EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSDNOG00000008665 (Gene tree)
Gene ID
101428514
Gene Symbol
UPF3B
Alias
HUPF3B|MRX62|RENT3B|UPF3BP1|UPF3BP2|UPF3BP3|UPF3X
Full Name
UPF3B%2C regulator of nonsense mediated mRNA decay
Gene Type
protein_coding
Species
Dasypus_novemcinctus
Status
putative
Strand
Plus strand
Length
12795 bases
Position
chrJH569834.1:39779-52573
Accession
101428514
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDNOP00000006707Smg4_UPF3PF03467.152.5e-5411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDNOT00000008661UPF3B-2011576-ENSDNOP00000006707483 (aa)XP_004467549UPI000328C7A5
Gene Model
Click here to download ENSDNOG00000008665's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000008665's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDNOG00000008665UPF3B8548.578ENSG00000169062UPF3A8647.439Homo_sapiens
ENSDNOG00000008665UPF3B10094.617ENSG00000125351UPF3B10094.617Homo_sapiens
ENSDNOG00000008665UPF3B9656.211ENSAPOG00000012775upf3b9656.211Acanthochromis_polyacanthus
ENSDNOG00000008665UPF3B10095.445ENSAMEG00000000163UPF3B10095.445Ailuropoda_melanoleuca
ENSDNOG00000008665UPF3B9043.468ENSAMEG00000004259UPF3A9043.409Ailuropoda_melanoleuca
ENSDNOG00000008665UPF3B9452.575ENSACIG00000013582upf3b9450.964Amphilophus_citrinellus
ENSDNOG00000008665UPF3B9654.757ENSAOCG00000000706upf3b9655.085Amphiprion_ocellaris
ENSDNOG00000008665UPF3B9656.329ENSAPEG00000005545upf3b9656.421Amphiprion_percula
ENSDNOG00000008665UPF3B9457.112ENSATEG00000018742upf3b9457.849Anabas_testudineus
ENSDNOG00000008665UPF3B9167.411ENSACAG00000003625UPF3B9964.826Anolis_carolinensis
ENSDNOG00000008665UPF3B10086.749ENSANAG00000025598-10092.920Aotus_nancymaae
ENSDNOG00000008665UPF3B10095.031ENSANAG00000021894-10097.026Aotus_nancymaae
ENSDNOG00000008665UPF3B5670.260ENSANAG00000033169-9369.517Aotus_nancymaae
ENSDNOG00000008665UPF3B9656.329ENSACLG00000001649upf3b9756.540Astatotilapia_calliptera
ENSDNOG00000008665UPF3B5660.777ENSAMXG00000000199upf3b8858.865Astyanax_mexicanus
ENSDNOG00000008665UPF3B6797.770ENSBTAG00000035615UPF3B10097.770Bos_taurus
ENSDNOG00000008665UPF3B10094.203ENSCJAG00000004975UPF3B10096.654Callithrix_jacchus
ENSDNOG00000008665UPF3B8547.608ENSCJAG00000019102UPF3A8641.403Callithrix_jacchus
ENSDNOG00000008665UPF3B10094.617ENSCAFG00000018426UPF3B10094.617Canis_familiaris
ENSDNOG00000008665UPF3B10089.648ENSCAFG00020004074UPF3B10094.872Canis_lupus_dingo
ENSDNOG00000008665UPF3B9160.959ENSCHIG00000011454-9859.179Capra_hircus
ENSDNOG00000008665UPF3B10094.617ENSCHIG00000000247-10094.617Capra_hircus
ENSDNOG00000008665UPF3B9894.703ENSCHIG00000018011-10097.398Capra_hircus
ENSDNOG00000008665UPF3B10091.925ENSTSYG00000014690UPF3B10095.161Carlito_syrichta
ENSDNOG00000008665UPF3B8547.981ENSCCAG00000018406UPF3A8642.568Cebus_capucinus
ENSDNOG00000008665UPF3B7069.014ENSCCAG00000021964-10069.014Cebus_capucinus
ENSDNOG00000008665UPF3B9259.111ENSCCAG00000029813-8769.630Cebus_capucinus
ENSDNOG00000008665UPF3B8548.815ENSCATG00000029733UPF3A8646.771Cercocebus_atys
ENSDNOG00000008665UPF3B10094.410ENSCATG00000017506UPF3B10096.654Cercocebus_atys
ENSDNOG00000008665UPF3B10089.234ENSCLAG00000003260UPF3B10089.234Chinchilla_lanigera
ENSDNOG00000008665UPF3B10094.617ENSCSAG00000018348UPF3B10094.617Chlorocebus_sabaeus
ENSDNOG00000008665UPF3B8548.235ENSCSAG00000017388UPF3A8642.188Chlorocebus_sabaeus
ENSDNOG00000008665UPF3B9963.265ENSCPBG00000020685UPF3B9963.265Chrysemys_picta_bellii
ENSDNOG00000008665UPF3B7096.654ENSCANG00000029220UPF3B10096.654Colobus_angolensis_palliatus
ENSDNOG00000008665UPF3B10080.206ENSCGRG00001006858-10080.412Cricetulus_griseus_chok1gshd
ENSDNOG00000008665UPF3B7579.121ENSCGRG00001013643-9476.389Cricetulus_griseus_chok1gshd
ENSDNOG00000008665UPF3B8981.755ENSCGRG00000007627Upf3b10081.986Cricetulus_griseus_crigri
ENSDNOG00000008665UPF3B9355.195ENSCSEG00000002046upf3b9056.250Cynoglossus_semilaevis
ENSDNOG00000008665UPF3B9353.348ENSCVAG00000005030upf3b9651.351Cyprinodon_variegatus
ENSDNOG00000008665UPF3B9855.967ENSDARG00000000489upf3b9756.379Danio_rerio
ENSDNOG00000008665UPF3B10084.679ENSDORG00000006077Upf3b10084.679Dipodomys_ordii
ENSDNOG00000008665UPF3B9049.107ENSEASG00005021884UPF3A8643.764Equus_asinus_asinus
ENSDNOG00000008665UPF3B9990.456ENSEASG00005012919UPF3B10094.690Equus_asinus_asinus
ENSDNOG00000008665UPF3B9990.456ENSECAG00000016947UPF3B10091.912Equus_caballus
ENSDNOG00000008665UPF3B9049.217ENSECAG00000017141UPF3A8643.764Equus_caballus
ENSDNOG00000008665UPF3B10050.192ENSELUG00000020389upf3b10050.097Esox_lucius
ENSDNOG00000008665UPF3B9445.228ENSFCAG00000014602UPF3A8742.534Felis_catus
ENSDNOG00000008665UPF3B10093.814ENSFCAG00000004388UPF3B10094.433Felis_catus
ENSDNOG00000008665UPF3B9965.490ENSFALG00000001569UPF3B9966.071Ficedula_albicollis
ENSDNOG00000008665UPF3B10089.855ENSFDAG00000018869UPF3B10089.855Fukomys_damarensis
ENSDNOG00000008665UPF3B9352.268ENSFHEG00000017895upf3b9351.957Fundulus_heteroclitus
ENSDNOG00000008665UPF3B9354.310ENSGMOG00000001621upf3b9355.172Gadus_morhua
ENSDNOG00000008665UPF3B9166.079ENSGALG00000008618UPF3B9966.870Gallus_gallus
ENSDNOG00000008665UPF3B9652.677ENSGAFG00000000829upf3b9653.632Gambusia_affinis
ENSDNOG00000008665UPF3B9256.018ENSGACG00000017435upf3b9467.647Gasterosteus_aculeatus
ENSDNOG00000008665UPF3B9965.714ENSGAGG00000001219UPF3B9965.714Gopherus_agassizii
ENSDNOG00000008665UPF3B8340.723ENSGGOG00000041219-8638.200Gorilla_gorilla
ENSDNOG00000008665UPF3B8340.723ENSGGOG00000043074-8138.257Gorilla_gorilla
ENSDNOG00000008665UPF3B10094.617ENSGGOG00000023995UPF3B10096.654Gorilla_gorilla
ENSDNOG00000008665UPF3B8548.341ENSGGOG00000015428UPF3A8647.216Gorilla_gorilla
ENSDNOG00000008665UPF3B9656.118ENSHBUG00000017393upf3b9756.329Haplochromis_burtoni
ENSDNOG00000008665UPF3B10089.855ENSHGLG00000019582-10089.855Heterocephalus_glaber_female
ENSDNOG00000008665UPF3B8682.324ENSHGLG00000011189-9582.082Heterocephalus_glaber_female
ENSDNOG00000008665UPF3B8682.082ENSHGLG00100001889-9581.356Heterocephalus_glaber_male
ENSDNOG00000008665UPF3B10086.749ENSHGLG00100002042-10087.164Heterocephalus_glaber_male
ENSDNOG00000008665UPF3B9355.628ENSHCOG00000017004upf3b9355.411Hippocampus_comes
ENSDNOG00000008665UPF3B10055.354ENSIPUG00000019249upf3b10055.960Ictalurus_punctatus
ENSDNOG00000008665UPF3B10090.269ENSSTOG00000001101UPF3B10090.269Ictidomys_tridecemlineatus
ENSDNOG00000008665UPF3B10085.155ENSJJAG00000000053Upf3b10085.361Jaculus_jaculus
ENSDNOG00000008665UPF3B9854.227ENSKMAG00000020300upf3b9655.158Kryptolebias_marmoratus
ENSDNOG00000008665UPF3B6162.667ENSLBEG00000028689upf3b5962.667Labrus_bergylta
ENSDNOG00000008665UPF3B9058.222ENSLACG00000008691UPF3B10055.361Latimeria_chalumnae
ENSDNOG00000008665UPF3B9050.998ENSLOCG00000002665upf3a9146.785Lepisosteus_oculatus
ENSDNOG00000008665UPF3B6165.552ENSLOCG00000015238upf3b9358.986Lepisosteus_oculatus
ENSDNOG00000008665UPF3B10090.890ENSLAFG00000001267UPF3B10090.890Loxodonta_africana
ENSDNOG00000008665UPF3B8943.218ENSLAFG00000023358UPF3A9942.857Loxodonta_africana
ENSDNOG00000008665UPF3B10094.203ENSMFAG00000045414UPF3B10096.654Macaca_fascicularis
ENSDNOG00000008665UPF3B10094.203ENSMMUG00000020222UPF3B10096.654Macaca_mulatta
ENSDNOG00000008665UPF3B8447.482ENSMMUG00000007449UPF3A8348.058Macaca_mulatta
ENSDNOG00000008665UPF3B10094.203ENSMNEG00000039794UPF3B10096.654Macaca_nemestrina
ENSDNOG00000008665UPF3B8348.434ENSMNEG00000036402UPF3A7947.952Macaca_nemestrina
ENSDNOG00000008665UPF3B8346.988ENSMLEG00000014726UPF3A8943.796Mandrillus_leucophaeus
ENSDNOG00000008665UPF3B10094.410ENSMLEG00000010999UPF3B10096.654Mandrillus_leucophaeus
ENSDNOG00000008665UPF3B9656.394ENSMZEG00005007871upf3b9756.604Maylandia_zebra
ENSDNOG00000008665UPF3B8648.492ENSMGAG00000014837UPF3A9843.256Meleagris_gallopavo
ENSDNOG00000008665UPF3B8165.602ENSMGAG00000007728UPF3B9968.080Meleagris_gallopavo
ENSDNOG00000008665UPF3B10082.680ENSMAUG00000008705Upf3b10082.887Mesocricetus_auratus
ENSDNOG00000008665UPF3B7095.926ENSMICG00000001743UPF3B10095.926Microcebus_murinus
ENSDNOG00000008665UPF3B10084.330ENSMOCG00000017893Upf3b10084.536Microtus_ochrogaster
ENSDNOG00000008665UPF3B9353.796ENSMMOG00000004183upf3b9454.762Mola_mola
ENSDNOG00000008665UPF3B8972.831ENSMODG00000010232UPF3B9972.603Monodelphis_domestica
ENSDNOG00000008665UPF3B8850.225ENSMODG00000003159UPF3A9649.776Monodelphis_domestica
ENSDNOG00000008665UPF3B6065.424ENSMALG00000008042upf3b9457.569Monopterus_albus
ENSDNOG00000008665UPF3B10081.031MGP_CAROLIEiJ_G0032999Upf3b10081.237Mus_caroli
ENSDNOG00000008665UPF3B10081.649ENSMUSG00000036572Upf3b10081.856Mus_musculus
ENSDNOG00000008665UPF3B10080.825MGP_PahariEiJ_G0031543Upf3b10081.031Mus_pahari
ENSDNOG00000008665UPF3B10081.649MGP_SPRETEiJ_G0034152Upf3b10081.856Mus_spretus
ENSDNOG00000008665UPF3B9043.792ENSMPUG00000009139UPF3A8442.237Mustela_putorius_furo
ENSDNOG00000008665UPF3B9892.161ENSMPUG00000001531UPF3B10092.161Mustela_putorius_furo
ENSDNOG00000008665UPF3B10091.097ENSMLUG00000010821UPF3B10091.097Myotis_lucifugus
ENSDNOG00000008665UPF3B10080.206ENSNGAG00000008231Upf3b10081.237Nannospalax_galili
ENSDNOG00000008665UPF3B9794.255ENSNLEG00000014897UPF3B10094.203Nomascus_leucogenys
ENSDNOG00000008665UPF3B8548.104ENSNLEG00000007563UPF3A8842.325Nomascus_leucogenys
ENSDNOG00000008665UPF3B6483.871ENSMEUG00000015615UPF3B8183.974Notamacropus_eugenii
ENSDNOG00000008665UPF3B10083.437ENSODEG00000002186-10083.230Octodon_degus
ENSDNOG00000008665UPF3B10056.653ENSONIG00000002536upf3b10054.234Oreochromis_niloticus
ENSDNOG00000008665UPF3B8964.920ENSOANG00000002594-9964.920Ornithorhynchus_anatinus
ENSDNOG00000008665UPF3B10093.789ENSOCUG00000010213UPF3B10093.789Oryctolagus_cuniculus
ENSDNOG00000008665UPF3B9655.324ENSORLG00000001026upf3b9654.737Oryzias_latipes
ENSDNOG00000008665UPF3B9654.697ENSORLG00020003758upf3b9654.088Oryzias_latipes_hni
ENSDNOG00000008665UPF3B9655.115ENSORLG00015012954upf3b9654.526Oryzias_latipes_hsok
ENSDNOG00000008665UPF3B8654.801ENSOMEG00000014736upf3b9654.737Oryzias_melastigma
ENSDNOG00000008665UPF3B10091.097ENSOGAG00000004643-10091.097Otolemur_garnettii
ENSDNOG00000008665UPF3B9877.801ENSOGAG00000033003-10078.224Otolemur_garnettii
ENSDNOG00000008665UPF3B9066.514ENSOARG00000007869-9963.387Ovis_aries
ENSDNOG00000008665UPF3B10094.033ENSOARG00000016051-10094.033Ovis_aries
ENSDNOG00000008665UPF3B10094.617ENSPPAG00000040390UPF3B10096.654Pan_paniscus
ENSDNOG00000008665UPF3B8548.341ENSPPAG00000042267UPF3A8646.771Pan_paniscus
ENSDNOG00000008665UPF3B9446.234ENSPPRG00000025062UPF3A9142.553Panthera_pardus
ENSDNOG00000008665UPF3B10094.824ENSPPRG00000023536UPF3B10094.824Panthera_pardus
ENSDNOG00000008665UPF3B10090.342ENSPTIG00000015264UPF3B10091.952Panthera_tigris_altaica
ENSDNOG00000008665UPF3B10094.617ENSPTRG00000022228UPF3B10096.654Pan_troglodytes
ENSDNOG00000008665UPF3B8549.052ENSPTRG00000006073UPF3A8646.771Pan_troglodytes
ENSDNOG00000008665UPF3B8339.903ENSPTRG00000051640-8636.855Pan_troglodytes
ENSDNOG00000008665UPF3B10094.410ENSPANG00000000900UPF3B10096.654Papio_anubis
ENSDNOG00000008665UPF3B9046.993ENSPANG00000004346UPF3A8646.548Papio_anubis
ENSDNOG00000008665UPF3B9154.725ENSPKIG00000019226upf3b9364.557Paramormyrops_kingsleyae
ENSDNOG00000008665UPF3B5770.357ENSPSIG00000005833UPF3B9072.388Pelodiscus_sinensis
ENSDNOG00000008665UPF3B8451.501ENSPSIG00000007468UPF3A9750.114Pelodiscus_sinensis
ENSDNOG00000008665UPF3B5667.399ENSPMGG00000016067upf3b9467.153Periophthalmus_magnuspinnatus
ENSDNOG00000008665UPF3B10085.802ENSPEMG00000012352Upf3b10086.008Peromyscus_maniculatus_bairdii
ENSDNOG00000008665UPF3B9368.860ENSPCIG00000028914UPF3B9666.314Phascolarctos_cinereus
ENSDNOG00000008665UPF3B7257.205ENSPCIG00000019590-7364.407Phascolarctos_cinereus
ENSDNOG00000008665UPF3B6468.354ENSPLAG00000011960upf3a8350.237Poecilia_latipinna
ENSDNOG00000008665UPF3B9654.176ENSPLAG00000019922upf3b9455.603Poecilia_latipinna
ENSDNOG00000008665UPF3B9654.176ENSPLAG00000005105upf3b9455.603Poecilia_latipinna
ENSDNOG00000008665UPF3B9654.390ENSPMEG00000023532upf3b9456.114Poecilia_mexicana
ENSDNOG00000008665UPF3B8548.104ENSPPYG00000005536UPF3A8646.993Pongo_abelii
ENSDNOG00000008665UPF3B6996.809ENSPPYG00000020675-10096.809Pongo_abelii
ENSDNOG00000008665UPF3B10093.168ENSPCAG00000009464UPF3B10093.168Procavia_capensis
ENSDNOG00000008665UPF3B10094.008ENSPCOG00000021960UPF3B10095.926Propithecus_coquereli
ENSDNOG00000008665UPF3B10080.952ENSPVAG00000014075UPF3B10080.952Pteropus_vampyrus
ENSDNOG00000008665UPF3B8545.843ENSPVAG00000005656UPF3A8639.035Pteropus_vampyrus
ENSDNOG00000008665UPF3B9655.839ENSPNYG00000009846upf3b9656.568Pundamilia_nyererei
ENSDNOG00000008665UPF3B9854.898ENSPNAG00000021528upf3b9954.898Pygocentrus_nattereri
ENSDNOG00000008665UPF3B10084.948ENSRNOG00000039994Upf3b10085.155Rattus_norvegicus
ENSDNOG00000008665UPF3B8347.585ENSRBIG00000034007UPF3A9146.154Rhinopithecus_bieti
ENSDNOG00000008665UPF3B8292.695ENSRBIG00000037219UPF3B10092.695Rhinopithecus_bieti
ENSDNOG00000008665UPF3B8348.309ENSRROG00000012212UPF3A8048.775Rhinopithecus_roxellana
ENSDNOG00000008665UPF3B10094.617ENSRROG00000041031UPF3B10096.654Rhinopithecus_roxellana
ENSDNOG00000008665UPF3B10093.996ENSSBOG00000019740UPF3B10096.283Saimiri_boliviensis_boliviensis
ENSDNOG00000008665UPF3B7644.211ENSSBOG00000029989UPF3A8535.955Saimiri_boliviensis_boliviensis
ENSDNOG00000008665UPF3B8872.854ENSSHAG00000008634UPF3B9968.247Sarcophilus_harrisii
ENSDNOG00000008665UPF3B8849.887ENSSHAG00000009895UPF3A9849.438Sarcophilus_harrisii
ENSDNOG00000008665UPF3B10054.694ENSSFOG00015005614upf3b10058.248Scleropages_formosus
ENSDNOG00000008665UPF3B9354.292ENSSMAG00000012913upf3b8468.382Scophthalmus_maximus
ENSDNOG00000008665UPF3B9650.316ENSSDUG00000005682upf3b9751.261Seriola_dumerili
ENSDNOG00000008665UPF3B6071.166ENSSDUG00000009680upf3a5776.344Seriola_dumerili
ENSDNOG00000008665UPF3B9653.684ENSSLDG00000003130upf3b9751.471Seriola_lalandi_dorsalis
ENSDNOG00000008665UPF3B8237.376ENSSARG00000007262UPF3A9234.889Sorex_araneus
ENSDNOG00000008665UPF3B8985.484ENSSARG00000004147UPF3B10085.484Sorex_araneus
ENSDNOG00000008665UPF3B9963.273ENSSPUG00000013082UPF3B9963.179Sphenodon_punctatus
ENSDNOG00000008665UPF3B9655.063ENSSPAG00000009989upf3b9655.579Stegastes_partitus
ENSDNOG00000008665UPF3B10091.511ENSSSCG00000012617UPF3B10091.511Sus_scrofa
ENSDNOG00000008665UPF3B8969.318ENSTGUG00000003413UPF3B9969.318Taeniopygia_guttata
ENSDNOG00000008665UPF3B8452.392ENSTGUG00000009493UPF3A9952.133Taeniopygia_guttata
ENSDNOG00000008665UPF3B8756.308ENSTRUG00000010645upf3b9854.393Takifugu_rubripes
ENSDNOG00000008665UPF3B8754.225ENSTNIG00000015763upf3b9052.693Tetraodon_nigroviridis
ENSDNOG00000008665UPF3B10078.882ENSTBEG00000003229UPF3B10078.882Tupaia_belangeri
ENSDNOG00000008665UPF3B10088.866ENSUAMG00000024565UPF3B10092.920Ursus_americanus
ENSDNOG00000008665UPF3B9383.648ENSUMAG00000002150UPF3B9983.019Ursus_maritimus
ENSDNOG00000008665UPF3B8594.878ENSVPAG00000009971UPF3B10094.878Vicugna_pacos
ENSDNOG00000008665UPF3B8943.218ENSVPAG00000003525UPF3A10043.607Vicugna_pacos
ENSDNOG00000008665UPF3B10089.441ENSVVUG00000011594UPF3B10094.017Vulpes_vulpes
ENSDNOG00000008665UPF3B8445.673ENSXETG00000002572upf3a9045.060Xenopus_tropicalis
ENSDNOG00000008665UPF3B8555.107ENSXETG00000007440upf3b7876.111Xenopus_tropicalis
ENSDNOG00000008665UPF3B9352.747ENSXCOG00000016586upf3b9766.351Xiphophorus_couchianus
ENSDNOG00000008665UPF3B9454.367ENSXMAG00000013680upf3b9454.585Xiphophorus_maculatus

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