EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000015998 (Gene tree)
Gene ID: 101417144
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 19562 bases
Position: chrJH568484.1:1016311-1035872
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000033823	MBD	PF01429.19	3.3e-16	1	1
ENSDNOP00000012409	MBD	PF01429.19	3.3e-16	1	1
ENSDNOP00000029856	MBD	PF01429.19	3.4e-16	1	1
ENSDNOP00000020244	MBD	PF01429.19	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000044128	MBD1-204	1905	-	ENSDNOP00000020244	634 (aa)	-	UPI0003CC1545
ENSDNOT00000034232	MBD1-201	1903	-	ENSDNOP00000029856	625 (aa)	-	UPI0003CBDF1A
ENSDNOT00000016000	MBD1-203	1870	-	ENSDNOP00000012409	614 (aa)	-	UPI0003CC0B7E
ENSDNOT00000037289	MBD1-202	1834	-	ENSDNOP00000033823	602 (aa)	-	UPI0003CC021B

Gene Model

Click here to download ENSDNOG00000015998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000015998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000015998	MBD1	100	83.518	ENSG00000141644	MBD1	100	82.250	Homo_sapiens
ENSDNOG00000015998	MBD1	100	82.753	ENSAMEG00000000238	MBD1	96	81.804	Ailuropoda_melanoleuca
ENSDNOG00000015998	MBD1	71	40.351	ENSACAG00000006091	-	100	42.657	Anolis_carolinensis
ENSDNOG00000015998	MBD1	100	83.043	ENSANAG00000036253	MBD1	100	80.983	Aotus_nancymaae
ENSDNOG00000015998	MBD1	100	82.965	ENSBTAG00000003801	MBD1	100	80.854	Bos_taurus
ENSDNOG00000015998	MBD1	100	81.804	ENSCJAG00000004959	MBD1	100	79.782	Callithrix_jacchus
ENSDNOG00000015998	MBD1	100	82.092	ENSCAFG00000018928	MBD1	96	80.983	Canis_familiaris
ENSDNOG00000015998	MBD1	100	82.399	ENSCAFG00020024272	MBD1	100	81.308	Canis_lupus_dingo
ENSDNOG00000015998	MBD1	100	82.808	ENSCHIG00000021134	MBD1	100	81.487	Capra_hircus
ENSDNOG00000015998	MBD1	100	81.458	ENSTSYG00000000509	MBD1	100	79.239	Carlito_syrichta
ENSDNOG00000015998	MBD1	100	59.128	ENSCAPG00000015782	MBD1	100	67.681	Cavia_aperea
ENSDNOG00000015998	MBD1	100	69.072	ENSCPOG00000001671	MBD1	96	67.747	Cavia_porcellus
ENSDNOG00000015998	MBD1	100	76.672	ENSCCAG00000034600	MBD1	100	71.157	Cebus_capucinus
ENSDNOG00000015998	MBD1	100	83.677	ENSCATG00000029959	MBD1	100	82.409	Cercocebus_atys
ENSDNOG00000015998	MBD1	100	79.715	ENSCLAG00000007457	MBD1	89	78.288	Chinchilla_lanigera
ENSDNOG00000015998	MBD1	100	80.349	ENSCSAG00000018070	MBD1	100	79.081	Chlorocebus_sabaeus
ENSDNOG00000015998	MBD1	100	83.360	ENSCANG00000033425	MBD1	100	82.092	Colobus_angolensis_palliatus
ENSDNOG00000015998	MBD1	100	68.372	ENSCGRG00001014843	Mbd1	100	67.757	Cricetulus_griseus_chok1gshd
ENSDNOG00000015998	MBD1	92	78.222	ENSCGRG00000014135	Mbd1	92	78.222	Cricetulus_griseus_crigri
ENSDNOG00000015998	MBD1	100	64.773	ENSDORG00000013917	Mbd1	100	71.307	Dipodomys_ordii
ENSDNOG00000015998	MBD1	100	84.399	ENSEASG00005003857	MBD1	100	83.463	Equus_asinus_asinus
ENSDNOG00000015998	MBD1	100	84.243	ENSECAG00000011497	MBD1	78	87.931	Equus_caballus
ENSDNOG00000015998	MBD1	100	83.515	ENSFCAG00000015730	MBD1	100	82.278	Felis_catus
ENSDNOG00000015998	MBD1	90	77.841	ENSFDAG00000011085	MBD1	97	77.841	Fukomys_damarensis
ENSDNOG00000015998	MBD1	52	52.308	ENSGAFG00000008975	mbd1b	50	33.523	Gambusia_affinis
ENSDNOG00000015998	MBD1	100	83.518	ENSGGOG00000016966	MBD1	100	82.250	Gorilla_gorilla
ENSDNOG00000015998	MBD1	100	80.190	ENSHGLG00000008740	MBD1	100	77.971	Heterocephalus_glaber_female
ENSDNOG00000015998	MBD1	90	86.538	ENSHGLG00100005198	MBD1	100	88.411	Heterocephalus_glaber_male
ENSDNOG00000015998	MBD1	100	73.926	ENSSTOG00000007780	MBD1	100	72.546	Ictidomys_tridecemlineatus
ENSDNOG00000015998	MBD1	100	62.359	ENSJJAG00000022859	Mbd1	100	61.874	Jaculus_jaculus
ENSDNOG00000015998	MBD1	72	34.858	ENSLACG00000002414	-	52	65.574	Latimeria_chalumnae
ENSDNOG00000015998	MBD1	100	70.124	ENSLAFG00000031328	MBD1	100	70.279	Loxodonta_africana
ENSDNOG00000015998	MBD1	100	83.994	ENSMFAG00000026335	MBD1	100	82.726	Macaca_fascicularis
ENSDNOG00000015998	MBD1	100	83.994	ENSMMUG00000009050	MBD1	100	82.726	Macaca_mulatta
ENSDNOG00000015998	MBD1	100	83.994	ENSMNEG00000038822	MBD1	100	82.726	Macaca_nemestrina
ENSDNOG00000015998	MBD1	100	83.677	ENSMLEG00000043121	MBD1	100	82.409	Mandrillus_leucophaeus
ENSDNOG00000015998	MBD1	100	81.013	ENSMICG00000006414	MBD1	100	80.854	Microcebus_murinus
ENSDNOG00000015998	MBD1	72	44.000	ENSMODG00000001286	-	57	41.439	Monodelphis_domestica
ENSDNOG00000015998	MBD1	100	61.516	ENSMUSG00000024561	Mbd1	89	70.934	Mus_musculus
ENSDNOG00000015998	MBD1	100	60.213	MGP_PahariEiJ_G0019128	Mbd1	90	71.886	Mus_pahari
ENSDNOG00000015998	MBD1	98	61.526	MGP_SPRETEiJ_G0023304	Mbd1	99	59.346	Mus_spretus
ENSDNOG00000015998	MBD1	100	82.567	ENSMPUG00000008843	MBD1	96	81.616	Mustela_putorius_furo
ENSDNOG00000015998	MBD1	100	82.250	ENSMLUG00000008286	MBD1	96	80.824	Myotis_lucifugus
ENSDNOG00000015998	MBD1	100	62.875	ENSNGAG00000011412	Mbd1	100	61.796	Nannospalax_galili
ENSDNOG00000015998	MBD1	100	82.567	ENSNLEG00000011661	-	100	81.300	Nomascus_leucogenys
ENSDNOG00000015998	MBD1	98	66.169	ENSNLEG00000032711	-	85	70.968	Nomascus_leucogenys
ENSDNOG00000015998	MBD1	100	67.778	ENSOPRG00000007647	MBD1	100	66.508	Ochotona_princeps
ENSDNOG00000015998	MBD1	100	64.852	ENSODEG00000018451	MBD1	100	71.733	Octodon_degus
ENSDNOG00000015998	MBD1	89	44.728	ENSOANG00000014593	-	100	43.925	Ornithorhynchus_anatinus
ENSDNOG00000015998	MBD1	100	80.824	ENSOCUG00000006554	MBD1	100	80.666	Oryctolagus_cuniculus
ENSDNOG00000015998	MBD1	100	80.156	ENSOGAG00000003784	MBD1	96	79.375	Otolemur_garnettii
ENSDNOG00000015998	MBD1	100	82.677	ENSOARG00000004218	MBD1	95	81.359	Ovis_aries
ENSDNOG00000015998	MBD1	100	80.032	ENSPPAG00000038886	MBD1	100	77.813	Pan_paniscus
ENSDNOG00000015998	MBD1	100	83.386	ENSPPRG00000021387	MBD1	100	82.437	Panthera_pardus
ENSDNOG00000015998	MBD1	100	83.544	ENSPTIG00000021231	MBD1	100	82.437	Panthera_tigris_altaica
ENSDNOG00000015998	MBD1	100	83.360	ENSPTRG00000010021	MBD1	100	82.092	Pan_troglodytes
ENSDNOG00000015998	MBD1	100	83.518	ENSPANG00000010867	MBD1	100	82.250	Papio_anubis
ENSDNOG00000015998	MBD1	100	56.378	ENSPEMG00000022630	Mbd1	89	68.327	Peromyscus_maniculatus_bairdii
ENSDNOG00000015998	MBD1	96	45.238	ENSPCIG00000027937	-	79	44.588	Phascolarctos_cinereus
ENSDNOG00000015998	MBD1	100	80.032	ENSPPYG00000009158	MBD1	91	77.813	Pongo_abelii
ENSDNOG00000015998	MBD1	99	71.224	ENSPCAG00000001648	MBD1	93	86.742	Procavia_capensis
ENSDNOG00000015998	MBD1	100	81.458	ENSPCOG00000012450	MBD1	100	82.955	Propithecus_coquereli
ENSDNOG00000015998	MBD1	100	48.333	ENSRNOG00000024104	Mbd1	89	69.710	Rattus_norvegicus
ENSDNOG00000015998	MBD1	100	76.862	ENSRBIG00000041294	MBD1	100	75.594	Rhinopithecus_bieti
ENSDNOG00000015998	MBD1	100	83.360	ENSRROG00000032517	MBD1	100	82.092	Rhinopithecus_roxellana
ENSDNOG00000015998	MBD1	100	81.804	ENSSBOG00000027169	MBD1	100	74.010	Saimiri_boliviensis_boliviensis
ENSDNOG00000015998	MBD1	83	41.386	ENSSHAG00000003661	-	100	43.388	Sarcophilus_harrisii
ENSDNOG00000015998	MBD1	63	52.128	ENSSPAG00000021447	mbd1b	51	59.155	Stegastes_partitus
ENSDNOG00000015998	MBD1	100	84.168	ENSSSCG00000004516	MBD1	100	82.876	Sus_scrofa
ENSDNOG00000015998	MBD1	65	71.967	ENSTBEG00000012651	-	68	71.901	Tupaia_belangeri
ENSDNOG00000015998	MBD1	100	76.266	ENSTTRG00000015523	MBD1	100	76.266	Tursiops_truncatus
ENSDNOG00000015998	MBD1	100	83.065	ENSUAMG00000004752	MBD1	100	81.935	Ursus_americanus
ENSDNOG00000015998	MBD1	99	81.717	ENSUMAG00000002947	MBD1	100	78.915	Ursus_maritimus