gadus_morhua
ENSDNOG00000006795	SND1	100	83.240	ENSGAFG00000008421	snd1	99	83.127	Gambusia_affinis
ENSDNOG00000006795	SND1	100	53.222	ENSGACG00000019793	snd1	97	53.222	Gasterosteus_aculeatus
ENSDNOG00000006795	SND1	100	96.167	ENSGGOG00000009614	SND1	99	96.163	Gorilla_gorilla
ENSDNOG00000006795	SND1	100	82.340	ENSHBUG00000019135	snd1	98	82.340	Haplochromis_burtoni
ENSDNOG00000006795	SND1	100	95.265	ENSHGLG00000003618	SND1	97	95.265	Heterocephalus_glaber_female
ENSDNOG00000006795	SND1	100	95.265	ENSHGLG00100012449	SND1	98	95.265	Heterocephalus_glaber_male
ENSDNOG00000006795	SND1	100	82.002	ENSHCOG00000005266	snd1	97	82.002	Hippocampus_comes
ENSDNOG00000006795	SND1	100	81.706	ENSIPUG00000013279	snd1	97	81.706	Ictalurus_punctatus
ENSDNOG00000006795	SND1	100	95.603	ENSSTOG00000002140	SND1	97	95.603	Ictidomys_tridecemlineatus
ENSDNOG00000006795	SND1	100	95.941	ENSJJAG00000009561	Snd1	97	95.941	Jaculus_jaculus
ENSDNOG00000006795	SND1	100	82.790	ENSKMAG00000016997	snd1	97	82.790	Kryptolebias_marmoratus
ENSDNOG00000006795	SND1	100	83.246	ENSLBEG00000013563	snd1	97	81.440	Labrus_bergylta
ENSDNOG00000006795	SND1	100	83.724	ENSLOCG00000015537	snd1	97	83.724	Lepisosteus_oculatus
ENSDNOG00000006795	SND1	100	95.603	ENSLAFG00000009696	SND1	97	95.603	Loxodonta_africana
ENSDNOG00000006795	SND1	100	96.167	ENSMFAG00000038114	SND1	99	96.163	Macaca_fascicularis
ENSDNOG00000006795	SND1	100	96.167	ENSMMUG00000015432	SND1	97	96.167	Macaca_mulatta
ENSDNOG00000006795	SND1	100	96.167	ENSMNEG00000039808	SND1	100	96.167	Macaca_nemestrina
ENSDNOG00000006795	SND1	100	96.054	ENSMLEG00000029040	SND1	100	96.054	Mandrillus_leucophaeus
ENSDNOG00000006795	SND1	100	82.340	ENSMAMG00000011739	snd1	97	82.340	Mastacembelus_armatus
ENSDNOG00000006795	SND1	100	82.340	ENSMZEG00005005681	snd1	97	82.340	Maylandia_zebra
ENSDNOG00000006795	SND1	100	95.941	ENSMICG00000000097	SND1	97	95.941	Microcebus_murinus
ENSDNOG00000006795	SND1	100	95.378	ENSMOCG00000005040	Snd1	97	95.378	Microtus_ochrogaster
ENSDNOG00000006795	SND1	100	82.677	ENSMMOG00000001795	snd1	97	82.677	Mola_mola
ENSDNOG00000006795	SND1	100	93.236	ENSMODG00000015182	SND1	97	93.236	Monodelphis_domestica
ENSDNOG00000006795	SND1	100	82.115	ENSMALG00000012071	snd1	97	82.115	Monopterus_albus
ENSDNOG00000006795	SND1	100	95.152	MGP_CAROLIEiJ_G0028159	Snd1	97	95.152	Mus_caroli
ENSDNOG00000006795	SND1	100	94.927	ENSMUSG00000001424	Snd1	97	94.927	Mus_musculus
ENSDNOG00000006795	SND1	100	95.152	MGP_PahariEiJ_G0021917	Snd1	97	95.152	Mus_pahari
ENSDNOG00000006795	SND1	100	95.152	MGP_SPRETEiJ_G0029159	Snd1	97	95.152	Mus_spretus
ENSDNOG00000006795	SND1	100	95.716	ENSMPUG00000006545	SND1	97	95.716	Mustela_putorius_furo
ENSDNOG00000006795	SND1	99	94.637	ENSMLUG00000017130	SND1	99	94.637	Myotis_lucifugus
ENSDNOG00000006795	SND1	100	95.039	ENSNGAG00000011186	Snd1	97	95.039	Nannospalax_galili
ENSDNOG00000006795	SND1	100	82.227	ENSNBRG00000006681	snd1	97	82.227	Neolamprologus_brichardi
ENSDNOG00000006795	SND1	100	96.167	ENSNLEG00000012263	SND1	100	96.167	Nomascus_leucogenys
ENSDNOG00000006795	SND1	92	100.000	ENSOPRG00000013405	SND1	90	100.000	Ochotona_princeps
ENSDNOG00000006795	SND1	100	95.603	ENSODEG00000011502	SND1	97	95.603	Octodon_degus
ENSDNOG00000006795	SND1	100	82.340	ENSONIG00000011481	snd1	95	82.340	Oreochromis_niloticus
ENSDNOG00000006795	SND1	99	91.874	ENSOANG00000000817	SND1	97	91.874	Ornithorhynchus_anatinus
ENSDNOG00000006795	SND1	100	94.589	ENSOCUG00000001620	SND1	97	94.589	Oryctolagus_cuniculus
ENSDNOG00000006795	SND1	100	82.115	ENSORLG00000015201	snd1	97	82.115	Oryzias_latipes
ENSDNOG00000006795	SND1	100	82.227	ENSORLG00020013991	snd1	97	82.227	Oryzias_latipes_hni
ENSDNOG00000006795	SND1	100	82.227	ENSORLG00015012436	snd1	97	82.227	Oryzias_latipes_hsok
ENSDNOG00000006795	SND1	100	82.115	ENSOMEG00000006406	snd1	97	82.115	Oryzias_melastigma
ENSDNOG00000006795	SND1	100	96.054	ENSOGAG00000013356	SND1	92	96.054	Otolemur_garnettii
ENSDNOG00000006795	SND1	100	93.123	ENSOARG00000002149	SND1	100	93.123	Ovis_aries
ENSDNOG00000006795	SND1	100	96.054	ENSPPAG00000042947	SND1	99	96.050	Pan_paniscus
ENSDNOG00000006795	SND1	100	96.280	ENSPPRG00000004494	SND1	97	96.280	Panthera_pardus
ENSDNOG00000006795	SND1	100	96.167	ENSPTIG00000014214	SND1	97	96.167	Panthera_tigris_altaica
ENSDNOG00000006795	SND1	100	96.054	ENSPTRG00000023911	SND1	99	96.050	Pan_troglodytes
ENSDNOG00000006795	SND1	99	96.163	ENSPANG00000011997	SND1	99	96.163	Papio_anubis
ENSDNOG00000006795	SND1	100	79.799	ENSPKIG00000023494	snd1	97	79.799	Paramormyrops_kingsleyae
ENSDNOG00000006795	SND1	94	80.884	ENSPMGG00000003629	snd1	100	80.884	Periophthalmus_magnuspinnatus
ENSDNOG00000006795	SND1	100	95.152	ENSPEMG00000010240	Snd1	97	95.152	Peromyscus_maniculatus_bairdii
ENSDNOG00000006795	SND1	99	71.702	ENSPMAG00000007915	-	99	71.702	Petromyzon_marinus
ENSDNOG00000006795	SND1	100	93.687	ENSPCIG00000011561	SND1	97	93.687	Phascolarctos_cinereus
ENSDNOG00000006795	SND1	100	82.677	ENSPFOG00000001557	snd1	97	82.677	Poecilia_formosa
ENSDNOG00000006795	SND1	100	82.677	ENSPLAG00000018459	snd1	95	82.677	Poecilia_latipinna
ENSDNOG00000006795	SND1	100	83.127	ENSPMEG00000006803	snd1	97	83.127	Poecilia_mexicana
ENSDNOG00000006795	SND1	100	83.015	ENSPREG00000002189	snd1	97	83.015	Poecilia_reticulata
ENSDNOG00000006795	SND1	93	95.530	ENSPPYG00000017972	SND1	97	95.530	Pongo_abelii
ENSDNOG00000006795	SND1	100	83.427	ENSPCAG00000011305	SND1	97	83.427	Procavia_capensis
ENSDNOG00000006795	SND1	100	95.941	ENSPCOG00000026791	SND1	100	95.941	Propithecus_coquereli
ENSDNOG00000006795	SND1	100	94.138	ENSPVAG00000013945	SND1	97	94.138	Pteropus_vampyrus
ENSDNOG00000006795	SND1	100	82.340	ENSPNYG00000000932	snd1	97	82.340	Pundamilia_nyererei
ENSDNOG00000006795	SND1	100	82.492	ENSPNAG00000001206	snd1	97	82.492	Pygocentrus_nattereri
ENSDNOG00000006795	SND1	100	94.927	ENSRNOG00000031173	Snd1	100	93.687	Rattus_norvegicus
ENSDNOG00000006795	SND1	75	95.238	ENSRBIG00000027782	-	93	95.238	Rhinopithecus_bieti
ENSDNOG00000006795	SND1	100	96.167	ENSRROG00000033020	SND1	97	96.167	Rhinopithecus_roxellana
ENSDNOG00000006795	SND1	100	96.167	ENSSBOG00000032461	SND1	99	96.163	Saimiri_boliviensis_boliviensis
ENSDNOG00000006795	SND1	99	90.519	ENSSHAG00000015359	SND1	99	90.519	Sarcophilus_harrisii
ENSDNOG00000006795	SND1	99	81.229	ENSSFOG00015001103	snd1	97	81.229	Scleropages_formosus
ENSDNOG00000006795	SND1	100	81.665	ENSSMAG00000001932	snd1	92	81.665	Scophthalmus_maximus
ENSDNOG00000006795	SND1	100	82.790	ENSSDUG00000002699	snd1	91	82.790	Seriola_dumerili
ENSDNOG00000006795	SND1	100	75.618	ENSSLDG00000001950	snd1	97	75.618	Seriola_lalandi_dorsalis
ENSDNOG00000006795	SND1	89	98.113	ENSSARG00000004877	SND1	92	98.113	Sorex_araneus
ENSDNOG00000006795	SND1	75	84.348	ENSSPUG00000017586	SND1	96	84.348	Sphenodon_punctatus
ENSDNOG00000006795	SND1	75	83.803	ENSSPAG00000021398	snd1	95	83.803	Stegastes_partitus
ENSDNOG00000006795	SND1	100	96.054	ENSSSCG00000016590	SND1	97	96.054	Sus_scrofa
ENSDNOG00000006795	SND1	100	81.605	ENSTRUG00000014067	snd1	97	81.215	Takifugu_rubripes
ENSDNOG00000006795	SND1	100	81.890	ENSTNIG00000011019	snd1	97	81.890	Tetraodon_nigroviridis
ENSDNOG00000006795	SND1	96	90.235	ENSTBEG00000003999	SND1	100	90.235	Tupaia_belangeri
ENSDNOG00000006795	SND1	100	91.094	ENSTTRG00000006059	SND1	97	91.094	Tursiops_truncatus
ENSDNOG00000006795	SND1	93	98.106	ENSUAMG00000005604	-	93	98.106	Ursus_americanus
ENSDNOG00000006795	SND1	70	83.611	ENSUAMG00000002820	-	83	83.611	Ursus_americanus
ENSDNOG00000006795	SND1	100	96.167	ENSUMAG00000005960	SND1	97	96.167	Ursus_maritimus
ENSDNOG00000006795	SND1	75	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSDNOG00000006795	SND1	100	96.054	ENSVVUG00000007226	SND1	97	96.054	Vulpes_vulpes
ENSDNOG00000006795	SND1	99	82.638	ENSXETG00000023043	snd1	100	82.534	Xenopus_tropicalis
ENSDNOG00000006795	SND1	95	79.384	ENSXCOG00000013629	snd1	99	79.384	Xiphophorus_couchianus
ENSDNOG00000006795	SND1	100	83.240	ENSXMAG00000011469	snd1	97	83.240	Xiphophorus_maculatus