EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000011494 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 17978 bases
Position: chrJH584070.1:616420-634397
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000008911	zf-CCCH	PF00642.24	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000011499	RC3H1-201	1881	-	ENSDNOP00000008911	626 (aa)	-	UPI0003CC145E

Gene Model

Click here to download ENSDNOG00000011494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000011494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000011494	RC3H1	97	38.556	ENSDNOG00000014557	RC3H2	53	38.331

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000011494	RC3H1	99	95.484	ENSG00000135870	RC3H1	55	95.484	Homo_sapiens
ENSDNOG00000011494	RC3H1	99	94.373	ENSAMEG00000015657	RC3H1	55	94.373	Ailuropoda_melanoleuca
ENSDNOG00000011494	RC3H1	99	82.120	ENSAPLG00000005341	RC3H1	55	82.120	Anas_platyrhynchos
ENSDNOG00000011494	RC3H1	99	79.650	ENSACAG00000015271	RC3H1	55	79.650	Anolis_carolinensis
ENSDNOG00000011494	RC3H1	99	95.177	ENSANAG00000036716	RC3H1	55	95.177	Aotus_nancymaae
ENSDNOG00000011494	RC3H1	99	94.032	ENSBTAG00000052708	RC3H1	55	94.032	Bos_taurus
ENSDNOG00000011494	RC3H1	99	94.855	ENSCJAG00000009106	RC3H1	55	94.855	Callithrix_jacchus
ENSDNOG00000011494	RC3H1	99	95.338	ENSCAFG00000014434	RC3H1	55	95.338	Canis_familiaris
ENSDNOG00000011494	RC3H1	99	95.338	ENSCAFG00020017112	RC3H1	55	95.338	Canis_lupus_dingo
ENSDNOG00000011494	RC3H1	99	95.000	ENSCHIG00000002873	RC3H1	56	94.695	Capra_hircus
ENSDNOG00000011494	RC3H1	99	93.740	ENSTSYG00000003913	RC3H1	55	93.740	Carlito_syrichta
ENSDNOG00000011494	RC3H1	99	87.319	ENSCPOG00000004349	RC3H1	54	86.838	Cavia_porcellus
ENSDNOG00000011494	RC3H1	99	94.534	ENSCCAG00000025652	RC3H1	58	94.534	Cebus_capucinus
ENSDNOG00000011494	RC3H1	99	95.820	ENSCATG00000033497	RC3H1	55	95.820	Cercocebus_atys
ENSDNOG00000011494	RC3H1	98	92.707	ENSCLAG00000011267	RC3H1	55	92.777	Chinchilla_lanigera
ENSDNOG00000011494	RC3H1	99	85.486	ENSCPBG00000014670	RC3H1	58	84.370	Chrysemys_picta_bellii
ENSDNOG00000011494	RC3H1	99	95.820	ENSCANG00000032120	RC3H1	55	95.820	Colobus_angolensis_palliatus
ENSDNOG00000011494	RC3H1	99	91.961	ENSCGRG00001020812	Rc3h1	55	91.318	Cricetulus_griseus_chok1gshd
ENSDNOG00000011494	RC3H1	99	91.961	ENSCGRG00000011952	Rc3h1	55	91.318	Cricetulus_griseus_crigri
ENSDNOG00000011494	RC3H1	98	92.695	ENSDORG00000004855	Rc3h1	55	92.605	Dipodomys_ordii
ENSDNOG00000011494	RC3H1	87	94.312	ENSETEG00000012064	RC3H1	52	94.312	Echinops_telfairi
ENSDNOG00000011494	RC3H1	99	94.032	ENSEASG00005017000	RC3H1	55	94.032	Equus_asinus_asinus
ENSDNOG00000011494	RC3H1	99	94.032	ENSECAG00000021208	RC3H1	58	94.032	Equus_caballus
ENSDNOG00000011494	RC3H1	88	94.186	ENSEEUG00000014861	RC3H1	51	94.186	Erinaceus_europaeus
ENSDNOG00000011494	RC3H1	99	95.016	ENSFCAG00000014924	RC3H1	55	95.016	Felis_catus
ENSDNOG00000011494	RC3H1	99	79.621	ENSFALG00000002947	RC3H1	55	78.673	Ficedula_albicollis
ENSDNOG00000011494	RC3H1	99	92.777	ENSFDAG00000013303	RC3H1	55	92.777	Fukomys_damarensis
ENSDNOG00000011494	RC3H1	99	81.659	ENSGALG00000004587	RC3H1	60	85.473	Gallus_gallus
ENSDNOG00000011494	RC3H1	99	83.280	ENSGAGG00000018194	RC3H1	58	82.803	Gopherus_agassizii
ENSDNOG00000011494	RC3H1	99	87.540	ENSGGOG00000005735	RC3H1	55	87.540	Gorilla_gorilla
ENSDNOG00000011494	RC3H1	78	90.860	ENSHGLG00000004183	-	51	90.786	Heterocephalus_glaber_female
ENSDNOG00000011494	RC3H1	99	92.616	ENSHGLG00100008577	RC3H1	55	92.616	Heterocephalus_glaber_male
ENSDNOG00000011494	RC3H1	99	93.098	ENSSTOG00000016033	RC3H1	55	93.098	Ictidomys_tridecemlineatus
ENSDNOG00000011494	RC3H1	99	93.248	ENSJJAG00000018915	Rc3h1	55	92.605	Jaculus_jaculus
ENSDNOG00000011494	RC3H1	99	65.409	ENSLACG00000016186	RC3H1	61	66.212	Latimeria_chalumnae
ENSDNOG00000011494	RC3H1	99	95.981	ENSLAFG00000004367	RC3H1	57	95.981	Loxodonta_africana
ENSDNOG00000011494	RC3H1	99	95.659	ENSMFAG00000033725	RC3H1	55	95.659	Macaca_fascicularis
ENSDNOG00000011494	RC3H1	99	95.806	ENSMMUG00000000630	RC3H1	56	95.498	Macaca_mulatta
ENSDNOG00000011494	RC3H1	99	95.820	ENSMNEG00000035968	RC3H1	55	95.820	Macaca_nemestrina
ENSDNOG00000011494	RC3H1	99	95.659	ENSMLEG00000037455	RC3H1	55	95.659	Mandrillus_leucophaeus
ENSDNOG00000011494	RC3H1	99	91.787	ENSMAUG00000020864	Rc3h1	58	90.982	Mesocricetus_auratus
ENSDNOG00000011494	RC3H1	99	95.659	ENSMICG00000003000	RC3H1	55	95.659	Microcebus_murinus
ENSDNOG00000011494	RC3H1	99	90.836	ENSMOCG00000016587	Rc3h1	58	90.193	Microtus_ochrogaster
ENSDNOG00000011494	RC3H1	99	88.907	ENSMODG00000004289	RC3H1	55	88.907	Monodelphis_domestica
ENSDNOG00000011494	RC3H1	99	90.836	MGP_CAROLIEiJ_G0014756	Rc3h1	55	90.032	Mus_caroli
ENSDNOG00000011494	RC3H1	99	90.806	ENSMUSG00000040423	Rc3h1	55	90.000	Mus_musculus
ENSDNOG00000011494	RC3H1	99	90.354	MGP_PahariEiJ_G0027992	Rc3h1	55	89.550	Mus_pahari
ENSDNOG00000011494	RC3H1	99	90.806	MGP_SPRETEiJ_G0015563	Rc3h1	55	90.000	Mus_spretus
ENSDNOG00000011494	RC3H1	99	94.061	ENSMPUG00000004747	RC3H1	55	93.408	Mustela_putorius_furo
ENSDNOG00000011494	RC3H1	99	92.765	ENSMLUG00000011127	RC3H1	55	92.765	Myotis_lucifugus
ENSDNOG00000011494	RC3H1	99	92.926	ENSNGAG00000011135	Rc3h1	55	92.122	Nannospalax_galili
ENSDNOG00000011494	RC3H1	99	95.016	ENSNLEG00000015327	RC3H1	55	95.016	Nomascus_leucogenys
ENSDNOG00000011494	RC3H1	99	88.264	ENSOPRG00000013068	RC3H1	55	88.264	Ochotona_princeps
ENSDNOG00000011494	RC3H1	99	92.295	ENSODEG00000014185	RC3H1	55	92.295	Octodon_degus
ENSDNOG00000011494	RC3H1	99	87.163	ENSOANG00000000924	RC3H1	55	86.054	Ornithorhynchus_anatinus
ENSDNOG00000011494	RC3H1	99	94.212	ENSOCUG00000004930	RC3H1	55	94.212	Oryctolagus_cuniculus
ENSDNOG00000011494	RC3H1	99	90.705	ENSOGAG00000004044	RC3H1	55	90.705	Otolemur_garnettii
ENSDNOG00000011494	RC3H1	99	93.930	ENSOARG00000013011	RC3H1	55	93.930	Ovis_aries
ENSDNOG00000011494	RC3H1	99	95.338	ENSPPAG00000039253	RC3H1	55	95.338	Pan_paniscus
ENSDNOG00000011494	RC3H1	99	95.645	ENSPPRG00000009007	RC3H1	55	95.645	Panthera_pardus
ENSDNOG00000011494	RC3H1	99	94.577	ENSPTIG00000015326	RC3H1	55	94.577	Panthera_tigris_altaica
ENSDNOG00000011494	RC3H1	99	95.338	ENSPTRG00000001702	RC3H1	55	95.338	Pan_troglodytes
ENSDNOG00000011494	RC3H1	99	95.659	ENSPANG00000008886	RC3H1	55	95.659	Papio_anubis
ENSDNOG00000011494	RC3H1	99	84.713	ENSPSIG00000016181	RC3H1	55	83.917	Pelodiscus_sinensis
ENSDNOG00000011494	RC3H1	99	90.193	ENSPEMG00000011966	Rc3h1	55	89.550	Peromyscus_maniculatus_bairdii
ENSDNOG00000011494	RC3H1	68	88.679	ENSPCIG00000002058	RC3H1	53	87.500	Phascolarctos_cinereus
ENSDNOG00000011494	RC3H1	99	95.645	ENSPPYG00000000490	RC3H1	59	95.645	Pongo_abelii
ENSDNOG00000011494	RC3H1	99	89.871	ENSPCAG00000010775	RC3H1	59	89.871	Procavia_capensis
ENSDNOG00000011494	RC3H1	99	95.820	ENSPCOG00000021795	RC3H1	64	95.820	Propithecus_coquereli
ENSDNOG00000011494	RC3H1	99	90.193	ENSPVAG00000007593	RC3H1	54	90.193	Pteropus_vampyrus
ENSDNOG00000011494	RC3H1	98	49.145	ENSPNAG00000023439	rc3h1a	58	46.177	Pygocentrus_nattereri
ENSDNOG00000011494	RC3H1	99	95.820	ENSRBIG00000037743	RC3H1	55	95.820	Rhinopithecus_bieti
ENSDNOG00000011494	RC3H1	99	95.498	ENSRROG00000036546	RC3H1	55	95.498	Rhinopithecus_roxellana
ENSDNOG00000011494	RC3H1	99	94.516	ENSSBOG00000010664	RC3H1	62	94.516	Saimiri_boliviensis_boliviensis
ENSDNOG00000011494	RC3H1	99	87.781	ENSSHAG00000007589	RC3H1	55	87.781	Sarcophilus_harrisii
ENSDNOG00000011494	RC3H1	93	81.387	ENSSPUG00000018472	RC3H1	54	80.372	Sphenodon_punctatus
ENSDNOG00000011494	RC3H1	99	95.323	ENSSSCG00000015498	RC3H1	58	95.323	Sus_scrofa
ENSDNOG00000011494	RC3H1	99	80.763	ENSTGUG00000004090	RC3H1	55	80.763	Taeniopygia_guttata
ENSDNOG00000011494	RC3H1	99	95.338	ENSTTRG00000008572	RC3H1	55	95.338	Tursiops_truncatus
ENSDNOG00000011494	RC3H1	99	93.248	ENSUAMG00000019525	RC3H1	55	93.248	Ursus_americanus
ENSDNOG00000011494	RC3H1	99	94.373	ENSUMAG00000020087	RC3H1	55	94.373	Ursus_maritimus
ENSDNOG00000011494	RC3H1	99	94.728	ENSVVUG00000014201	RC3H1	55	94.728	Vulpes_vulpes
ENSDNOG00000011494	RC3H1	99	70.728	ENSXETG00000020030	rc3h1	54	69.572	Xenopus_tropicalis