EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000007983 (Gene tree)
Gene ID: 101435714
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 4960 bases
Position: chrJH567359.1:2449738-2454697
Accession: 101435714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000006190	EXOSC1	PF10447.9	2.2e-15	1	1
ENSDNOP00000006190	ECR1_N	PF14382.6	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000007979	EXOSC1-201	468	XM_004457044	ENSDNOP00000006190	148 (aa)	XP_004457101	UPI0003CBF9DD

Gene Model

Click here to download ENSDNOG00000007983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000007983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000007983	EXOSC1	100	97.297	ENSG00000171311	EXOSC1	86	94.167	Homo_sapiens
ENSDNOG00000007983	EXOSC1	98	76.552	ENSAPOG00000007822	exosc1	74	76.552	Acanthochromis_polyacanthus
ENSDNOG00000007983	EXOSC1	100	98.649	ENSAMEG00000000129	EXOSC1	75	98.649	Ailuropoda_melanoleuca
ENSDNOG00000007983	EXOSC1	93	77.536	ENSACIG00000018956	exosc1	68	77.536	Amphilophus_citrinellus
ENSDNOG00000007983	EXOSC1	98	76.552	ENSAOCG00000010699	exosc1	74	76.552	Amphiprion_ocellaris
ENSDNOG00000007983	EXOSC1	89	64.394	ENSAPEG00000012690	exosc1	68	64.394	Amphiprion_percula
ENSDNOG00000007983	EXOSC1	98	75.862	ENSATEG00000018683	exosc1	74	75.862	Anabas_testudineus
ENSDNOG00000007983	EXOSC1	99	83.562	ENSACAG00000002101	EXOSC1	74	83.562	Anolis_carolinensis
ENSDNOG00000007983	EXOSC1	100	98.649	ENSANAG00000034669	EXOSC1	75	98.649	Aotus_nancymaae
ENSDNOG00000007983	EXOSC1	98	76.552	ENSACLG00000021243	exosc1	74	76.552	Astatotilapia_calliptera
ENSDNOG00000007983	EXOSC1	98	78.621	ENSAMXG00000011116	exosc1	74	78.621	Astyanax_mexicanus
ENSDNOG00000007983	EXOSC1	100	97.973	ENSBTAG00000012699	EXOSC1	75	97.973	Bos_taurus
ENSDNOG00000007983	EXOSC1	94	31.973	WBGene00012966	exos-1	71	31.973	Caenorhabditis_elegans
ENSDNOG00000007983	EXOSC1	100	97.973	ENSCJAG00000016586	EXOSC1	75	97.973	Callithrix_jacchus
ENSDNOG00000007983	EXOSC1	100	97.973	ENSCAFG00000009068	EXOSC1	71	97.973	Canis_familiaris
ENSDNOG00000007983	EXOSC1	100	97.973	ENSCAFG00020006002	EXOSC1	71	97.973	Canis_lupus_dingo
ENSDNOG00000007983	EXOSC1	100	97.973	ENSCHIG00000015253	EXOSC1	75	97.973	Capra_hircus
ENSDNOG00000007983	EXOSC1	100	97.297	ENSTSYG00000000760	EXOSC1	83	97.436	Carlito_syrichta
ENSDNOG00000007983	EXOSC1	100	97.973	ENSCPOG00000001173	EXOSC1	75	97.973	Cavia_porcellus
ENSDNOG00000007983	EXOSC1	79	59.664	ENSCCAG00000023986	EXOSC1	69	59.664	Cebus_capucinus
ENSDNOG00000007983	EXOSC1	100	97.297	ENSCATG00000034114	EXOSC1	86	94.167	Cercocebus_atys
ENSDNOG00000007983	EXOSC1	100	98.649	ENSCLAG00000002463	EXOSC1	75	98.649	Chinchilla_lanigera
ENSDNOG00000007983	EXOSC1	100	97.297	ENSCSAG00000005870	EXOSC1	75	97.297	Chlorocebus_sabaeus
ENSDNOG00000007983	EXOSC1	100	79.730	ENSCHOG00000006477	EXOSC1	78	79.730	Choloepus_hoffmanni
ENSDNOG00000007983	EXOSC1	72	82.075	ENSCPBG00000011949	EXOSC1	88	82.075	Chrysemys_picta_bellii
ENSDNOG00000007983	EXOSC1	95	54.930	ENSCING00000022734	-	67	54.930	Ciona_intestinalis
ENSDNOG00000007983	EXOSC1	95	56.338	ENSCSAVG00000010865	-	72	56.338	Ciona_savignyi
ENSDNOG00000007983	EXOSC1	100	97.297	ENSCANG00000034159	EXOSC1	86	94.167	Colobus_angolensis_palliatus
ENSDNOG00000007983	EXOSC1	100	96.622	ENSCGRG00001000335	Exosc1	75	96.622	Cricetulus_griseus_chok1gshd
ENSDNOG00000007983	EXOSC1	100	96.622	ENSCGRG00000011602	Exosc1	75	96.622	Cricetulus_griseus_crigri
ENSDNOG00000007983	EXOSC1	98	61.379	ENSCSEG00000007895	exosc1	68	61.379	Cynoglossus_semilaevis
ENSDNOG00000007983	EXOSC1	98	74.483	ENSCVAG00000016748	exosc1	74	74.483	Cyprinodon_variegatus
ENSDNOG00000007983	EXOSC1	98	77.931	ENSDARG00000059841	exosc1	74	77.931	Danio_rerio
ENSDNOG00000007983	EXOSC1	100	97.297	ENSDORG00000016528	Exosc1	75	97.297	Dipodomys_ordii
ENSDNOG00000007983	EXOSC1	95	45.070	FBgn0032346	Csl4	68	45.070	Drosophila_melanogaster
ENSDNOG00000007983	EXOSC1	100	94.595	ENSETEG00000002469	-	75	94.595	Echinops_telfairi
ENSDNOG00000007983	EXOSC1	99	55.034	ENSEBUG00000008164	exosc1	74	55.034	Eptatretus_burgeri
ENSDNOG00000007983	EXOSC1	100	84.459	ENSEASG00005008684	EXOSC1	74	84.459	Equus_asinus_asinus
ENSDNOG00000007983	EXOSC1	81	78.333	ENSECAG00000010621	EXOSC1	71	78.333	Equus_caballus
ENSDNOG00000007983	EXOSC1	100	97.973	ENSEEUG00000005647	EXOSC1	75	97.973	Erinaceus_europaeus
ENSDNOG00000007983	EXOSC1	98	76.552	ENSELUG00000017369	exosc1	66	76.552	Esox_lucius
ENSDNOG00000007983	EXOSC1	100	98.649	ENSFCAG00000040563	EXOSC1	85	95.833	Felis_catus
ENSDNOG00000007983	EXOSC1	100	80.405	ENSFALG00000008450	EXOSC1	75	80.405	Ficedula_albicollis
ENSDNOG00000007983	EXOSC1	100	98.649	ENSFDAG00000000846	EXOSC1	75	98.649	Fukomys_damarensis
ENSDNOG00000007983	EXOSC1	98	74.483	ENSFHEG00000009154	exosc1	74	74.483	Fundulus_heteroclitus
ENSDNOG00000007983	EXOSC1	98	77.241	ENSGMOG00000008993	exosc1	74	77.241	Gadus_morhua
ENSDNOG00000007983	EXOSC1	100	66.892	ENSGALG00000039917	EXOSC1	67	85.714	Gallus_gallus
ENSDNOG00000007983	EXOSC1	98	74.483	ENSGAFG00000010265	exosc1	71	74.483	Gambusia_affinis
ENSDNOG00000007983	EXOSC1	98	76.552	ENSGACG00000018936	exosc1	74	76.552	Gasterosteus_aculeatus
ENSDNOG00000007983	EXOSC1	100	83.108	ENSGAGG00000019192	EXOSC1	75	83.108	Gopherus_agassizii
ENSDNOG00000007983	EXOSC1	100	80.405	ENSGGOG00000003099	EXOSC1	82	73.333	Gorilla_gorilla
ENSDNOG00000007983	EXOSC1	98	76.552	ENSHBUG00000017857	exosc1	74	76.761	Haplochromis_burtoni
ENSDNOG00000007983	EXOSC1	100	97.973	ENSHGLG00000016927	EXOSC1	75	97.973	Heterocephalus_glaber_female
ENSDNOG00000007983	EXOSC1	100	97.973	ENSHGLG00100012208	EXOSC1	75	97.973	Heterocephalus_glaber_male
ENSDNOG00000007983	EXOSC1	98	76.552	ENSHCOG00000019882	exosc1	74	76.552	Hippocampus_comes
ENSDNOG00000007983	EXOSC1	98	76.552	ENSIPUG00000007685	exosc1	74	76.552	Ictalurus_punctatus
ENSDNOG00000007983	EXOSC1	100	98.649	ENSSTOG00000006615	EXOSC1	75	98.649	Ictidomys_tridecemlineatus
ENSDNOG00000007983	EXOSC1	83	82.927	ENSSTOG00000029860	-	93	82.927	Ictidomys_tridecemlineatus
ENSDNOG00000007983	EXOSC1	100	97.297	ENSJJAG00000013311	Exosc1	75	97.297	Jaculus_jaculus
ENSDNOG00000007983	EXOSC1	98	75.862	ENSKMAG00000001202	exosc1	61	75.862	Kryptolebias_marmoratus
ENSDNOG00000007983	EXOSC1	98	75.862	ENSLBEG00000011448	exosc1	74	75.862	Labrus_bergylta
ENSDNOG00000007983	EXOSC1	98	51.724	ENSLOCG00000003776	exosc1	65	51.724	Lepisosteus_oculatus
ENSDNOG00000007983	EXOSC1	100	97.297	ENSLAFG00000015983	EXOSC1	75	97.297	Loxodonta_africana
ENSDNOG00000007983	EXOSC1	100	97.297	ENSMFAG00000001493	EXOSC1	86	94.167	Macaca_fascicularis
ENSDNOG00000007983	EXOSC1	100	97.297	ENSMMUG00000020028	EXOSC1	86	94.167	Macaca_mulatta
ENSDNOG00000007983	EXOSC1	100	97.297	ENSMNEG00000029816	EXOSC1	86	94.167	Macaca_nemestrina
ENSDNOG00000007983	EXOSC1	100	89.865	ENSMLEG00000027643	EXOSC1	75	89.865	Mandrillus_leucophaeus
ENSDNOG00000007983	EXOSC1	98	77.241	ENSMAMG00000012200	exosc1	74	77.241	Mastacembelus_armatus
ENSDNOG00000007983	EXOSC1	98	76.552	ENSMZEG00005007042	exosc1	74	76.552	Maylandia_zebra
ENSDNOG00000007983	EXOSC1	100	80.405	ENSMAUG00000020462	-	72	80.405	Mesocricetus_auratus
ENSDNOG00000007983	EXOSC1	100	98.649	ENSMICG00000007664	EXOSC1	70	98.649	Microcebus_murinus
ENSDNOG00000007983	EXOSC1	100	96.622	ENSMOCG00000006004	-	75	96.622	Microtus_ochrogaster
ENSDNOG00000007983	EXOSC1	96	88.732	ENSMOCG00000017124	-	72	88.732	Microtus_ochrogaster
ENSDNOG00000007983	EXOSC1	100	50.676	ENSMMOG00000021403	exosc1	68	50.676	Mola_mola
ENSDNOG00000007983	EXOSC1	100	91.216	ENSMODG00000004213	EXOSC1	75	91.216	Monodelphis_domestica
ENSDNOG00000007983	EXOSC1	93	78.832	ENSMALG00000007061	exosc1	69	78.832	Monopterus_albus
ENSDNOG00000007983	EXOSC1	100	95.946	MGP_CAROLIEiJ_G0022959	Exosc1	75	95.946	Mus_caroli
ENSDNOG00000007983	EXOSC1	100	95.270	ENSMUSG00000034321	Exosc1	75	95.270	Mus_musculus
ENSDNOG00000007983	EXOSC1	100	96.622	MGP_PahariEiJ_G0014449	Exosc1	75	96.622	Mus_pahari
ENSDNOG00000007983	EXOSC1	100	95.946	MGP_SPRETEiJ_G0023880	Exosc1	75	95.946	Mus_spretus
ENSDNOG00000007983	EXOSC1	100	98.649	ENSMPUG00000017044	EXOSC1	75	98.649	Mustela_putorius_furo
ENSDNOG00000007983	EXOSC1	100	97.973	ENSMLUG00000009228	EXOSC1	75	97.973	Myotis_lucifugus
ENSDNOG00000007983	EXOSC1	100	95.270	ENSNGAG00000022033	Exosc1	75	95.270	Nannospalax_galili
ENSDNOG00000007983	EXOSC1	98	51.034	ENSNBRG00000024007	exosc1	67	51.034	Neolamprologus_brichardi
ENSDNOG00000007983	EXOSC1	100	96.622	ENSNLEG00000013872	EXOSC1	86	93.333	Nomascus_leucogenys
ENSDNOG00000007983	EXOSC1	78	90.517	ENSMEUG00000002246	EXOSC1	100	90.517	Notamacropus_eugenii
ENSDNOG00000007983	EXOSC1	100	96.622	ENSOPRG00000005065	EXOSC1	75	96.622	Ochotona_princeps
ENSDNOG00000007983	EXOSC1	100	97.973	ENSODEG00000016709	EXOSC1	75	97.973	Octodon_degus
ENSDNOG00000007983	EXOSC1	98	76.552	ENSONIG00000017683	exosc1	74	76.552	Oreochromis_niloticus
ENSDNOG00000007983	EXOSC1	51	94.737	ENSOANG00000006563	EXOSC1	60	94.737	Ornithorhynchus_anatinus
ENSDNOG00000007983	EXOSC1	100	96.644	ENSOCUG00000011898	-	76	96.644	Oryctolagus_cuniculus
ENSDNOG00000007983	EXOSC1	100	91.892	ENSOCUG00000026461	-	75	91.892	Oryctolagus_cuniculus
ENSDNOG00000007983	EXOSC1	98	76.552	ENSORLG00000011595	exosc1	74	76.552	Oryzias_latipes
ENSDNOG00000007983	EXOSC1	98	76.552	ENSORLG00020005831	exosc1	74	76.552	Oryzias_latipes_hni
ENSDNOG00000007983	EXOSC1	98	76.552	ENSORLG00015004317	exosc1	74	76.552	Oryzias_latipes_hsok
ENSDNOG00000007983	EXOSC1	98	55.862	ENSOMEG00000013907	exosc1	72	55.862	Oryzias_melastigma
ENSDNOG00000007983	EXOSC1	100	98.649	ENSOGAG00000016259	EXOSC1	75	98.649	Otolemur_garnettii
ENSDNOG00000007983	EXOSC1	100	97.297	ENSOARG00000010136	EXOSC1	75	97.297	Ovis_aries
ENSDNOG00000007983	EXOSC1	100	89.333	ENSPPAG00000039842	EXOSC1	76	89.333	Pan_paniscus
ENSDNOG00000007983	EXOSC1	100	98.649	ENSPPRG00000023366	EXOSC1	85	95.833	Panthera_pardus
ENSDNOG00000007983	EXOSC1	100	98.649	ENSPTIG00000017701	EXOSC1	85	95.833	Panthera_tigris_altaica
ENSDNOG00000007983	EXOSC1	100	97.297	ENSPTRG00000002808	EXOSC1	86	94.167	Pan_troglodytes
ENSDNOG00000007983	EXOSC1	100	97.297	ENSPANG00000021324	EXOSC1	86	94.167	Papio_anubis
ENSDNOG00000007983	EXOSC1	98	77.241	ENSPKIG00000016037	exosc1	74	77.241	Paramormyrops_kingsleyae
ENSDNOG00000007983	EXOSC1	66	78.571	ENSPSIG00000013571	EXOSC1	60	75.676	Pelodiscus_sinensis
ENSDNOG00000007983	EXOSC1	98	62.069	ENSPMGG00000014002	exosc1	70	62.069	Periophthalmus_magnuspinnatus
ENSDNOG00000007983	EXOSC1	100	96.622	ENSPEMG00000010710	-	75	96.622	Peromyscus_maniculatus_bairdii
ENSDNOG00000007983	EXOSC1	93	70.290	ENSPMAG00000000195	exosc1	70	70.290	Petromyzon_marinus
ENSDNOG00000007983	EXOSC1	100	91.892	ENSPCIG00000002210	EXOSC1	75	91.892	Phascolarctos_cinereus
ENSDNOG00000007983	EXOSC1	98	73.793	ENSPFOG00000006755	exosc1	71	73.793	Poecilia_formosa
ENSDNOG00000007983	EXOSC1	98	73.793	ENSPLAG00000005880	exosc1	74	73.793	Poecilia_latipinna
ENSDNOG00000007983	EXOSC1	98	73.793	ENSPMEG00000015598	exosc1	71	73.793	Poecilia_mexicana
ENSDNOG00000007983	EXOSC1	98	61.379	ENSPREG00000000405	exosc1	66	61.379	Poecilia_reticulata
ENSDNOG00000007983	EXOSC1	100	96.622	ENSPPYG00000002531	EXOSC1	75	96.622	Pongo_abelii
ENSDNOG00000007983	EXOSC1	100	97.297	ENSPCAG00000009135	EXOSC1	75	97.297	Procavia_capensis
ENSDNOG00000007983	EXOSC1	100	90.541	ENSPCOG00000027539	EXOSC1	80	98.077	Propithecus_coquereli
ENSDNOG00000007983	EXOSC1	100	98.649	ENSPVAG00000003372	EXOSC1	75	98.649	Pteropus_vampyrus
ENSDNOG00000007983	EXOSC1	98	76.552	ENSPNYG00000021745	exosc1	74	76.552	Pundamilia_nyererei
ENSDNOG00000007983	EXOSC1	98	77.241	ENSPNAG00000001944	exosc1	74	77.241	Pygocentrus_nattereri
ENSDNOG00000007983	EXOSC1	100	96.622	ENSRNOG00000048708	Exosc1	75	96.622	Rattus_norvegicus
ENSDNOG00000007983	EXOSC1	100	97.297	ENSRBIG00000035618	EXOSC1	86	94.167	Rhinopithecus_bieti
ENSDNOG00000007983	EXOSC1	100	97.297	ENSRROG00000032589	EXOSC1	86	94.167	Rhinopithecus_roxellana
ENSDNOG00000007983	EXOSC1	100	98.649	ENSSBOG00000000359	EXOSC1	75	98.649	Saimiri_boliviensis_boliviensis
ENSDNOG00000007983	EXOSC1	66	96.939	ENSSHAG00000018219	EXOSC1	67	96.939	Sarcophilus_harrisii
ENSDNOG00000007983	EXOSC1	97	75.694	ENSSFOG00015016289	-	74	75.694	Scleropages_formosus
ENSDNOG00000007983	EXOSC1	98	79.310	ENSSFOG00015009069	exosc1	74	79.310	Scleropages_formosus
ENSDNOG00000007983	EXOSC1	98	77.241	ENSSMAG00000003721	exosc1	74	77.241	Scophthalmus_maximus
ENSDNOG00000007983	EXOSC1	98	76.552	ENSSDUG00000002993	exosc1	74	76.552	Seriola_dumerili
ENSDNOG00000007983	EXOSC1	98	76.552	ENSSLDG00000025181	exosc1	74	76.552	Seriola_lalandi_dorsalis
ENSDNOG00000007983	EXOSC1	100	79.730	ENSSARG00000000162	EXOSC1	75	79.730	Sorex_araneus
ENSDNOG00000007983	EXOSC1	100	81.757	ENSSPUG00000012263	EXOSC1	75	81.757	Sphenodon_punctatus
ENSDNOG00000007983	EXOSC1	98	65.517	ENSSPAG00000016792	exosc1	60	65.517	Stegastes_partitus
ENSDNOG00000007983	EXOSC1	100	97.297	ENSSSCG00000010518	EXOSC1	69	97.297	Sus_scrofa
ENSDNOG00000007983	EXOSC1	98	78.621	ENSTGUG00000009692	EXOSC1	74	78.621	Taeniopygia_guttata
ENSDNOG00000007983	EXOSC1	97	72.727	ENSTRUG00000007706	exosc1	74	72.727	Takifugu_rubripes
ENSDNOG00000007983	EXOSC1	97	73.427	ENSTNIG00000014079	exosc1	72	73.427	Tetraodon_nigroviridis
ENSDNOG00000007983	EXOSC1	100	87.162	ENSTBEG00000006011	EXOSC1	75	87.162	Tupaia_belangeri
ENSDNOG00000007983	EXOSC1	92	98.529	ENSTTRG00000009887	EXOSC1	74	98.529	Tursiops_truncatus
ENSDNOG00000007983	EXOSC1	100	76.351	ENSUAMG00000010266	EXOSC1	73	76.351	Ursus_americanus
ENSDNOG00000007983	EXOSC1	100	76.351	ENSUMAG00000022002	EXOSC1	73	76.351	Ursus_maritimus
ENSDNOG00000007983	EXOSC1	98	74.483	ENSXETG00000003434	exosc1	74	74.483	Xenopus_tropicalis
ENSDNOG00000007983	EXOSC1	98	62.069	ENSXMAG00000023382	exosc1	66	62.069	Xiphophorus_maculatus