EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000014978 (Gene tree)
Gene ID: 101420978
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 19170 bases
Position: chrJH569202.1:120698-139867
Accession: 101420978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000033409	zf-U11-48K	PF05253.12	4.6e-10	1	1
ENSDNOP00000033629	zf-U11-48K	PF05253.12	5.1e-10	1	1
ENSDNOP00000011601	zf-U11-48K	PF05253.12	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000034282	SNRNP48-203	846	-	ENSDNOP00000033629	145 (aa)	-	UPI000328CEAD
ENSDNOT00000043382	SNRNP48-202	825	-	ENSDNOP00000033409	138 (aa)	-	UPI0003CBF563
ENSDNOT00000014973	SNRNP48-201	2610	-	ENSDNOP00000011601	340 (aa)	XP_004464607	UPI00032900CA

Gene Model

Click here to download ENSDNOG00000014978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000014978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000014978	SNRNP48	100	90.882	ENSG00000168566	SNRNP48	100	90.882	Homo_sapiens
ENSDNOG00000014978	SNRNP48	80	47.857	ENSAPOG00000021430	snrnp48	80	48.561	Acanthochromis_polyacanthus
ENSDNOG00000014978	SNRNP48	99	87.644	ENSAMEG00000017349	SNRNP48	100	87.644	Ailuropoda_melanoleuca
ENSDNOG00000014978	SNRNP48	96	34.507	ENSACIG00000002032	snrnp48	84	45.517	Amphilophus_citrinellus
ENSDNOG00000014978	SNRNP48	82	47.405	ENSAOCG00000010562	snrnp48	97	42.776	Amphiprion_ocellaris
ENSDNOG00000014978	SNRNP48	82	47.387	ENSAPEG00000003231	snrnp48	97	42.735	Amphiprion_percula
ENSDNOG00000014978	SNRNP48	95	44.214	ENSATEG00000020210	snrnp48	81	49.123	Anabas_testudineus
ENSDNOG00000014978	SNRNP48	83	65.753	ENSACAG00000002811	SNRNP48	90	65.068	Anolis_carolinensis
ENSDNOG00000014978	SNRNP48	100	90.588	ENSANAG00000033538	SNRNP48	100	90.588	Aotus_nancymaae
ENSDNOG00000014978	SNRNP48	91	44.969	ENSAMXG00000015309	snrnp48	84	47.552	Astyanax_mexicanus
ENSDNOG00000014978	SNRNP48	99	86.866	ENSBTAG00000001123	SNRNP48	99	86.866	Bos_taurus
ENSDNOG00000014978	SNRNP48	100	90.294	ENSCJAG00000021330	SNRNP48	100	90.294	Callithrix_jacchus
ENSDNOG00000014978	SNRNP48	99	91.642	ENSCAFG00000009574	SNRNP48	83	90.855	Canis_familiaris
ENSDNOG00000014978	SNRNP48	99	90.855	ENSCAFG00020013203	SNRNP48	98	91.642	Canis_lupus_dingo
ENSDNOG00000014978	SNRNP48	99	87.761	ENSCHIG00000015216	SNRNP48	99	87.761	Capra_hircus
ENSDNOG00000014978	SNRNP48	100	90.000	ENSTSYG00000000698	SNRNP48	100	90.000	Carlito_syrichta
ENSDNOG00000014978	SNRNP48	91	83.766	ENSCAPG00000006768	SNRNP48	100	83.766	Cavia_aperea
ENSDNOG00000014978	SNRNP48	100	86.471	ENSCPOG00000007910	SNRNP48	100	86.471	Cavia_porcellus
ENSDNOG00000014978	SNRNP48	100	89.118	ENSCCAG00000035652	SNRNP48	100	89.118	Cebus_capucinus
ENSDNOG00000014978	SNRNP48	100	90.294	ENSCATG00000033947	SNRNP48	100	90.294	Cercocebus_atys
ENSDNOG00000014978	SNRNP48	100	86.765	ENSCLAG00000003765	SNRNP48	100	86.765	Chinchilla_lanigera
ENSDNOG00000014978	SNRNP48	100	91.176	ENSCSAG00000007409	SNRNP48	100	91.176	Chlorocebus_sabaeus
ENSDNOG00000014978	SNRNP48	86	63.091	ENSCPBG00000019146	SNRNP48	96	63.091	Chrysemys_picta_bellii
ENSDNOG00000014978	SNRNP48	84	30.796	ENSCING00000004121	-	93	30.968	Ciona_intestinalis
ENSDNOG00000014978	SNRNP48	100	90.882	ENSCANG00000030017	SNRNP48	100	90.882	Colobus_angolensis_palliatus
ENSDNOG00000014978	SNRNP48	99	86.866	ENSCGRG00001001076	-	99	86.269	Cricetulus_griseus_chok1gshd
ENSDNOG00000014978	SNRNP48	97	68.882	ENSCGRG00001008805	-	93	66.767	Cricetulus_griseus_chok1gshd
ENSDNOG00000014978	SNRNP48	99	86.866	ENSCGRG00000007781	Snrnp48	99	86.269	Cricetulus_griseus_crigri
ENSDNOG00000014978	SNRNP48	91	38.889	ENSCSEG00000000722	snrnp48	73	48.699	Cynoglossus_semilaevis
ENSDNOG00000014978	SNRNP48	93	44.785	ENSCVAG00000019829	snrnp48	93	41.417	Cyprinodon_variegatus
ENSDNOG00000014978	SNRNP48	85	42.735	ENSDARG00000039989	snrnp48	83	45.017	Danio_rerio
ENSDNOG00000014978	SNRNP48	99	85.251	ENSDORG00000015140	Snrnp48	100	85.000	Dipodomys_ordii
ENSDNOG00000014978	SNRNP48	98	91.916	ENSEASG00005012021	SNRNP48	99	91.642	Equus_asinus_asinus
ENSDNOG00000014978	SNRNP48	99	92.537	ENSECAG00000026937	SNRNP48	99	92.537	Equus_caballus
ENSDNOG00000014978	SNRNP48	100	68.622	ENSEEUG00000015437	SNRNP48	99	66.862	Erinaceus_europaeus
ENSDNOG00000014978	SNRNP48	87	46.382	ENSELUG00000009766	snrnp48	77	47.518	Esox_lucius
ENSDNOG00000014978	SNRNP48	100	91.765	ENSFCAG00000018853	SNRNP48	100	91.765	Felis_catus
ENSDNOG00000014978	SNRNP48	83	64.626	ENSFALG00000007797	SNRNP48	93	64.626	Ficedula_albicollis
ENSDNOG00000014978	SNRNP48	99	86.136	ENSFDAG00000009231	SNRNP48	100	85.882	Fukomys_damarensis
ENSDNOG00000014978	SNRNP48	59	54.950	ENSFHEG00000014647	snrnp48	97	44.781	Fundulus_heteroclitus
ENSDNOG00000014978	SNRNP48	87	37.500	ENSGMOG00000018599	-	81	47.015	Gadus_morhua
ENSDNOG00000014978	SNRNP48	78	64.982	ENSGALG00000013005	SNRNP48	85	65.613	Gallus_gallus
ENSDNOG00000014978	SNRNP48	81	41.880	ENSGAFG00000021639	snrnp48	80	46.316	Gambusia_affinis
ENSDNOG00000014978	SNRNP48	81	43.750	ENSGACG00000017756	-	84	46.713	Gasterosteus_aculeatus
ENSDNOG00000014978	SNRNP48	84	63.907	ENSGAGG00000000865	SNRNP48	97	63.907	Gopherus_agassizii
ENSDNOG00000014978	SNRNP48	100	90.882	ENSGGOG00000013220	SNRNP48	100	90.882	Gorilla_gorilla
ENSDNOG00000014978	SNRNP48	98	42.815	ENSHBUG00000017066	snrnp48	97	41.989	Haplochromis_burtoni
ENSDNOG00000014978	SNRNP48	99	87.316	ENSHGLG00000015241	SNRNP48	100	87.059	Heterocephalus_glaber_female
ENSDNOG00000014978	SNRNP48	99	87.316	ENSHGLG00100010027	SNRNP48	100	87.059	Heterocephalus_glaber_male
ENSDNOG00000014978	SNRNP48	87	36.667	ENSHCOG00000014066	snrnp48	80	44.406	Hippocampus_comes
ENSDNOG00000014978	SNRNP48	100	91.176	ENSSTOG00000014635	SNRNP48	100	91.176	Ictidomys_tridecemlineatus
ENSDNOG00000014978	SNRNP48	100	82.941	ENSJJAG00000011495	Snrnp48	100	82.941	Jaculus_jaculus
ENSDNOG00000014978	SNRNP48	90	44.373	ENSKMAG00000016514	snrnp48	80	46.667	Kryptolebias_marmoratus
ENSDNOG00000014978	SNRNP48	92	43.411	ENSLBEG00000026249	snrnp48	97	41.808	Labrus_bergylta
ENSDNOG00000014978	SNRNP48	96	53.731	ENSLACG00000003958	SNRNP48	98	52.326	Latimeria_chalumnae
ENSDNOG00000014978	SNRNP48	93	43.511	ENSLOCG00000004187	snrnp48	95	48.225	Lepisosteus_oculatus
ENSDNOG00000014978	SNRNP48	100	90.000	ENSLAFG00000011152	SNRNP48	100	90.000	Loxodonta_africana
ENSDNOG00000014978	SNRNP48	100	91.176	ENSMFAG00000045216	SNRNP48	100	91.176	Macaca_fascicularis
ENSDNOG00000014978	SNRNP48	100	91.176	ENSMMUG00000014785	SNRNP48	100	91.176	Macaca_mulatta
ENSDNOG00000014978	SNRNP48	100	91.176	ENSMNEG00000042269	SNRNP48	100	91.176	Macaca_nemestrina
ENSDNOG00000014978	SNRNP48	100	91.176	ENSMLEG00000034004	SNRNP48	100	91.176	Mandrillus_leucophaeus
ENSDNOG00000014978	SNRNP48	86	42.373	ENSMAMG00000018673	snrnp48	71	48.070	Mastacembelus_armatus
ENSDNOG00000014978	SNRNP48	82	64.626	ENSMGAG00000006037	SNRNP48	99	64.384	Meleagris_gallopavo
ENSDNOG00000014978	SNRNP48	99	87.164	ENSMAUG00000011944	Snrnp48	99	86.567	Mesocricetus_auratus
ENSDNOG00000014978	SNRNP48	100	88.529	ENSMICG00000012497	SNRNP48	100	88.529	Microcebus_murinus
ENSDNOG00000014978	SNRNP48	99	86.567	ENSMOCG00000015555	Snrnp48	99	85.970	Microtus_ochrogaster
ENSDNOG00000014978	SNRNP48	54	51.852	ENSMMOG00000003072	-	58	51.852	Mola_mola
ENSDNOG00000014978	SNRNP48	97	73.314	ENSMODG00000009996	SNRNP48	92	73.314	Monodelphis_domestica
ENSDNOG00000014978	SNRNP48	91	44.444	ENSMALG00000005725	snrnp48	82	47.766	Monopterus_albus
ENSDNOG00000014978	SNRNP48	99	86.269	MGP_CAROLIEiJ_G0018441	Snrnp48	99	86.269	Mus_caroli
ENSDNOG00000014978	SNRNP48	100	85.000	ENSMUSG00000021431	Snrnp48	100	85.000	Mus_musculus
ENSDNOG00000014978	SNRNP48	99	85.672	MGP_PahariEiJ_G0019509	Snrnp48	99	85.672	Mus_pahari
ENSDNOG00000014978	SNRNP48	99	85.672	MGP_SPRETEiJ_G0019321	Snrnp48	99	85.672	Mus_spretus
ENSDNOG00000014978	SNRNP48	98	87.126	ENSNGAG00000004849	Snrnp48	98	87.126	Nannospalax_galili
ENSDNOG00000014978	SNRNP48	98	42.815	ENSNBRG00000012127	snrnp48	97	41.713	Neolamprologus_brichardi
ENSDNOG00000014978	SNRNP48	100	91.176	ENSNLEG00000011667	SNRNP48	100	91.176	Nomascus_leucogenys
ENSDNOG00000014978	SNRNP48	99	73.723	ENSOPRG00000015471	SNRNP48	100	76.543	Ochotona_princeps
ENSDNOG00000014978	SNRNP48	99	71.812	ENSODEG00000005816	-	95	71.812	Octodon_degus
ENSDNOG00000014978	SNRNP48	92	40.310	ENSONIG00000001520	snrnp48	84	46.128	Oreochromis_niloticus
ENSDNOG00000014978	SNRNP48	96	61.644	ENSOANG00000019888	-	100	66.827	Ornithorhynchus_anatinus
ENSDNOG00000014978	SNRNP48	84	89.895	ENSOCUG00000005168	SNRNP48	100	88.525	Oryctolagus_cuniculus
ENSDNOG00000014978	SNRNP48	87	47.697	ENSORLG00000015654	snrnp48	84	47.635	Oryzias_latipes
ENSDNOG00000014978	SNRNP48	89	46.178	ENSORLG00020015976	snrnp48	71	47.297	Oryzias_latipes_hni
ENSDNOG00000014978	SNRNP48	89	46.815	ENSORLG00015022379	snrnp48	72	47.973	Oryzias_latipes_hsok
ENSDNOG00000014978	SNRNP48	92	41.085	ENSOMEG00000022007	snrnp48	84	47.458	Oryzias_melastigma
ENSDNOG00000014978	SNRNP48	93	87.658	ENSOGAG00000005275	SNRNP48	97	87.578	Otolemur_garnettii
ENSDNOG00000014978	SNRNP48	84	87.108	ENSOARG00000017319	SNRNP48	100	87.108	Ovis_aries
ENSDNOG00000014978	SNRNP48	100	91.176	ENSPPAG00000032873	SNRNP48	100	91.176	Pan_paniscus
ENSDNOG00000014978	SNRNP48	100	91.765	ENSPPRG00000004283	SNRNP48	100	91.765	Panthera_pardus
ENSDNOG00000014978	SNRNP48	84	93.380	ENSPTIG00000013502	SNRNP48	100	93.380	Panthera_tigris_altaica
ENSDNOG00000014978	SNRNP48	100	91.176	ENSPTRG00000017703	SNRNP48	100	91.176	Pan_troglodytes
ENSDNOG00000014978	SNRNP48	100	91.176	ENSPANG00000000771	SNRNP48	100	91.176	Papio_anubis
ENSDNOG00000014978	SNRNP48	94	44.669	ENSPKIG00000013703	snrnp48	59	48.780	Paramormyrops_kingsleyae
ENSDNOG00000014978	SNRNP48	84	62.914	ENSPSIG00000002213	SNRNP48	95	62.333	Pelodiscus_sinensis
ENSDNOG00000014978	SNRNP48	76	46.591	ENSPMGG00000008120	snrnp48	92	46.591	Periophthalmus_magnuspinnatus
ENSDNOG00000014978	SNRNP48	99	87.164	ENSPEMG00000008872	Snrnp48	99	86.567	Peromyscus_maniculatus_bairdii
ENSDNOG00000014978	SNRNP48	81	44.643	ENSPFOG00000003578	snrnp48	80	47.500	Poecilia_formosa
ENSDNOG00000014978	SNRNP48	81	44.643	ENSPLAG00000002290	snrnp48	76	49.780	Poecilia_latipinna
ENSDNOG00000014978	SNRNP48	81	42.857	ENSPMEG00000018033	snrnp48	80	46.786	Poecilia_mexicana
ENSDNOG00000014978	SNRNP48	81	42.857	ENSPREG00000018541	snrnp48	80	47.500	Poecilia_reticulata
ENSDNOG00000014978	SNRNP48	100	89.706	ENSPPYG00000016209	SNRNP48	100	89.706	Pongo_abelii
ENSDNOG00000014978	SNRNP48	96	75.758	ENSPCAG00000011991	SNRNP48	98	71.212	Procavia_capensis
ENSDNOG00000014978	SNRNP48	100	90.000	ENSPVAG00000002854	SNRNP48	100	90.000	Pteropus_vampyrus
ENSDNOG00000014978	SNRNP48	92	41.085	ENSPNYG00000015399	snrnp48	92	46.980	Pundamilia_nyererei
ENSDNOG00000014978	SNRNP48	99	86.866	ENSRNOG00000013756	Snrnp48	99	86.866	Rattus_norvegicus
ENSDNOG00000014978	SNRNP48	100	88.276	ENSRBIG00000043856	SNRNP48	97	91.803	Rhinopithecus_bieti
ENSDNOG00000014978	SNRNP48	100	90.882	ENSRROG00000043229	SNRNP48	100	90.882	Rhinopithecus_roxellana
ENSDNOG00000014978	SNRNP48	100	90.588	ENSSBOG00000019486	SNRNP48	100	90.588	Saimiri_boliviensis_boliviensis
ENSDNOG00000014978	SNRNP48	99	73.487	ENSSHAG00000014483	SNRNP48	99	73.487	Sarcophilus_harrisii
ENSDNOG00000014978	SNRNP48	98	36.879	ENSSFOG00015006610	snrnp48	71	47.386	Scleropages_formosus
ENSDNOG00000014978	SNRNP48	87	44.631	ENSSDUG00000014953	snrnp48	95	41.691	Seriola_dumerili
ENSDNOG00000014978	SNRNP48	81	46.831	ENSSLDG00000005989	snrnp48	95	41.983	Seriola_lalandi_dorsalis
ENSDNOG00000014978	SNRNP48	84	66.779	ENSSPUG00000006257	SNRNP48	85	66.779	Sphenodon_punctatus
ENSDNOG00000014978	SNRNP48	94	43.293	ENSSPAG00000006454	snrnp48	93	42.433	Stegastes_partitus
ENSDNOG00000014978	SNRNP48	83	63.574	ENSTGUG00000007575	SNRNP48	93	63.574	Taeniopygia_guttata
ENSDNOG00000014978	SNRNP48	87	42.500	ENSTRUG00000007031	snrnp48	82	49.117	Takifugu_rubripes
ENSDNOG00000014978	SNRNP48	81	38.393	ENSTNIG00000012977	-	72	46.774	Tetraodon_nigroviridis
ENSDNOG00000014978	SNRNP48	99	86.029	ENSTBEG00000015620	SNRNP48	100	73.824	Tupaia_belangeri
ENSDNOG00000014978	SNRNP48	99	90.746	ENSTTRG00000016715	SNRNP48	99	90.746	Tursiops_truncatus
ENSDNOG00000014978	SNRNP48	100	90.588	ENSUAMG00000003690	SNRNP48	100	90.588	Ursus_americanus
ENSDNOG00000014978	SNRNP48	84	87.108	ENSVPAG00000003557	SNRNP48	100	87.108	Vicugna_pacos
ENSDNOG00000014978	SNRNP48	99	90.855	ENSVVUG00000004996	SNRNP48	98	91.642	Vulpes_vulpes
ENSDNOG00000014978	SNRNP48	86	53.618	ENSXETG00000020447	snrnp48	97	51.462	Xenopus_tropicalis
ENSDNOG00000014978	SNRNP48	81	43.750	ENSXCOG00000004478	snrnp48	68	49.561	Xiphophorus_couchianus
ENSDNOG00000014978	SNRNP48	81	48.014	ENSXMAG00000013595	snrnp48	75	48.375	Xiphophorus_maculatus