EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000011227 (Gene tree)
Gene ID: 101442539
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 27702 bases
Position: chrJH582923.1:169994-197695
Accession: 30859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000008751	ResIII	PF04851.15	1.8e-25	1	2
ENSDNOP00000008751	ResIII	PF04851.15	1.8e-25	2	2
ENSDNOP00000008751	DEAD	PF00270.29	1.4e-51	1	2
ENSDNOP00000008751	DEAD	PF00270.29	1.4e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000011287	SNRNP200-201	6574	-	ENSDNOP00000008751	2122 (aa)	-	UPI0003CC116A

Gene Model

Click here to download ENSDNOG00000011227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000011227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000011227	SNRNP200	79	46.892	ENSDNOG00000010279	ASCC3	92	46.892
ENSDNOG00000011227	SNRNP200	73	31.526	ENSDNOG00000004776	HFM1	55	31.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000011227	SNRNP200	100	98.361	ENSG00000144028	SNRNP200	100	98.361	Homo_sapiens
ENSDNOG00000011227	SNRNP200	99	89.573	ENSAPOG00000010223	snrnp200	99	89.466	Acanthochromis_polyacanthus
ENSDNOG00000011227	SNRNP200	100	98.315	ENSAMEG00000008996	SNRNP200	100	98.315	Ailuropoda_melanoleuca
ENSDNOG00000011227	SNRNP200	97	88.704	ENSACIG00000001764	snrnp200	98	88.704	Amphilophus_citrinellus
ENSDNOG00000011227	SNRNP200	99	89.573	ENSAOCG00000024593	snrnp200	100	88.597	Amphiprion_ocellaris
ENSDNOG00000011227	SNRNP200	97	88.544	ENSAPEG00000012554	snrnp200	100	88.544	Amphiprion_percula
ENSDNOG00000011227	SNRNP200	99	89.432	ENSATEG00000022522	snrnp200	99	89.326	Anabas_testudineus
ENSDNOG00000011227	SNRNP200	99	96.275	ENSAPLG00000004313	SNRNP200	100	96.275	Anas_platyrhynchos
ENSDNOG00000011227	SNRNP200	99	95.867	ENSACAG00000000434	SNRNP200	100	95.867	Anolis_carolinensis
ENSDNOG00000011227	SNRNP200	100	93.797	ENSANAG00000036625	SNRNP200	100	94.216	Aotus_nancymaae
ENSDNOG00000011227	SNRNP200	99	89.244	ENSACLG00000011188	snrnp200	99	89.139	Astatotilapia_calliptera
ENSDNOG00000011227	SNRNP200	99	89.197	ENSAMXG00000005684	snrnp200	99	89.092	Astyanax_mexicanus
ENSDNOG00000011227	SNRNP200	100	98.034	ENSBTAG00000000848	SNRNP200	100	98.034	Bos_taurus
ENSDNOG00000011227	SNRNP200	100	98.315	ENSCJAG00000007514	SNRNP200	100	98.784	Callithrix_jacchus
ENSDNOG00000011227	SNRNP200	100	97.527	ENSCAFG00020019979	SNRNP200	100	98.784	Canis_lupus_dingo
ENSDNOG00000011227	SNRNP200	100	98.127	ENSCHIG00000020611	SNRNP200	100	98.127	Capra_hircus
ENSDNOG00000011227	SNRNP200	100	98.268	ENSTSYG00000010467	SNRNP200	100	98.784	Carlito_syrichta
ENSDNOG00000011227	SNRNP200	99	97.884	ENSCAPG00000017234	SNRNP200	99	97.884	Cavia_aperea
ENSDNOG00000011227	SNRNP200	100	98.174	ENSCPOG00000006776	SNRNP200	100	98.174	Cavia_porcellus
ENSDNOG00000011227	SNRNP200	100	98.315	ENSCCAG00000033962	SNRNP200	100	98.784	Cebus_capucinus
ENSDNOG00000011227	SNRNP200	100	98.361	ENSCATG00000015790	SNRNP200	100	98.784	Cercocebus_atys
ENSDNOG00000011227	SNRNP200	100	98.174	ENSCLAG00000004116	SNRNP200	100	98.174	Chinchilla_lanigera
ENSDNOG00000011227	SNRNP200	100	98.315	ENSCSAG00000017369	SNRNP200	100	98.315	Chlorocebus_sabaeus
ENSDNOG00000011227	SNRNP200	75	99.401	ENSCHOG00000012981	-	59	99.401	Choloepus_hoffmanni
ENSDNOG00000011227	SNRNP200	100	96.353	ENSCPBG00000022571	SNRNP200	99	97.872	Chrysemys_picta_bellii
ENSDNOG00000011227	SNRNP200	99	75.385	ENSCING00000005082	-	99	75.525	Ciona_intestinalis
ENSDNOG00000011227	SNRNP200	100	92.854	ENSCANG00000033932	SNRNP200	100	98.208	Colobus_angolensis_palliatus
ENSDNOG00000011227	SNRNP200	100	98.221	ENSCGRG00001022610	Snrnp200	100	98.221	Cricetulus_griseus_chok1gshd
ENSDNOG00000011227	SNRNP200	100	97.662	ENSCGRG00000016472	Snrnp200	100	97.662	Cricetulus_griseus_crigri
ENSDNOG00000011227	SNRNP200	100	88.624	ENSCSEG00000016399	snrnp200	100	88.624	Cynoglossus_semilaevis
ENSDNOG00000011227	SNRNP200	100	84.363	ENSCVAG00000017631	snrnp200	99	84.363	Cyprinodon_variegatus
ENSDNOG00000011227	SNRNP200	100	88.998	ENSDARG00000077536	snrnp200	99	88.998	Danio_rerio
ENSDNOG00000011227	SNRNP200	100	95.605	ENSDORG00000005861	Snrnp200	100	95.605	Dipodomys_ordii
ENSDNOG00000011227	SNRNP200	100	73.557	FBgn0263599	l(3)72Ab	99	73.464	Drosophila_melanogaster
ENSDNOG00000011227	SNRNP200	95	99.569	ENSETEG00000000162	SNRNP200	74	99.569	Echinops_telfairi
ENSDNOG00000011227	SNRNP200	83	79.193	ENSEBUG00000016524	snrnp200	95	79.193	Eptatretus_burgeri
ENSDNOG00000011227	SNRNP200	100	97.203	ENSEASG00005001884	SNRNP200	100	97.203	Equus_asinus_asinus
ENSDNOG00000011227	SNRNP200	100	98.315	ENSECAG00000019675	SNRNP200	99	99.530	Equus_caballus
ENSDNOG00000011227	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSDNOG00000011227	SNRNP200	99	89.432	ENSELUG00000018948	snrnp200	99	89.326	Esox_lucius
ENSDNOG00000011227	SNRNP200	100	98.361	ENSFCAG00000010699	SNRNP200	100	98.361	Felis_catus
ENSDNOG00000011227	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSDNOG00000011227	SNRNP200	100	98.174	ENSFDAG00000004683	SNRNP200	100	98.174	Fukomys_damarensis
ENSDNOG00000011227	SNRNP200	100	86.517	ENSFHEG00000003786	snrnp200	99	86.517	Fundulus_heteroclitus
ENSDNOG00000011227	SNRNP200	100	88.364	ENSGMOG00000004881	snrnp200	99	88.318	Gadus_morhua
ENSDNOG00000011227	SNRNP200	100	86.704	ENSGAFG00000010807	snrnp200	99	86.704	Gambusia_affinis
ENSDNOG00000011227	SNRNP200	100	88.650	ENSGACG00000011474	snrnp200	99	88.557	Gasterosteus_aculeatus
ENSDNOG00000011227	SNRNP200	95	97.390	ENSGAGG00000016069	SNRNP200	99	96.144	Gopherus_agassizii
ENSDNOG00000011227	SNRNP200	100	98.361	ENSGGOG00000005174	SNRNP200	100	98.784	Gorilla_gorilla
ENSDNOG00000011227	SNRNP200	97	86.286	ENSHBUG00000011322	snrnp200	99	86.332	Haplochromis_burtoni
ENSDNOG00000011227	SNRNP200	100	98.268	ENSHGLG00000006654	SNRNP200	100	98.268	Heterocephalus_glaber_female
ENSDNOG00000011227	SNRNP200	100	98.268	ENSHGLG00100018594	SNRNP200	100	98.268	Heterocephalus_glaber_male
ENSDNOG00000011227	SNRNP200	100	98.221	ENSSTOG00000016351	SNRNP200	100	98.221	Ictidomys_tridecemlineatus
ENSDNOG00000011227	SNRNP200	100	98.034	ENSJJAG00000023659	Snrnp200	100	98.034	Jaculus_jaculus
ENSDNOG00000011227	SNRNP200	100	86.281	ENSKMAG00000003665	snrnp200	99	86.281	Kryptolebias_marmoratus
ENSDNOG00000011227	SNRNP200	100	88.858	ENSLBEG00000021585	snrnp200	99	88.858	Labrus_bergylta
ENSDNOG00000011227	SNRNP200	82	92.567	ENSLACG00000000226	SNRNP200	99	93.001	Latimeria_chalumnae
ENSDNOG00000011227	SNRNP200	100	91.011	ENSLOCG00000015198	snrnp200	99	91.011	Lepisosteus_oculatus
ENSDNOG00000011227	SNRNP200	100	98.081	ENSLAFG00000015626	SNRNP200	100	98.081	Loxodonta_africana
ENSDNOG00000011227	SNRNP200	100	98.315	ENSMFAG00000040174	SNRNP200	100	98.784	Macaca_fascicularis
ENSDNOG00000011227	SNRNP200	100	98.315	ENSMMUG00000023261	SNRNP200	100	98.784	Macaca_mulatta
ENSDNOG00000011227	SNRNP200	100	98.268	ENSMNEG00000032398	SNRNP200	100	98.632	Macaca_nemestrina
ENSDNOG00000011227	SNRNP200	100	98.361	ENSMLEG00000019083	SNRNP200	100	98.784	Mandrillus_leucophaeus
ENSDNOG00000011227	SNRNP200	100	88.910	ENSMAMG00000007851	snrnp200	99	88.863	Mastacembelus_armatus
ENSDNOG00000011227	SNRNP200	97	86.286	ENSMZEG00005010787	snrnp200	99	86.332	Maylandia_zebra
ENSDNOG00000011227	SNRNP200	97	95.791	ENSMGAG00000001831	SNRNP200	100	95.791	Meleagris_gallopavo
ENSDNOG00000011227	SNRNP200	100	98.174	ENSMAUG00000011825	Snrnp200	100	98.174	Mesocricetus_auratus
ENSDNOG00000011227	SNRNP200	100	98.221	ENSMICG00000004710	SNRNP200	100	98.480	Microcebus_murinus
ENSDNOG00000011227	SNRNP200	100	95.599	ENSMOCG00000011814	Snrnp200	100	95.599	Microtus_ochrogaster
ENSDNOG00000011227	SNRNP200	99	87.835	ENSMMOG00000014167	snrnp200	99	87.734	Mola_mola
ENSDNOG00000011227	SNRNP200	100	97.472	ENSMODG00000008475	SNRNP200	100	97.472	Monodelphis_domestica
ENSDNOG00000011227	SNRNP200	99	89.479	ENSMALG00000001973	snrnp200	99	89.373	Monopterus_albus
ENSDNOG00000011227	SNRNP200	100	97.987	MGP_CAROLIEiJ_G0024250	Snrnp200	100	97.987	Mus_caroli
ENSDNOG00000011227	SNRNP200	100	98.034	ENSMUSG00000003660	Snrnp200	100	98.034	Mus_musculus
ENSDNOG00000011227	SNRNP200	100	98.081	MGP_PahariEiJ_G0025695	Snrnp200	100	98.081	Mus_pahari
ENSDNOG00000011227	SNRNP200	100	98.034	MGP_SPRETEiJ_G0025170	Snrnp200	100	98.895	Mus_spretus
ENSDNOG00000011227	SNRNP200	100	98.268	ENSMPUG00000008949	SNRNP200	100	98.268	Mustela_putorius_furo
ENSDNOG00000011227	SNRNP200	100	97.896	ENSMLUG00000010493	SNRNP200	100	97.896	Myotis_lucifugus
ENSDNOG00000011227	SNRNP200	100	94.242	ENSMLUG00000027511	-	100	94.242	Myotis_lucifugus
ENSDNOG00000011227	SNRNP200	100	98.268	ENSNGAG00000021993	Snrnp200	100	98.268	Nannospalax_galili
ENSDNOG00000011227	SNRNP200	90	88.696	ENSNBRG00000017960	snrnp200	98	88.696	Neolamprologus_brichardi
ENSDNOG00000011227	SNRNP200	100	93.628	ENSNLEG00000000025	SNRNP200	100	95.137	Nomascus_leucogenys
ENSDNOG00000011227	SNRNP200	100	98.611	ENSMEUG00000010532	SNRNP200	79	98.611	Notamacropus_eugenii
ENSDNOG00000011227	SNRNP200	100	94.382	ENSOPRG00000015464	SNRNP200	100	94.382	Ochotona_princeps
ENSDNOG00000011227	SNRNP200	100	98.127	ENSODEG00000008366	SNRNP200	100	98.127	Octodon_degus
ENSDNOG00000011227	SNRNP200	99	89.244	ENSONIG00000010714	snrnp200	99	89.139	Oreochromis_niloticus
ENSDNOG00000011227	SNRNP200	100	98.221	ENSOCUG00000009864	SNRNP200	100	98.221	Oryctolagus_cuniculus
ENSDNOG00000011227	SNRNP200	100	88.904	ENSORLG00000012286	snrnp200	100	88.904	Oryzias_latipes
ENSDNOG00000011227	SNRNP200	100	88.951	ENSORLG00020004648	snrnp200	100	88.951	Oryzias_latipes_hni
ENSDNOG00000011227	SNRNP200	100	88.904	ENSORLG00015019114	snrnp200	100	88.904	Oryzias_latipes_hsok
ENSDNOG00000011227	SNRNP200	99	89.150	ENSOMEG00000011834	snrnp200	99	89.045	Oryzias_melastigma
ENSDNOG00000011227	SNRNP200	100	98.268	ENSOGAG00000006879	SNRNP200	100	98.268	Otolemur_garnettii
ENSDNOG00000011227	SNRNP200	100	97.099	ENSOARG00000013949	SNRNP200	100	97.099	Ovis_aries
ENSDNOG00000011227	SNRNP200	100	98.361	ENSPPAG00000041559	SNRNP200	100	98.784	Pan_paniscus
ENSDNOG00000011227	SNRNP200	100	98.361	ENSPPRG00000004435	SNRNP200	100	98.361	Panthera_pardus
ENSDNOG00000011227	SNRNP200	100	97.893	ENSPTIG00000006380	SNRNP200	100	97.893	Panthera_tigris_altaica
ENSDNOG00000011227	SNRNP200	100	98.361	ENSPTRG00000012230	SNRNP200	100	98.784	Pan_troglodytes
ENSDNOG00000011227	SNRNP200	100	98.408	ENSPANG00000006017	SNRNP200	100	98.784	Papio_anubis
ENSDNOG00000011227	SNRNP200	100	89.700	ENSPKIG00000014762	snrnp200	99	89.700	Paramormyrops_kingsleyae
ENSDNOG00000011227	SNRNP200	100	95.367	ENSPSIG00000008580	SNRNP200	100	95.367	Pelodiscus_sinensis
ENSDNOG00000011227	SNRNP200	100	97.425	ENSPCIG00000023050	SNRNP200	100	97.425	Phascolarctos_cinereus
ENSDNOG00000011227	SNRNP200	100	88.956	ENSPFOG00000015110	snrnp200	99	88.956	Poecilia_formosa
ENSDNOG00000011227	SNRNP200	97	88.626	ENSPLAG00000006711	snrnp200	99	88.626	Poecilia_latipinna
ENSDNOG00000011227	SNRNP200	97	88.681	ENSPMEG00000021166	snrnp200	99	88.681	Poecilia_mexicana
ENSDNOG00000011227	SNRNP200	100	89.139	ENSPREG00000008875	snrnp200	99	89.139	Poecilia_reticulata
ENSDNOG00000011227	SNRNP200	100	98.361	ENSPPYG00000012068	SNRNP200	100	98.361	Pongo_abelii
ENSDNOG00000011227	SNRNP200	95	99.087	ENSPCAG00000008536	SNRNP200	86	99.087	Procavia_capensis
ENSDNOG00000011227	SNRNP200	100	98.268	ENSPCOG00000024608	SNRNP200	100	98.632	Propithecus_coquereli
ENSDNOG00000011227	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSDNOG00000011227	SNRNP200	99	84.824	ENSPNYG00000017476	snrnp200	99	84.734	Pundamilia_nyererei
ENSDNOG00000011227	SNRNP200	100	84.644	ENSPNAG00000010998	snrnp200	99	84.644	Pygocentrus_nattereri
ENSDNOG00000011227	SNRNP200	100	98.174	ENSRNOG00000012157	Snrnp200	100	98.174	Rattus_norvegicus
ENSDNOG00000011227	SNRNP200	100	98.361	ENSRBIG00000044690	-	100	98.784	Rhinopithecus_bieti
ENSDNOG00000011227	SNRNP200	100	98.361	ENSRROG00000037952	-	100	98.784	Rhinopithecus_roxellana
ENSDNOG00000011227	SNRNP200	100	98.315	ENSSBOG00000035471	SNRNP200	100	98.784	Saimiri_boliviensis_boliviensis
ENSDNOG00000011227	SNRNP200	97	97.291	ENSSHAG00000000758	SNRNP200	100	97.291	Sarcophilus_harrisii
ENSDNOG00000011227	SNRNP200	99	90.277	ENSSFOG00015018826	snrnp200	99	90.169	Scleropages_formosus
ENSDNOG00000011227	SNRNP200	99	89.103	ENSSMAG00000005463	snrnp200	99	88.998	Scophthalmus_maximus
ENSDNOG00000011227	SNRNP200	99	89.432	ENSSDUG00000021410	snrnp200	99	89.326	Seriola_dumerili
ENSDNOG00000011227	SNRNP200	99	89.385	ENSSLDG00000010884	snrnp200	99	89.279	Seriola_lalandi_dorsalis
ENSDNOG00000011227	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSDNOG00000011227	SNRNP200	100	96.114	ENSSPUG00000003726	-	100	96.114	Sphenodon_punctatus
ENSDNOG00000011227	SNRNP200	99	89.479	ENSSPAG00000001842	snrnp200	99	89.373	Stegastes_partitus
ENSDNOG00000011227	SNRNP200	100	98.268	ENSSSCG00000008127	SNRNP200	100	98.268	Sus_scrofa
ENSDNOG00000011227	SNRNP200	99	86.196	ENSTGUG00000014475	-	100	86.196	Taeniopygia_guttata
ENSDNOG00000011227	SNRNP200	99	89.103	ENSTRUG00000001307	snrnp200	99	88.998	Takifugu_rubripes
ENSDNOG00000011227	SNRNP200	100	84.249	ENSTNIG00000004320	snrnp200	100	84.249	Tetraodon_nigroviridis
ENSDNOG00000011227	SNRNP200	83	99.394	ENSTBEG00000003329	-	67	99.394	Tupaia_belangeri
ENSDNOG00000011227	SNRNP200	100	97.987	ENSTTRG00000004983	SNRNP200	100	97.987	Tursiops_truncatus
ENSDNOG00000011227	SNRNP200	75	92.636	ENSUAMG00000008395	-	95	92.636	Ursus_americanus
ENSDNOG00000011227	SNRNP200	100	98.361	ENSUMAG00000012385	SNRNP200	100	98.361	Ursus_maritimus
ENSDNOG00000011227	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSDNOG00000011227	SNRNP200	100	98.132	ENSVVUG00000026247	SNRNP200	100	98.784	Vulpes_vulpes
ENSDNOG00000011227	SNRNP200	100	92.987	ENSXETG00000001243	snrnp200	100	92.987	Xenopus_tropicalis
ENSDNOG00000011227	SNRNP200	97	88.919	ENSXMAG00000002058	snrnp200	98	88.919	Xiphophorus_maculatus