EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSDNOG00000008940 (Gene tree)
Gene ID
101426833
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Dasypus_novemcinctus
Status
putative
Strand
Plus strand
Length
38000 bases
Position
chrJH567436.1:1847507-1885506
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDNOP00000006935CPSF73-100_CPF11718.86.1e-5511
ENSDNOP00000006935Beta-CaspPF10996.84.9e-3411
ENSDNOP00000006935Lactamase_BPF00753.272.1e-1811
ENSDNOP00000006935RMMBLPF07521.121.6e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDNOT00000008942CPSF3-2012157-ENSDNOP00000006935718 (aa)-UPI0003CC0E07
Gene Model
Click here to download ENSDNOG00000008940's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000008940's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDNOG00000008940CPSF36438.730ENSDNOG00000025863INTS118440.596
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDNOG00000008940CPSF39597.664ENSG00000119203CPSF310097.794Homo_sapiens
ENSDNOG00000008940CPSF37095.400ENSAPOG00000012241CPSF39095.382Acanthochromis_polyacanthus
ENSDNOG00000008940CPSF39584.435ENSAPOG00000022087cpsf39884.435Acanthochromis_polyacanthus
ENSDNOG00000008940CPSF39597.956ENSAMEG00000008493CPSF310097.956Ailuropoda_melanoleuca
ENSDNOG00000008940CPSF38885.578ENSACIG00000023663CPSF39985.578Amphilophus_citrinellus
ENSDNOG00000008940CPSF38781.876ENSACIG00000009846cpsf39981.876Amphilophus_citrinellus
ENSDNOG00000008940CPSF39587.078ENSAOCG00000010077CPSF39887.078Amphiprion_ocellaris
ENSDNOG00000008940CPSF39584.581ENSAOCG00000022056cpsf39489.831Amphiprion_ocellaris
ENSDNOG00000008940CPSF39587.078ENSAPEG00000021167CPSF39887.078Amphiprion_percula
ENSDNOG00000008940CPSF39584.728ENSAPEG00000019526cpsf39885.692Amphiprion_percula
ENSDNOG00000008940CPSF39584.581ENSATEG00000003959cpsf39884.581Anabas_testudineus
ENSDNOG00000008940CPSF39582.526ENSATEG00000014525CPSF39882.526Anabas_testudineus
ENSDNOG00000008940CPSF39493.908ENSAPLG00000006941CPSF39893.908Anas_platyrhynchos
ENSDNOG00000008940CPSF38891.195ENSACAG00000001759CPSF39991.195Anolis_carolinensis
ENSDNOG00000008940CPSF39591.533ENSANAG00000031254CPSF310091.533Aotus_nancymaae
ENSDNOG00000008940CPSF39384.685ENSACLG00000014484cpsf39984.685Astatotilapia_calliptera
ENSDNOG00000008940CPSF38885.578ENSACLG00000018846CPSF39985.578Astatotilapia_calliptera
ENSDNOG00000008940CPSF39587.078ENSAMXG00000004786cpsf39887.078Astyanax_mexicanus
ENSDNOG00000008940CPSF39598.102ENSBTAG00000019735CPSF310098.102Bos_taurus
ENSDNOG00000008940CPSF38658.491WBGene00013460cpsf-38958.491Caenorhabditis_elegans
ENSDNOG00000008940CPSF39597.372ENSCJAG00000006276CPSF310097.372Callithrix_jacchus
ENSDNOG00000008940CPSF39995.531ENSCAFG00000003375CPSF39995.531Canis_familiaris
ENSDNOG00000008940CPSF38698.226ENSCAFG00020026799CPSF310098.226Canis_lupus_dingo
ENSDNOG00000008940CPSF39598.102ENSCHIG00000013973CPSF310098.102Capra_hircus
ENSDNOG00000008940CPSF39597.664ENSTSYG00000002967CPSF310097.664Carlito_syrichta
ENSDNOG00000008940CPSF39396.557ENSCAPG00000013851CPSF310096.557Cavia_aperea
ENSDNOG00000008940CPSF39596.496ENSCPOG00000011299CPSF310096.496Cavia_porcellus
ENSDNOG00000008940CPSF39597.518ENSCCAG00000036730CPSF310097.518Cebus_capucinus
ENSDNOG00000008940CPSF39595.044ENSCATG00000014770CPSF39998.282Cercocebus_atys
ENSDNOG00000008940CPSF39596.204ENSCLAG00000002727CPSF310096.204Chinchilla_lanigera
ENSDNOG00000008940CPSF39589.927ENSCSAG00000007125CPSF310089.927Chlorocebus_sabaeus
ENSDNOG00000008940CPSF368100.000ENSCHOG00000000180CPSF370100.000Choloepus_hoffmanni
ENSDNOG00000008940CPSF39594.583ENSCPBG00000014074CPSF39994.583Chrysemys_picta_bellii
ENSDNOG00000008940CPSF39566.425ENSCING00000007214-9866.425Ciona_intestinalis
ENSDNOG00000008940CPSF39584.180ENSCANG00000034435CPSF310084.180Colobus_angolensis_palliatus
ENSDNOG00000008940CPSF39597.226ENSCGRG00001013134Cpsf310097.226Cricetulus_griseus_chok1gshd
ENSDNOG00000008940CPSF39597.226ENSCGRG00000018319Cpsf310097.226Cricetulus_griseus_crigri
ENSDNOG00000008940CPSF39585.924ENSCSEG00000002021CPSF39985.648Cynoglossus_semilaevis
ENSDNOG00000008940CPSF39587.518ENSCVAG00000015067CPSF39887.518Cyprinodon_variegatus
ENSDNOG00000008940CPSF39587.665ENSDARG00000027649cpsf39887.665Danio_rerio
ENSDNOG00000008940CPSF39197.393ENSDORG00000014263Cpsf310097.393Dipodomys_ordii
ENSDNOG00000008940CPSF39665.942FBgn0261065Cpsf739965.942Drosophila_melanogaster
ENSDNOG00000008940CPSF39184.049ENSETEG00000003893CPSF310084.049Echinops_telfairi
ENSDNOG00000008940CPSF39577.396ENSEBUG00000009018cpsf39877.539Eptatretus_burgeri
ENSDNOG00000008940CPSF39597.956ENSEASG00005003970CPSF310097.956Equus_asinus_asinus
ENSDNOG00000008940CPSF39597.956ENSECAG00000019911CPSF310097.956Equus_caballus
ENSDNOG00000008940CPSF39583.212ENSEEUG00000015422CPSF310083.212Erinaceus_europaeus
ENSDNOG00000008940CPSF39587.078ENSELUG00000013775cpsf39887.078Esox_lucius
ENSDNOG00000008940CPSF39598.102ENSFCAG00000007852CPSF310098.148Felis_catus
ENSDNOG00000008940CPSF39093.827ENSFALG00000006572CPSF310093.827Ficedula_albicollis
ENSDNOG00000008940CPSF39595.900ENSFDAG00000006317CPSF39995.900Fukomys_damarensis
ENSDNOG00000008940CPSF39583.847ENSFHEG00000014774cpsf39883.847Fundulus_heteroclitus
ENSDNOG00000008940CPSF35768.127ENSFHEG00000012186CPSF39968.127Fundulus_heteroclitus
ENSDNOG00000008940CPSF39585.777ENSGMOG00000003157cpsf39985.777Gadus_morhua
ENSDNOG00000008940CPSF39593.842ENSGALG00000016424CPSF39993.842Gallus_gallus
ENSDNOG00000008940CPSF39587.353ENSGAFG00000008016CPSF39887.353Gambusia_affinis
ENSDNOG00000008940CPSF38780.952ENSGAFG00000019449cpsf39980.952Gambusia_affinis
ENSDNOG00000008940CPSF36592.735ENSGAGG00000025583CPSF39392.735Gopherus_agassizii
ENSDNOG00000008940CPSF39595.429ENSGGOG00000001757CPSF310097.799Gorilla_gorilla
ENSDNOG00000008940CPSF35780.788ENSHBUG00000014332CPSF39980.788Haplochromis_burtoni
ENSDNOG00000008940CPSF39584.751ENSHBUG00000001188cpsf39984.751Haplochromis_burtoni
ENSDNOG00000008940CPSF39595.328ENSHGLG00000000666CPSF39995.328Heterocephalus_glaber_female
ENSDNOG00000008940CPSF39595.328ENSHGLG00100007765CPSF39995.328Heterocephalus_glaber_male
ENSDNOG00000008940CPSF39585.463ENSHCOG00000015957CPSF39785.463Hippocampus_comes
ENSDNOG00000008940CPSF39583.895ENSHCOG00000007251cpsf39983.895Hippocampus_comes
ENSDNOG00000008940CPSF39585.756ENSIPUG00000023488cpsf39885.756Ictalurus_punctatus
ENSDNOG00000008940CPSF39597.372ENSSTOG00000004476CPSF310097.372Ictidomys_tridecemlineatus
ENSDNOG00000008940CPSF39596.496ENSJJAG00000023415Cpsf310096.496Jaculus_jaculus
ENSDNOG00000008940CPSF39583.554ENSKMAG00000002806cpsf39883.554Kryptolebias_marmoratus
ENSDNOG00000008940CPSF39586.784ENSKMAG00000007317CPSF39886.784Kryptolebias_marmoratus
ENSDNOG00000008940CPSF35278.877ENSLBEG00000015018-9978.877Labrus_bergylta
ENSDNOG00000008940CPSF39088.136ENSLBEG00000013492CPSF39888.136Labrus_bergylta
ENSDNOG00000008940CPSF39578.299ENSLBEG00000020569cpsf39478.299Labrus_bergylta
ENSDNOG00000008940CPSF39583.382ENSLACG00000008308CPSF39883.382Latimeria_chalumnae
ENSDNOG00000008940CPSF39587.977ENSLOCG00000016823cpsf39887.977Lepisosteus_oculatus
ENSDNOG00000008940CPSF39596.623ENSLAFG00000009467CPSF310096.623Loxodonta_africana
ENSDNOG00000008940CPSF39597.664ENSMFAG00000001339CPSF310097.664Macaca_fascicularis
ENSDNOG00000008940CPSF39097.685ENSMMUG00000018038CPSF310097.685Macaca_mulatta
ENSDNOG00000008940CPSF39584.964ENSMNEG00000039447CPSF310084.964Macaca_nemestrina
ENSDNOG00000008940CPSF39597.810ENSMLEG00000026825CPSF310097.810Mandrillus_leucophaeus
ENSDNOG00000008940CPSF38884.360ENSMAMG00000008835CPSF39984.360Mastacembelus_armatus
ENSDNOG00000008940CPSF39584.853ENSMAMG00000003076cpsf39884.853Mastacembelus_armatus
ENSDNOG00000008940CPSF39587.812ENSMZEG00005006258CPSF39887.812Maylandia_zebra
ENSDNOG00000008940CPSF39584.751ENSMZEG00005014358cpsf39984.751Maylandia_zebra
ENSDNOG00000008940CPSF39393.563ENSMGAG00000013995CPSF310093.563Meleagris_gallopavo
ENSDNOG00000008940CPSF35395.225ENSMAUG00000000166Cpsf310095.225Mesocricetus_auratus
ENSDNOG00000008940CPSF39592.117ENSMICG00000002363CPSF310092.117Microcebus_murinus
ENSDNOG00000008940CPSF39592.555ENSMOCG00000020067Cpsf310092.555Microtus_ochrogaster
ENSDNOG00000008940CPSF37671.472ENSMMOG00000011923CPSF38477.500Mola_mola
ENSDNOG00000008940CPSF39081.269ENSMMOG00000018212CPSF39881.269Mola_mola
ENSDNOG00000008940CPSF39594.653ENSMODG00000014703CPSF310094.653Monodelphis_domestica
ENSDNOG00000008940CPSF39585.191ENSMALG00000016416cpsf39985.191Monopterus_albus
ENSDNOG00000008940CPSF38882.371ENSMALG00000011474CPSF39982.371Monopterus_albus
ENSDNOG00000008940CPSF39596.934MGP_CAROLIEiJ_G0017640Cpsf310096.934Mus_caroli
ENSDNOG00000008940CPSF39596.934ENSMUSG00000054309Cpsf310096.934Mus_musculus
ENSDNOG00000008940CPSF39596.788MGP_PahariEiJ_G0029397Cpsf310096.788Mus_pahari
ENSDNOG00000008940CPSF39596.934MGP_SPRETEiJ_G0018481Cpsf310096.934Mus_spretus
ENSDNOG00000008940CPSF39597.226ENSMPUG00000013213CPSF310097.226Mustela_putorius_furo
ENSDNOG00000008940CPSF39596.793ENSMLUG00000010636CPSF310096.793Myotis_lucifugus
ENSDNOG00000008940CPSF39597.080ENSNGAG00000019836Cpsf310097.080Nannospalax_galili
ENSDNOG00000008940CPSF38885.578ENSNBRG00000010525CPSF39985.578Neolamprologus_brichardi
ENSDNOG00000008940CPSF39584.311ENSNBRG00000004770cpsf39984.311Neolamprologus_brichardi
ENSDNOG00000008940CPSF39597.664ENSNLEG00000013359CPSF310097.685Nomascus_leucogenys
ENSDNOG00000008940CPSF39564.234ENSMEUG00000013117-10064.234Notamacropus_eugenii
ENSDNOG00000008940CPSF39588.321ENSOPRG00000008902CPSF310088.321Ochotona_princeps
ENSDNOG00000008940CPSF39595.766ENSODEG00000003129CPSF310095.766Octodon_degus
ENSDNOG00000008940CPSF39585.044ENSONIG00000018812cpsf39985.044Oreochromis_niloticus
ENSDNOG00000008940CPSF37995.575ENSOANG00000008577CPSF310095.575Ornithorhynchus_anatinus
ENSDNOG00000008940CPSF39597.518ENSOCUG00000003728CPSF310097.518Oryctolagus_cuniculus
ENSDNOG00000008940CPSF39582.551ENSORLG00000018854cpsf39982.551Oryzias_latipes
ENSDNOG00000008940CPSF39582.405ENSORLG00020013331cpsf39982.405Oryzias_latipes_hni
ENSDNOG00000008940CPSF39582.551ENSORLG00015011017cpsf39982.551Oryzias_latipes_hsok
ENSDNOG00000008940CPSF39582.845ENSOMEG00000010647cpsf39482.845Oryzias_melastigma
ENSDNOG00000008940CPSF39588.029ENSOGAG00000001680CPSF310088.029Otolemur_garnettii
ENSDNOG00000008940CPSF39598.102ENSOARG00000015073CPSF310098.102Ovis_aries
ENSDNOG00000008940CPSF39597.810ENSPPAG00000042457CPSF310097.810Pan_paniscus
ENSDNOG00000008940CPSF39597.810ENSPPRG00000016790CPSF310097.840Panthera_pardus
ENSDNOG00000008940CPSF39597.944ENSPTIG00000003920CPSF310097.799Panthera_tigris_altaica
ENSDNOG00000008940CPSF39597.810ENSPTRG00000011638CPSF310097.810Pan_troglodytes
ENSDNOG00000008940CPSF39597.518ENSPANG00000016798CPSF310097.518Papio_anubis
ENSDNOG00000008940CPSF39588.399ENSPKIG00000023646cpsf39988.080Paramormyrops_kingsleyae
ENSDNOG00000008940CPSF39592.690ENSPSIG00000016144CPSF310092.690Pelodiscus_sinensis
ENSDNOG00000008940CPSF35778.079ENSPMGG00000015311CPSF39978.079Periophthalmus_magnuspinnatus
ENSDNOG00000008940CPSF37983.972ENSPMGG00000006141-9983.972Periophthalmus_magnuspinnatus
ENSDNOG00000008940CPSF39596.496ENSPEMG00000017668Cpsf310096.496Peromyscus_maniculatus_bairdii
ENSDNOG00000008940CPSF37589.033ENSPMAG00000004841cpsf39989.033Petromyzon_marinus
ENSDNOG00000008940CPSF39396.257ENSPCIG00000009823CPSF39896.478Phascolarctos_cinereus
ENSDNOG00000008940CPSF39587.059ENSPFOG00000010418-9887.059Poecilia_formosa
ENSDNOG00000008940CPSF39583.748ENSPFOG00000015922cpsf39983.748Poecilia_formosa
ENSDNOG00000008940CPSF39583.748ENSPLAG00000000882cpsf39983.748Poecilia_latipinna
ENSDNOG00000008940CPSF35680.247ENSPLAG00000021300-9980.247Poecilia_latipinna
ENSDNOG00000008940CPSF39583.895ENSPMEG00000018309cpsf39983.895Poecilia_mexicana
ENSDNOG00000008940CPSF38781.429ENSPREG00000014875cpsf39981.429Poecilia_reticulata
ENSDNOG00000008940CPSF39582.059ENSPREG00000004482CPSF39882.059Poecilia_reticulata
ENSDNOG00000008940CPSF39593.285ENSPPYG00000012666CPSF310093.285Pongo_abelii
ENSDNOG00000008940CPSF39163.650ENSPCAG00000015042CPSF310063.650Procavia_capensis
ENSDNOG00000008940CPSF38490.780ENSPCOG00000023016CPSF39890.780Propithecus_coquereli
ENSDNOG00000008940CPSF39597.804ENSPVAG00000005324CPSF39997.804Pteropus_vampyrus
ENSDNOG00000008940CPSF37590.074ENSPNYG00000021047CPSF39190.074Pundamilia_nyererei
ENSDNOG00000008940CPSF39584.751ENSPNYG00000004405cpsf39984.751Pundamilia_nyererei
ENSDNOG00000008940CPSF39586.490ENSPNAG00000023060cpsf39886.490Pygocentrus_nattereri
ENSDNOG00000008940CPSF39596.925ENSRNOG00000052418Cpsf39996.925Rattus_norvegicus
ENSDNOG00000008940CPSF39591.825ENSRBIG00000041615CPSF39993.210Rhinopithecus_bieti
ENSDNOG00000008940CPSF39597.810ENSRROG00000033792CPSF310097.810Rhinopithecus_roxellana
ENSDNOG00000008940CPSF38940.885YLR277CYSH19540.885Saccharomyces_cerevisiae
ENSDNOG00000008940CPSF39591.606ENSSBOG00000027263CPSF310091.606Saimiri_boliviensis_boliviensis
ENSDNOG00000008940CPSF39596.350ENSSHAG00000007024CPSF310096.350Sarcophilus_harrisii
ENSDNOG00000008940CPSF39588.270ENSSFOG00015002108cpsf39988.270Scleropages_formosus
ENSDNOG00000008940CPSF39186.615ENSSMAG00000020534CPSF39586.615Scophthalmus_maximus
ENSDNOG00000008940CPSF39587.372ENSSDUG00000018498CPSF39887.372Seriola_dumerili
ENSDNOG00000008940CPSF39584.897ENSSDUG00000002828cpsf39684.897Seriola_dumerili
ENSDNOG00000008940CPSF39584.897ENSSLDG00000008469cpsf39684.897Seriola_lalandi_dorsalis
ENSDNOG00000008940CPSF39587.372ENSSLDG00000005234CPSF39887.372Seriola_lalandi_dorsalis
ENSDNOG00000008940CPSF39580.438ENSSARG00000005186CPSF310080.438Sorex_araneus
ENSDNOG00000008940CPSF39391.369ENSSPUG00000015525CPSF39791.369Sphenodon_punctatus
ENSDNOG00000008940CPSF39587.078ENSSPAG00000002906CPSF39887.078Stegastes_partitus
ENSDNOG00000008940CPSF39584.728ENSSPAG00000018579cpsf39884.728Stegastes_partitus
ENSDNOG00000008940CPSF39597.807ENSSSCG00000020799CPSF39997.807Sus_scrofa
ENSDNOG00000008940CPSF39593.713ENSTGUG00000013016CPSF39993.713Taeniopygia_guttata
ENSDNOG00000008940CPSF35672.304ENSTRUG00000013905CPSF39972.304Takifugu_rubripes
ENSDNOG00000008940CPSF39584.141ENSTRUG00000007030cpsf39784.141Takifugu_rubripes
ENSDNOG00000008940CPSF38193.425ENSTBEG00000002707CPSF38593.425Tupaia_belangeri
ENSDNOG00000008940CPSF38397.849ENSTTRG00000000861CPSF38797.849Tursiops_truncatus
ENSDNOG00000008940CPSF39298.024ENSUAMG00000007535CPSF39498.024Ursus_americanus
ENSDNOG00000008940CPSF39097.994ENSUMAG00000003676CPSF310097.994Ursus_maritimus
ENSDNOG00000008940CPSF38894.803ENSVPAG00000008041CPSF310094.803Vicugna_pacos
ENSDNOG00000008940CPSF39597.956ENSVVUG00000002194CPSF310097.956Vulpes_vulpes
ENSDNOG00000008940CPSF39588.563ENSXETG00000008263cpsf39888.563Xenopus_tropicalis
ENSDNOG00000008940CPSF35278.495ENSXCOG00000000957-8778.495Xiphophorus_couchianus
ENSDNOG00000008940CPSF39583.602ENSXCOG00000019695cpsf39983.602Xiphophorus_couchianus
ENSDNOG00000008940CPSF39583.748ENSXMAG00000009784cpsf39983.748Xiphophorus_maculatus
ENSDNOG00000008940CPSF39587.059ENSXMAG00000027291CPSF39887.059Xiphophorus_maculatus

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