EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000009957 (Gene tree)
Gene ID: 101436459
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 17429 bases
Position: chrJH568787.1:148334-165762
Accession: 101436459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000007714	PPR	PF01535.20	9.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000009958	-	2305	XM_004462660	ENSDNOP00000007714	707 (aa)	XP_004462717	UPI0003CC0829

Gene Model

Click here to download ENSDNOG00000009957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000009957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000009957	-	100	73.455	ENSG00000106246	PTCD1	100	73.174	Homo_sapiens
ENSDNOG00000009957	-	100	73.455	ENSG00000248919	ATP5MF-PTCD1	93	73.174	Homo_sapiens
ENSDNOG00000009957	-	85	45.280	ENSAPOG00000010679	ptcd1	85	47.090	Acanthochromis_polyacanthus
ENSDNOG00000009957	-	100	80.000	ENSAMEG00000006224	-	93	78.561	Ailuropoda_melanoleuca
ENSDNOG00000009957	-	86	48.697	ENSACIG00000017861	ptcd1	86	48.689	Amphilophus_citrinellus
ENSDNOG00000009957	-	79	47.887	ENSAOCG00000022617	ptcd1	82	47.788	Amphiprion_ocellaris
ENSDNOG00000009957	-	83	48.576	ENSAOCG00000020741	-	81	48.485	Amphiprion_ocellaris
ENSDNOG00000009957	-	83	48.409	ENSAPEG00000022632	ptcd1	81	48.409	Amphiprion_percula
ENSDNOG00000009957	-	92	47.167	ENSATEG00000007016	ptcd1	81	49.660	Anabas_testudineus
ENSDNOG00000009957	-	84	60.804	ENSAPLG00000006862	-	95	60.000	Anas_platyrhynchos
ENSDNOG00000009957	-	99	54.357	ENSACAG00000012871	-	93	53.760	Anolis_carolinensis
ENSDNOG00000009957	-	98	74.676	ENSANAG00000035790	-	100	73.449	Aotus_nancymaae
ENSDNOG00000009957	-	85	48.768	ENSACLG00000002824	ptcd1	81	49.069	Astatotilapia_calliptera
ENSDNOG00000009957	-	86	48.504	ENSAMXG00000037292	ptcd1	87	47.950	Astyanax_mexicanus
ENSDNOG00000009957	-	100	78.169	ENSBTAG00000020440	-	87	78.169	Bos_taurus
ENSDNOG00000009957	-	100	74.684	ENSCJAG00000015815	-	100	73.625	Callithrix_jacchus
ENSDNOG00000009957	-	100	78.732	ENSCAFG00000015055	-	93	77.574	Canis_familiaris
ENSDNOG00000009957	-	100	78.732	ENSCAFG00020014480	-	93	77.574	Canis_lupus_dingo
ENSDNOG00000009957	-	100	77.042	ENSCHIG00000027000	-	99	77.042	Capra_hircus
ENSDNOG00000009957	-	100	77.324	ENSTSYG00000029495	-	100	76.761	Carlito_syrichta
ENSDNOG00000009957	-	93	74.433	ENSCAPG00000014660	-	100	74.433	Cavia_aperea
ENSDNOG00000009957	-	100	74.225	ENSCPOG00000001780	-	100	74.225	Cavia_porcellus
ENSDNOG00000009957	-	100	73.315	ENSCCAG00000034025	-	100	72.958	Cebus_capucinus
ENSDNOG00000009957	-	99	73.371	ENSCATG00000040859	-	99	73.371	Cercocebus_atys
ENSDNOG00000009957	-	98	75.897	ENSCLAG00000006354	-	100	73.944	Chinchilla_lanigera
ENSDNOG00000009957	-	92	73.047	ENSCSAG00000017794	-	95	72.435	Chlorocebus_sabaeus
ENSDNOG00000009957	-	98	54.398	ENSCPBG00000020866	-	86	58.540	Chrysemys_picta_bellii
ENSDNOG00000009957	-	82	30.486	ENSCING00000007717	-	97	30.471	Ciona_intestinalis
ENSDNOG00000009957	-	100	73.277	ENSCANG00000023441	-	100	73.277	Colobus_angolensis_palliatus
ENSDNOG00000009957	-	100	72.152	ENSCGRG00001023686	Ptcd1	100	71.730	Cricetulus_griseus_chok1gshd
ENSDNOG00000009957	-	99	72.034	ENSCGRG00000015031	Ptcd1	100	71.610	Cricetulus_griseus_crigri
ENSDNOG00000009957	-	86	44.839	ENSCSEG00000002378	ptcd1	84	44.935	Cynoglossus_semilaevis
ENSDNOG00000009957	-	90	46.154	ENSCVAG00000015826	ptcd1	86	46.835	Cyprinodon_variegatus
ENSDNOG00000009957	-	87	47.360	ENSCVAG00000003621	ptcd1	88	47.386	Cyprinodon_variegatus
ENSDNOG00000009957	-	87	49.758	ENSDARG00000076176	ptcd1	89	49.596	Danio_rerio
ENSDNOG00000009957	-	99	73.429	ENSDORG00000000740	Ptcd1	99	73.143	Dipodomys_ordii
ENSDNOG00000009957	-	89	41.108	ENSEBUG00000014515	ptcd1	99	41.766	Eptatretus_burgeri
ENSDNOG00000009957	-	100	80.141	ENSEASG00005002480	-	100	80.423	Equus_asinus_asinus
ENSDNOG00000009957	-	100	81.127	ENSECAG00000016617	-	100	80.845	Equus_caballus
ENSDNOG00000009957	-	83	47.428	ENSELUG00000016517	ptcd1	82	47.596	Esox_lucius
ENSDNOG00000009957	-	100	78.652	ENSFCAG00000015069	-	100	77.778	Felis_catus
ENSDNOG00000009957	-	87	59.502	ENSFALG00000013803	-	88	59.657	Ficedula_albicollis
ENSDNOG00000009957	-	100	75.035	ENSFDAG00000006393	-	100	74.894	Fukomys_damarensis
ENSDNOG00000009957	-	75	47.689	ENSFHEG00000012491	ptcd1	88	47.689	Fundulus_heteroclitus
ENSDNOG00000009957	-	82	47.414	ENSGMOG00000007639	ptcd1	91	47.586	Gadus_morhua
ENSDNOG00000009957	-	85	58.029	ENSGALG00000004711	-	88	57.590	Gallus_gallus
ENSDNOG00000009957	-	86	47.903	ENSGAFG00000013175	ptcd1	83	48.500	Gambusia_affinis
ENSDNOG00000009957	-	85	50.166	ENSGACG00000016607	ptcd1	89	50.000	Gasterosteus_aculeatus
ENSDNOG00000009957	-	92	53.561	ENSGAGG00000021832	-	99	53.582	Gopherus_agassizii
ENSDNOG00000009957	-	99	73.239	ENSGGOG00000015123	-	99	72.958	Gorilla_gorilla
ENSDNOG00000009957	-	85	48.440	ENSHBUG00000018275	ptcd1	80	48.896	Haplochromis_burtoni
ENSDNOG00000009957	-	100	75.668	ENSHGLG00000017621	-	100	75.668	Heterocephalus_glaber_female
ENSDNOG00000009957	-	100	75.668	ENSHGLG00100007218	-	100	75.668	Heterocephalus_glaber_male
ENSDNOG00000009957	-	83	48.552	ENSHCOG00000010784	ptcd1	82	48.722	Hippocampus_comes
ENSDNOG00000009957	-	100	75.424	ENSSTOG00000001682	-	100	74.576	Ictidomys_tridecemlineatus
ENSDNOG00000009957	-	100	70.845	ENSJJAG00000000319	Ptcd1	100	69.748	Jaculus_jaculus
ENSDNOG00000009957	-	85	47.855	ENSKMAG00000008708	ptcd1	81	48.562	Kryptolebias_marmoratus
ENSDNOG00000009957	-	88	45.440	ENSLBEG00000008061	ptcd1	84	46.463	Labrus_bergylta
ENSDNOG00000009957	-	85	57.120	ENSLACG00000011172	ptcd1	84	57.818	Latimeria_chalumnae
ENSDNOG00000009957	-	90	52.030	ENSLOCG00000004833	ptcd1	94	53.213	Lepisosteus_oculatus
ENSDNOG00000009957	-	100	73.212	ENSLAFG00000002588	-	100	72.587	Loxodonta_africana
ENSDNOG00000009957	-	99	73.229	ENSMFAG00000041324	-	99	73.229	Macaca_fascicularis
ENSDNOG00000009957	-	99	73.088	ENSMMUG00000030408	-	99	73.088	Macaca_mulatta
ENSDNOG00000009957	-	99	73.229	ENSMNEG00000043786	-	99	73.229	Macaca_nemestrina
ENSDNOG00000009957	-	99	55.241	ENSMLEG00000031179	-	99	56.638	Mandrillus_leucophaeus
ENSDNOG00000009957	-	86	50.163	ENSMAMG00000007623	ptcd1	80	50.254	Mastacembelus_armatus
ENSDNOG00000009957	-	85	48.046	ENSMZEG00005012722	ptcd1	81	48.322	Maylandia_zebra
ENSDNOG00000009957	-	98	54.242	ENSMGAG00000004211	-	81	58.333	Meleagris_gallopavo
ENSDNOG00000009957	-	99	77.525	ENSMICG00000017428	-	99	77.240	Microcebus_murinus
ENSDNOG00000009957	-	84	47.525	ENSMMOG00000020243	ptcd1	88	47.797	Mola_mola
ENSDNOG00000009957	-	99	58.546	ENSMODG00000001350	-	99	58.570	Monodelphis_domestica
ENSDNOG00000009957	-	95	46.657	ENSMALG00000018442	ptcd1	80	49.750	Monopterus_albus
ENSDNOG00000009957	-	99	73.513	MGP_CAROLIEiJ_G0028011	Ptcd1	99	73.654	Mus_caroli
ENSDNOG00000009957	-	99	73.513	ENSMUSG00000029624	Ptcd1	99	73.796	Mus_musculus
ENSDNOG00000009957	-	100	73.840	MGP_PahariEiJ_G0024580	Ptcd1	100	72.958	Mus_pahari
ENSDNOG00000009957	-	99	73.796	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.079	Mus_spretus
ENSDNOG00000009957	-	100	77.949	ENSMPUG00000016518	-	100	77.215	Mustela_putorius_furo
ENSDNOG00000009957	-	100	79.718	ENSMLUG00000010994	-	94	79.296	Myotis_lucifugus
ENSDNOG00000009957	-	86	48.315	ENSNBRG00000010079	ptcd1	85	48.179	Neolamprologus_brichardi
ENSDNOG00000009957	-	99	77.574	ENSNLEG00000011060	-	99	77.022	Nomascus_leucogenys
ENSDNOG00000009957	-	97	59.943	ENSMEUG00000006930	-	99	60.286	Notamacropus_eugenii
ENSDNOG00000009957	-	90	73.893	ENSOPRG00000013647	-	90	73.893	Ochotona_princeps
ENSDNOG00000009957	-	83	47.871	ENSONIG00000003168	ptcd1	95	47.547	Oreochromis_niloticus
ENSDNOG00000009957	-	80	57.019	ENSOANG00000007728	-	74	57.193	Ornithorhynchus_anatinus
ENSDNOG00000009957	-	99	74.294	ENSOCUG00000010584	-	98	73.729	Oryctolagus_cuniculus
ENSDNOG00000009957	-	91	45.814	ENSORLG00000009275	ptcd1	87	47.549	Oryzias_latipes
ENSDNOG00000009957	-	91	45.510	ENSORLG00020000988	ptcd1	87	47.222	Oryzias_latipes_hni
ENSDNOG00000009957	-	88	46.463	ENSORLG00015010557	ptcd1	87	46.732	Oryzias_latipes_hsok
ENSDNOG00000009957	-	91	45.413	ENSOMEG00000020627	ptcd1	89	47.068	Oryzias_melastigma
ENSDNOG00000009957	-	99	74.822	ENSOGAG00000010877	-	100	73.542	Otolemur_garnettii
ENSDNOG00000009957	-	100	72.433	ENSOARG00000018676	-	100	71.629	Ovis_aries
ENSDNOG00000009957	-	100	73.174	ENSPPAG00000036024	-	100	73.034	Pan_paniscus
ENSDNOG00000009957	-	100	79.437	ENSPPRG00000003478	-	100	77.997	Panthera_pardus
ENSDNOG00000009957	-	100	73.315	ENSPTRG00000019452	-	100	73.174	Pan_troglodytes
ENSDNOG00000009957	-	99	73.229	ENSPANG00000016730	-	99	73.229	Papio_anubis
ENSDNOG00000009957	-	84	54.667	ENSPKIG00000014215	ptcd1	86	53.947	Paramormyrops_kingsleyae
ENSDNOG00000009957	-	84	58.167	ENSPSIG00000011184	-	100	58.155	Pelodiscus_sinensis
ENSDNOG00000009957	-	72	42.256	ENSPMAG00000009667	ptcd1	100	42.418	Petromyzon_marinus
ENSDNOG00000009957	-	99	58.491	ENSPCIG00000024778	-	99	58.491	Phascolarctos_cinereus
ENSDNOG00000009957	-	84	48.425	ENSPFOG00000004458	ptcd1	82	48.662	Poecilia_formosa
ENSDNOG00000009957	-	86	47.735	ENSPLAG00000011051	ptcd1	82	48.495	Poecilia_latipinna
ENSDNOG00000009957	-	84	48.425	ENSPMEG00000020547	ptcd1	82	48.662	Poecilia_mexicana
ENSDNOG00000009957	-	85	47.308	ENSPREG00000000059	ptcd1	83	47.659	Poecilia_reticulata
ENSDNOG00000009957	-	93	75.495	ENSPPYG00000017377	-	99	75.038	Pongo_abelii
ENSDNOG00000009957	-	80	80.882	ENSPCAG00000001852	-	85	84.167	Procavia_capensis
ENSDNOG00000009957	-	98	78.386	ENSPCOG00000018596	-	98	77.954	Propithecus_coquereli
ENSDNOG00000009957	-	68	88.000	ENSPVAG00000007529	-	71	88.000	Pteropus_vampyrus
ENSDNOG00000009957	-	85	48.440	ENSPNYG00000019993	ptcd1	80	48.896	Pundamilia_nyererei
ENSDNOG00000009957	-	91	50.228	ENSPNAG00000014931	ptcd1	91	50.389	Pygocentrus_nattereri
ENSDNOG00000009957	-	99	73.484	ENSRNOG00000000987	Ptcd1	99	73.202	Rattus_norvegicus
ENSDNOG00000009957	-	99	73.580	ENSRBIG00000043393	-	99	73.580	Rhinopithecus_bieti
ENSDNOG00000009957	-	99	73.580	ENSRROG00000036420	-	99	73.580	Rhinopithecus_roxellana
ENSDNOG00000009957	-	100	74.543	ENSSBOG00000024114	-	100	73.625	Saimiri_boliviensis_boliviensis
ENSDNOG00000009957	-	99	56.563	ENSSHAG00000011376	-	93	62.802	Sarcophilus_harrisii
ENSDNOG00000009957	-	92	51.714	ENSSFOG00015007909	ptcd1	84	54.016	Scleropages_formosus
ENSDNOG00000009957	-	83	46.823	ENSSMAG00000000218	ptcd1	91	46.912	Scophthalmus_maximus
ENSDNOG00000009957	-	99	44.681	ENSSDUG00000015671	ptcd1	96	44.239	Seriola_dumerili
ENSDNOG00000009957	-	96	45.508	ENSSLDG00000014261	ptcd1	83	48.054	Seriola_lalandi_dorsalis
ENSDNOG00000009957	-	85	57.029	ENSSPUG00000003540	-	84	57.051	Sphenodon_punctatus
ENSDNOG00000009957	-	84	49.094	ENSSPAG00000011049	ptcd1	81	49.251	Stegastes_partitus
ENSDNOG00000009957	-	91	79.784	ENSSSCG00000007622	-	99	78.144	Sus_scrofa
ENSDNOG00000009957	-	86	59.578	ENSTGUG00000007563	-	99	60.227	Taeniopygia_guttata
ENSDNOG00000009957	-	85	48.112	ENSTRUG00000013471	ptcd1	79	48.469	Takifugu_rubripes
ENSDNOG00000009957	-	85	46.732	ENSTNIG00000008271	ptcd1	83	47.377	Tetraodon_nigroviridis
ENSDNOG00000009957	-	100	75.000	ENSTBEG00000011021	-	100	74.579	Tupaia_belangeri
ENSDNOG00000009957	-	100	76.479	ENSTTRG00000003006	-	100	76.479	Tursiops_truncatus
ENSDNOG00000009957	-	100	80.000	ENSUAMG00000008049	-	100	78.984	Ursus_americanus
ENSDNOG00000009957	-	99	78.501	ENSVVUG00000008836	-	100	77.337	Vulpes_vulpes
ENSDNOG00000009957	-	94	48.834	ENSXETG00000009891	ptcd1	88	51.299	Xenopus_tropicalis
ENSDNOG00000009957	-	86	46.962	ENSXMAG00000015540	ptcd1	82	48.223	Xiphophorus_maculatus