EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000008637 (Gene tree)
Gene ID: 101438263
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 90803 bases
Position: chrJH571788.1:211694-302496
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000006718	SpoU_methylase	PF00588.19	4.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000008679	TARBP1-201	4968	-	ENSDNOP00000006718	1655 (aa)	-	UPI0003CBE142
ENSDNOT00000051650	TARBP1-202	3433	-	ENSDNOP00000023987	1019 (aa)	-	UPI0003CBE7C1

Gene Model

Click here to download ENSDNOG00000008637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000008637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000008637	TARBP1	99	83.635	ENSG00000059588	TARBP1	99	83.756	Homo_sapiens
ENSDNOG00000008637	TARBP1	99	42.002	ENSAPOG00000016419	si:dkey-85a20.4	85	45.094	Acanthochromis_polyacanthus
ENSDNOG00000008637	TARBP1	83	85.850	ENSAMEG00000003359	TARBP1	99	85.850	Ailuropoda_melanoleuca
ENSDNOG00000008637	TARBP1	99	42.149	ENSATEG00000020266	si:dkey-85a20.4	92	43.843	Anabas_testudineus
ENSDNOG00000008637	TARBP1	82	67.733	ENSAPLG00000007666	TARBP1	99	68.764	Anas_platyrhynchos
ENSDNOG00000008637	TARBP1	99	57.177	ENSACAG00000001142	TARBP1	99	56.509	Anolis_carolinensis
ENSDNOG00000008637	TARBP1	90	83.036	ENSANAG00000022031	TARBP1	99	76.542	Aotus_nancymaae
ENSDNOG00000008637	TARBP1	99	82.275	ENSBTAG00000004517	TARBP1	99	84.872	Bos_taurus
ENSDNOG00000008637	TARBP1	99	82.367	ENSCJAG00000018155	TARBP1	99	82.669	Callithrix_jacchus
ENSDNOG00000008637	TARBP1	87	84.716	ENSCAFG00000011533	TARBP1	99	85.004	Canis_familiaris
ENSDNOG00000008637	TARBP1	99	81.130	ENSCAFG00020027141	TARBP1	99	82.272	Canis_lupus_dingo
ENSDNOG00000008637	TARBP1	99	81.318	ENSCHIG00000011437	TARBP1	99	80.921	Capra_hircus
ENSDNOG00000008637	TARBP1	80	85.877	ENSTSYG00000010382	TARBP1	97	85.953	Carlito_syrichta
ENSDNOG00000008637	TARBP1	77	68.355	ENSCAPG00000010831	TARBP1	99	68.433	Cavia_aperea
ENSDNOG00000008637	TARBP1	99	73.547	ENSCPOG00000013995	TARBP1	99	73.366	Cavia_porcellus
ENSDNOG00000008637	TARBP1	99	82.971	ENSCCAG00000037278	TARBP1	99	83.092	Cebus_capucinus
ENSDNOG00000008637	TARBP1	99	82.971	ENSCATG00000011754	TARBP1	99	83.394	Cercocebus_atys
ENSDNOG00000008637	TARBP1	82	78.099	ENSCLAG00000003655	TARBP1	99	78.175	Chinchilla_lanigera
ENSDNOG00000008637	TARBP1	78	86.610	ENSCSAG00000010100	TARBP1	99	86.610	Chlorocebus_sabaeus
ENSDNOG00000008637	TARBP1	94	65.517	ENSCPBG00000005587	TARBP1	98	64.391	Chrysemys_picta_bellii
ENSDNOG00000008637	TARBP1	82	86.950	ENSCANG00000034343	TARBP1	99	86.950	Colobus_angolensis_palliatus
ENSDNOG00000008637	TARBP1	99	72.044	ENSCGRG00001016690	Tarbp1	99	70.952	Cricetulus_griseus_chok1gshd
ENSDNOG00000008637	TARBP1	89	74.069	ENSCGRG00000016893	Tarbp1	98	74.470	Cricetulus_griseus_crigri
ENSDNOG00000008637	TARBP1	99	39.378	ENSCSEG00000005255	si:dkey-85a20.4	93	45.634	Cynoglossus_semilaevis
ENSDNOG00000008637	TARBP1	86	43.953	ENSDARG00000079055	si:dkey-85a20.4	99	53.873	Danio_rerio
ENSDNOG00000008637	TARBP1	79	73.696	ENSDORG00000007984	Tarbp1	100	73.599	Dipodomys_ordii
ENSDNOG00000008637	TARBP1	99	85.344	ENSEASG00005000252	TARBP1	99	85.163	Equus_asinus_asinus
ENSDNOG00000008637	TARBP1	99	85.223	ENSECAG00000023673	TARBP1	99	88.043	Equus_caballus
ENSDNOG00000008637	TARBP1	84	44.163	ENSELUG00000012193	si:dkey-85a20.4	86	44.093	Esox_lucius
ENSDNOG00000008637	TARBP1	99	80.277	ENSFCAG00000014183	TARBP1	99	80.097	Felis_catus
ENSDNOG00000008637	TARBP1	79	68.698	ENSFALG00000013565	TARBP1	100	68.254	Ficedula_albicollis
ENSDNOG00000008637	TARBP1	78	75.000	ENSFDAG00000001308	TARBP1	99	75.076	Fukomys_damarensis
ENSDNOG00000008637	TARBP1	96	51.813	ENSFHEG00000007565	si:dkey-85a20.4	94	55.125	Fundulus_heteroclitus
ENSDNOG00000008637	TARBP1	82	43.516	ENSGMOG00000004549	si:dkey-85a20.4	98	43.588	Gadus_morhua
ENSDNOG00000008637	TARBP1	97	64.542	ENSGALG00000011000	TARBP1	99	64.772	Gallus_gallus
ENSDNOG00000008637	TARBP1	99	41.152	ENSGAFG00000007387	si:dkey-85a20.4	91	42.848	Gambusia_affinis
ENSDNOG00000008637	TARBP1	84	45.275	ENSGACG00000005865	si:dkey-85a20.4	99	45.275	Gasterosteus_aculeatus
ENSDNOG00000008637	TARBP1	98	69.210	ENSGAGG00000012102	TARBP1	100	65.189	Gopherus_agassizii
ENSDNOG00000008637	TARBP1	83	83.890	ENSGGOG00000022879	TARBP1	99	83.962	Gorilla_gorilla
ENSDNOG00000008637	TARBP1	94	44.186	ENSHBUG00000008877	si:dkey-85a20.4	85	46.503	Haplochromis_burtoni
ENSDNOG00000008637	TARBP1	99	74.592	ENSHGLG00000011592	TARBP1	99	74.274	Heterocephalus_glaber_female
ENSDNOG00000008637	TARBP1	96	76.401	ENSHGLG00100015169	TARBP1	99	76.125	Heterocephalus_glaber_male
ENSDNOG00000008637	TARBP1	99	39.845	ENSIPUG00000005249	si:dkey-85a20.4	83	42.686	Ictalurus_punctatus
ENSDNOG00000008637	TARBP1	86	75.962	ENSSTOG00000032291	TARBP1	99	77.778	Ictidomys_tridecemlineatus
ENSDNOG00000008637	TARBP1	94	70.868	ENSJJAG00000017840	Tarbp1	99	70.868	Jaculus_jaculus
ENSDNOG00000008637	TARBP1	80	47.582	ENSKMAG00000017546	si:dkey-85a20.4	76	48.267	Kryptolebias_marmoratus
ENSDNOG00000008637	TARBP1	64	50.734	ENSLBEG00000012132	si:dkey-85a20.4	83	50.868	Labrus_bergylta
ENSDNOG00000008637	TARBP1	99	52.070	ENSLACG00000004337	TARBP1	99	51.741	Latimeria_chalumnae
ENSDNOG00000008637	TARBP1	99	45.851	ENSLOCG00000016214	si:dkey-85a20.4	85	49.823	Lepisosteus_oculatus
ENSDNOG00000008637	TARBP1	96	85.139	ENSLAFG00000011394	TARBP1	99	84.887	Loxodonta_africana
ENSDNOG00000008637	TARBP1	99	80.725	ENSMFAG00000041068	TARBP1	99	80.665	Macaca_fascicularis
ENSDNOG00000008637	TARBP1	99	81.073	ENSMMUG00000021703	TARBP1	99	81.073	Macaca_mulatta
ENSDNOG00000008637	TARBP1	99	83.454	ENSMNEG00000045002	TARBP1	99	83.514	Macaca_nemestrina
ENSDNOG00000008637	TARBP1	82	87.004	ENSMLEG00000044182	TARBP1	99	87.004	Mandrillus_leucophaeus
ENSDNOG00000008637	TARBP1	95	44.077	ENSMAMG00000021760	si:dkey-85a20.4	93	44.725	Mastacembelus_armatus
ENSDNOG00000008637	TARBP1	94	44.123	ENSMZEG00005005751	si:dkey-85a20.4	85	46.434	Maylandia_zebra
ENSDNOG00000008637	TARBP1	99	71.152	ENSMAUG00000020968	Tarbp1	99	70.285	Mesocricetus_auratus
ENSDNOG00000008637	TARBP1	99	74.955	ENSMICG00000015280	TARBP1	99	75.440	Microcebus_murinus
ENSDNOG00000008637	TARBP1	99	70.449	ENSMOCG00000004128	Tarbp1	99	70.206	Microtus_ochrogaster
ENSDNOG00000008637	TARBP1	99	41.068	ENSMMOG00000007795	si:dkey-85a20.4	91	42.595	Mola_mola
ENSDNOG00000008637	TARBP1	99	73.453	ENSMODG00000008504	TARBP1	100	73.453	Monodelphis_domestica
ENSDNOG00000008637	TARBP1	93	43.122	ENSMALG00000002916	si:dkey-85a20.4	91	43.397	Monopterus_albus
ENSDNOG00000008637	TARBP1	99	70.285	MGP_CAROLIEiJ_G0031729	Tarbp1	99	69.660	Mus_caroli
ENSDNOG00000008637	TARBP1	99	69.982	ENSMUSG00000090290	Tarbp1	99	69.782	Mus_musculus
ENSDNOG00000008637	TARBP1	99	70.521	MGP_PahariEiJ_G0023326	Tarbp1	99	70.321	Mus_pahari
ENSDNOG00000008637	TARBP1	99	70.164	MGP_SPRETEiJ_G0032846	Tarbp1	99	69.964	Mus_spretus
ENSDNOG00000008637	TARBP1	75	82.839	ENSMPUG00000002802	TARBP1	99	82.678	Mustela_putorius_furo
ENSDNOG00000008637	TARBP1	83	75.237	ENSMLUG00000002414	TARBP1	99	75.346	Myotis_lucifugus
ENSDNOG00000008637	TARBP1	99	83.635	ENSNLEG00000002518	TARBP1	99	83.756	Nomascus_leucogenys
ENSDNOG00000008637	TARBP1	68	79.070	ENSMEUG00000011370	-	67	79.070	Notamacropus_eugenii
ENSDNOG00000008637	TARBP1	70	86.424	ENSOPRG00000013822	TARBP1	71	86.424	Ochotona_princeps
ENSDNOG00000008637	TARBP1	92	73.705	ENSODEG00000005238	TARBP1	99	74.748	Octodon_degus
ENSDNOG00000008637	TARBP1	84	46.321	ENSONIG00000009789	si:dkey-85a20.4	99	46.186	Oreochromis_niloticus
ENSDNOG00000008637	TARBP1	99	83.020	ENSOCUG00000017418	TARBP1	99	83.152	Oryctolagus_cuniculus
ENSDNOG00000008637	TARBP1	99	39.739	ENSORLG00000010529	si:dkey-85a20.4	87	42.574	Oryzias_latipes
ENSDNOG00000008637	TARBP1	99	39.846	ENSORLG00020019264	si:dkey-85a20.4	87	42.700	Oryzias_latipes_hni
ENSDNOG00000008637	TARBP1	99	39.444	ENSORLG00015003276	si:dkey-85a20.4	87	42.574	Oryzias_latipes_hsok
ENSDNOG00000008637	TARBP1	99	80.230	ENSOGAG00000002379	TARBP1	100	80.230	Otolemur_garnettii
ENSDNOG00000008637	TARBP1	99	83.414	ENSOARG00000003434	TARBP1	99	82.920	Ovis_aries
ENSDNOG00000008637	TARBP1	83	87.153	ENSPPAG00000028097	TARBP1	99	87.226	Pan_paniscus
ENSDNOG00000008637	TARBP1	95	82.217	ENSPPRG00000013561	TARBP1	98	84.918	Panthera_pardus
ENSDNOG00000008637	TARBP1	82	86.074	ENSPTIG00000009281	TARBP1	99	86.202	Panthera_tigris_altaica
ENSDNOG00000008637	TARBP1	99	83.534	ENSPTRG00000002124	TARBP1	99	83.534	Pan_troglodytes
ENSDNOG00000008637	TARBP1	99	83.394	ENSPANG00000021933	TARBP1	99	83.454	Papio_anubis
ENSDNOG00000008637	TARBP1	99	42.916	ENSPKIG00000016716	si:dkey-85a20.4	85	46.336	Paramormyrops_kingsleyae
ENSDNOG00000008637	TARBP1	78	70.547	ENSPSIG00000010699	TARBP1	100	70.316	Pelodiscus_sinensis
ENSDNOG00000008637	TARBP1	96	74.431	ENSPEMG00000006888	Tarbp1	99	74.431	Peromyscus_maniculatus_bairdii
ENSDNOG00000008637	TARBP1	92	86.408	ENSPCIG00000029710	TARBP1	99	86.408	Phascolarctos_cinereus
ENSDNOG00000008637	TARBP1	84	44.934	ENSPFOG00000013020	si:dkey-85a20.4	99	45.003	Poecilia_formosa
ENSDNOG00000008637	TARBP1	99	41.518	ENSPLAG00000006044	si:dkey-85a20.4	91	43.226	Poecilia_latipinna
ENSDNOG00000008637	TARBP1	99	41.426	ENSPMEG00000017857	si:dkey-85a20.4	91	43.097	Poecilia_mexicana
ENSDNOG00000008637	TARBP1	91	43.588	ENSPREG00000022753	si:dkey-85a20.4	91	43.243	Poecilia_reticulata
ENSDNOG00000008637	TARBP1	91	86.457	ENSPPYG00000000102	TARBP1	99	86.457	Pongo_abelii
ENSDNOG00000008637	TARBP1	85	92.982	ENSPCAG00000004808	TARBP1	85	92.982	Procavia_capensis
ENSDNOG00000008637	TARBP1	99	81.065	ENSPCOG00000005666	TARBP1	99	80.823	Propithecus_coquereli
ENSDNOG00000008637	TARBP1	99	67.131	ENSPVAG00000014798	TARBP1	99	67.010	Pteropus_vampyrus
ENSDNOG00000008637	TARBP1	94	43.199	ENSPNYG00000019135	si:dkey-85a20.4	85	45.340	Pundamilia_nyererei
ENSDNOG00000008637	TARBP1	99	66.019	ENSRNOG00000053574	Tarbp1	99	65.170	Rattus_norvegicus
ENSDNOG00000008637	TARBP1	99	79.048	ENSRBIG00000043362	TARBP1	99	87.500	Rhinopithecus_bieti
ENSDNOG00000008637	TARBP1	99	77.972	ENSRROG00000029527	TARBP1	99	79.807	Rhinopithecus_roxellana
ENSDNOG00000008637	TARBP1	86	86.985	ENSSBOG00000034503	TARBP1	99	86.985	Saimiri_boliviensis_boliviensis
ENSDNOG00000008637	TARBP1	82	76.492	ENSSHAG00000000013	TARBP1	99	76.050	Sarcophilus_harrisii
ENSDNOG00000008637	TARBP1	82	44.899	ENSSFOG00015002660	si:dkey-85a20.4	96	45.970	Scleropages_formosus
ENSDNOG00000008637	TARBP1	82	46.638	ENSSMAG00000007081	si:dkey-85a20.4	91	44.537	Scophthalmus_maximus
ENSDNOG00000008637	TARBP1	99	41.488	ENSSDUG00000023566	si:dkey-85a20.4	92	42.718	Seriola_dumerili
ENSDNOG00000008637	TARBP1	99	43.026	ENSSLDG00000020200	si:dkey-85a20.4	92	44.502	Seriola_lalandi_dorsalis
ENSDNOG00000008637	TARBP1	89	87.760	ENSSARG00000012207	TARBP1	89	87.760	Sorex_araneus
ENSDNOG00000008637	TARBP1	99	64.127	ENSSPUG00000015364	TARBP1	100	63.158	Sphenodon_punctatus
ENSDNOG00000008637	TARBP1	99	42.289	ENSSPAG00000007213	si:dkey-85a20.4	92	43.366	Stegastes_partitus
ENSDNOG00000008637	TARBP1	99	83.354	ENSSSCG00000010160	TARBP1	99	85.179	Sus_scrofa
ENSDNOG00000008637	TARBP1	79	68.441	ENSTGUG00000010214	TARBP1	100	68.365	Taeniopygia_guttata
ENSDNOG00000008637	TARBP1	92	40.438	ENSTNIG00000016586	si:dkey-85a20.4	99	44.676	Tetraodon_nigroviridis
ENSDNOG00000008637	TARBP1	91	83.447	ENSTTRG00000008707	TARBP1	95	82.992	Tursiops_truncatus
ENSDNOG00000008637	TARBP1	81	85.607	ENSUMAG00000006730	TARBP1	99	85.607	Ursus_maritimus
ENSDNOG00000008637	TARBP1	71	90.625	ENSVPAG00000007665	TARBP1	79	90.625	Vicugna_pacos
ENSDNOG00000008637	TARBP1	84	85.683	ENSVVUG00000007460	TARBP1	97	85.807	Vulpes_vulpes
ENSDNOG00000008637	TARBP1	82	55.887	ENSXETG00000016224	tarbp1	99	55.782	Xenopus_tropicalis
ENSDNOG00000008637	TARBP1	79	49.660	ENSXCOG00000011779	si:dkey-85a20.4	93	49.729	Xiphophorus_couchianus
ENSDNOG00000008637	TARBP1	64	42.739	ENSXMAG00000009600	si:dkey-85a20.4	100	42.831	Xiphophorus_maculatus